| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is ilvE [H]
Identifier: 197116969
GI number: 197116969
Start: 694786
End: 695856
Strand: Reverse
Name: ilvE [H]
Synonym: Gbem_0572
Alternate gene names: 197116969
Gene position: 695856-694786 (Counterclockwise)
Preceding gene: 197116971
Following gene: 197116967
Centisome position: 15.08
GC content: 60.69
Gene sequence:
>1071_bases ATGGAAATCAGGATAGTGCCCCTCAGCGAGGGGGAGAAAAAGGCGAAATTCAAAGACGAATCACAGCTTGGCTTTGGCAA GATTTTCACCGACCGCATGCTTTTGATCGAGTGGAAGGTCGGCCAGGGGTGGGTAGATGCCAGGATCAAGAAGTACGAGC CGTTCCAGCTCGACCCGGCGGCGCTCGTGTTGCATTATGCCCAGGAAATCTTCGAAGGGCTCAAGGCCTACAGGTGGAAG GACGGCACCATTGCTCTCTTCCGTCCCGAGATGAACGCCCGCCGCTTCAACCACTCAGCGGACCGGCTCTGCATGCCCGA GATCCCCGAGGAACTCTTTGTAAGCGGCATCGAGCAGTTGGTGGCCGCCGAGCGCGAATGGGTCCCCGGCGCCGAAGGGA CCTCCCTCTACATCCGCCCCGCCATGATCGCCGTGGAGCCGCATGTCGGCATCAAGCCTTCGGACCACTACTACTTCTAC GTGATTCTCTCCCCGGTCGGCGCCTACTACGCCAACGGCTTCAATCCCGTGAAGATCATGGTGGAGGACCATTACGTGAG GGCAACCCCGGGCGGCACCGGCGAGGCCAAGACCGGCGGCAACTACGCCAGCTCGCTCAAGGCGGGACTCGAGGCCAAGA AGAAAGGGTTCGACCAGGTGCTCTGGCTGGACGGCGTCCACAAGCGTTACATCGAGGAAGTCGGCTCGATGAACATGTTC TTTGCCTACGGCGACACCATCGTCACCGCGCCGCTTGAAGGAAGCATACTCAACGGCATCACCCGTGACTCGGTGCTGAC CCTGGCCAAGTCGTTGAACCTGAAGGTCGAGGAGCGGCGCATAGACGTCAACGACCTGATGGCGGATCTGAAAAGCGGGA AGATCACCGAGGCATTCGGCAGCGGCACCGCCGCGGTGGTAACCCCGGTCGGTACCCTGAGCTACGCCGGCGATACGGTC CAGGTGGGCAACGGCGGCGTAGGGAAATACACCCAGGTGCTCTACGACACGCTGACCGGGATCCAGACCGGCAAGATCGA AGACCGATTCGGCTGGATCAGGAAGATCTAG
Upstream 100 bases:
>100_bases TGCGGCGGGTTAAATTGCTTGCGCCCCCTATCCTGAATATGGTAAACGAAAAGATCGAATAAAAGCGACGCCTGGCGCCG AAAACCGGAGGTTCTGCCAC
Downstream 100 bases:
>100_bases CCTCAAAAACAGGATGGCCGCGCGGGTGATTCCCGCGCGGCCATCGTCATTTATAAGAAGAAGAGCTGCCCCCCTCCTGC TGCTGTGCCCAAACGCAACT
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT 2; Vegetative protein 85; VEG85 [H]
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MEIRIVPLSEGEKKAKFKDESQLGFGKIFTDRMLLIEWKVGQGWVDARIKKYEPFQLDPAALVLHYAQEIFEGLKAYRWK DGTIALFRPEMNARRFNHSADRLCMPEIPEELFVSGIEQLVAAEREWVPGAEGTSLYIRPAMIAVEPHVGIKPSDHYYFY VILSPVGAYYANGFNPVKIMVEDHYVRATPGGTGEAKTGGNYASSLKAGLEAKKKGFDQVLWLDGVHKRYIEEVGSMNMF FAYGDTIVTAPLEGSILNGITRDSVLTLAKSLNLKVEERRIDVNDLMADLKSGKITEAFGSGTAAVVTPVGTLSYAGDTV QVGNGGVGKYTQVLYDTLTGIQTGKIEDRFGWIRKI
Sequences:
>Translated_356_residues MEIRIVPLSEGEKKAKFKDESQLGFGKIFTDRMLLIEWKVGQGWVDARIKKYEPFQLDPAALVLHYAQEIFEGLKAYRWK DGTIALFRPEMNARRFNHSADRLCMPEIPEELFVSGIEQLVAAEREWVPGAEGTSLYIRPAMIAVEPHVGIKPSDHYYFY VILSPVGAYYANGFNPVKIMVEDHYVRATPGGTGEAKTGGNYASSLKAGLEAKKKGFDQVLWLDGVHKRYIEEVGSMNMF FAYGDTIVTAPLEGSILNGITRDSVLTLAKSLNLKVEERRIDVNDLMADLKSGKITEAFGSGTAAVVTPVGTLSYAGDTV QVGNGGVGKYTQVLYDTLTGIQTGKIEDRFGWIRKI >Mature_356_residues MEIRIVPLSEGEKKAKFKDESQLGFGKIFTDRMLLIEWKVGQGWVDARIKKYEPFQLDPAALVLHYAQEIFEGLKAYRWK DGTIALFRPEMNARRFNHSADRLCMPEIPEELFVSGIEQLVAAEREWVPGAEGTSLYIRPAMIAVEPHVGIKPSDHYYFY VILSPVGAYYANGFNPVKIMVEDHYVRATPGGTGEAKTGGNYASSLKAGLEAKKKGFDQVLWLDGVHKRYIEEVGSMNMF FAYGDTIVTAPLEGSILNGITRDSVLTLAKSLNLKVEERRIDVNDLMADLKSGKITEAFGSGTAAVVTPVGTLSYAGDTV QVGNGGVGKYTQVLYDTLTGIQTGKIEDRFGWIRKI
Specific function: Transaminates branched-chain amino acids and ketoglutarate [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI296010904, Length=337, Percent_Identity=43.3234421364985, Blast_Score=263, Evalue=2e-70, Organism=Homo sapiens, GI296010906, Length=337, Percent_Identity=43.3234421364985, Blast_Score=263, Evalue=3e-70, Organism=Homo sapiens, GI38176287, Length=337, Percent_Identity=43.3234421364985, Blast_Score=262, Evalue=3e-70, Organism=Homo sapiens, GI50658084, Length=307, Percent_Identity=40.3908794788274, Blast_Score=238, Evalue=4e-63, Organism=Homo sapiens, GI296010902, Length=340, Percent_Identity=37.9411764705882, Blast_Score=215, Evalue=5e-56, Organism=Homo sapiens, GI296010900, Length=340, Percent_Identity=37.9411764705882, Blast_Score=215, Evalue=5e-56, Organism=Homo sapiens, GI258614015, Length=261, Percent_Identity=39.463601532567, Blast_Score=197, Evalue=1e-50, Organism=Escherichia coli, GI48994963, Length=318, Percent_Identity=31.7610062893082, Blast_Score=136, Evalue=3e-33, Organism=Caenorhabditis elegans, GI17568601, Length=358, Percent_Identity=38.268156424581, Blast_Score=246, Evalue=9e-66, Organism=Caenorhabditis elegans, GI17565728, Length=345, Percent_Identity=36.8115942028986, Blast_Score=206, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6322608, Length=355, Percent_Identity=40.5633802816901, Blast_Score=276, Evalue=4e-75, Organism=Saccharomyces cerevisiae, GI6322002, Length=353, Percent_Identity=40.2266288951841, Blast_Score=265, Evalue=9e-72, Organism=Drosophila melanogaster, GI24641779, Length=343, Percent_Identity=41.399416909621, Blast_Score=254, Evalue=7e-68,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005786 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 39489; Mature: 39489
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIRIVPLSEGEKKAKFKDESQLGFGKIFTDRMLLIEWKVGQGWVDARIKKYEPFQLDPA CEEEEEECCCCCCCCCCCCCCCCCCCCEECCCEEEEEEECCCCCCCCCCCCCCCCCCCHH ALVLHYAQEIFEGLKAYRWKDGTIALFRPEMNARRFNHSADRLCMPEIPEELFVSGIEQL HHHHHHHHHHHHHHHHEECCCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHH VAAEREWVPGAEGTSLYIRPAMIAVEPHVGIKPSDHYYFYVILSPVGAYYANGFNPVKIM HHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEECCHHHHHHCCCCEEEEE VEDHYVRATPGGTGEAKTGGNYASSLKAGLEAKKKGFDQVLWLDGVHKRYIEEVGSMNMF EECCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCEEE FAYGDTIVTAPLEGSILNGITRDSVLTLAKSLNLKVEERRIDVNDLMADLKSGKITEAFG EEECCEEEECCCCCHHHCCCCHHHHHHHHHHCCCEEHHHCCCHHHHHHHHCCCCEEEHHC SGTAAVVTPVGTLSYAGDTVQVGNGGVGKYTQVLYDTLTGIQTGKIEDRFGWIRKI CCCEEEEECCCHHEECCCEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCC >Mature Secondary Structure MEIRIVPLSEGEKKAKFKDESQLGFGKIFTDRMLLIEWKVGQGWVDARIKKYEPFQLDPA CEEEEEECCCCCCCCCCCCCCCCCCCCEECCCEEEEEEECCCCCCCCCCCCCCCCCCCHH ALVLHYAQEIFEGLKAYRWKDGTIALFRPEMNARRFNHSADRLCMPEIPEELFVSGIEQL HHHHHHHHHHHHHHHHEECCCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHH VAAEREWVPGAEGTSLYIRPAMIAVEPHVGIKPSDHYYFYVILSPVGAYYANGFNPVKIM HHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEECCHHHHHHCCCCEEEEE VEDHYVRATPGGTGEAKTGGNYASSLKAGLEAKKKGFDQVLWLDGVHKRYIEEVGSMNMF EECCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCEEE FAYGDTIVTAPLEGSILNGITRDSVLTLAKSLNLKVEERRIDVNDLMADLKSGKITEAFG EEECCEEEECCCCCHHHCCCCHHHHHHHHHHCCCEEHHHCCCHHHHHHHHCCCCEEEHHC SGTAAVVTPVGTLSYAGDTVQVGNGGVGKYTQVLYDTLTGIQTGKIEDRFGWIRKI CCCEEEEECCCHHEECCCEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 7934828; 9298659 [H]