Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116779

Identifier: 197116779

GI number: 197116779

Start: 457840

End: 458673

Strand: Direct

Name: 197116779

Synonym: Gbem_0381

Alternate gene names: NA

Gene position: 457840-458673 (Clockwise)

Preceding gene: 197116775

Following gene: 197116781

Centisome position: 9.92

GC content: 58.51

Gene sequence:

>834_bases
ATGAAAAAATTAATGGTGATTGTAACGCTCCTTGTCACGTCACTTCTGTTCGGCTGTGGCGGAGGAGGAGGCGGCAGCGG
CAGCAGCAGTAATAATAATAATAGCGATACCGCCAGTAACAGCGCCGACAGCGGAACCGGAGGTAGCACCGGCGGTACCG
CAAACCCCGCCGGCGGAACCGGTGACAGCGCTGCAGGCGCGAATGGTGGAGGCGCGGGAGACACCGGCGCCACCCCAGTC
CAGTCCCCGGCGGCGGCCATTCCGGGGGCACCGACCGAGGTCATGCTACAGCCGGGGAATGGTCAAGTCACTCTGTCCTG
GAACCCCGTTGCCGATGCCACCTCGTATAACGTCTACTGGTCTACCGCCAGTGGCGCAGCGCTCAGCCAGGGCGCGCGAA
AAACCGGCGTAGTCTCTCCTTGCTTGGTCACTGGATTGCAGAACGGTACGACTTATTACTTCGTTGTCACTGCGGCCAAT
CAATATGGAGAATCCAGGGCCTCGGCTGAAATGAGCGCCGCTCCGGCGGTGTTTTTCGTTGCAGAGATGGTAAGCGGTAA
AAGCTTCGACTACACCTTCTCCACAGGCGCAGCGGGAACCGTCAGTTTCAGCGCCGACGGAACCTTCACCGGTCAGAACT
TGAGCGTAGGAATGCCTTTAACCGGGCAGTGGGTCATCAAGGATGGCGTGTTGACCTGCGTGTACCCCGGAGGAATAACG
GAAACCCTGACGCTCATCTCGAGCACCTCCACCTCGTTCATTGTTACCTACTTCGTCACCTATGCCGACGGCAGTAGCAG
CAACAGCGTGGAGGGTACTTTCGTGATGAAATAG

Upstream 100 bases:

>100_bases
CGCGCGCCGCCTCCGCCTGGTGCTGAAGCTTTGGGGCGCCCGACTGGGACGCTTTCGACTGATGTGAAAGCATCACCGGG
TTTAACTATGGAGGTACGAG

Downstream 100 bases:

>100_bases
TAGTAACGAGCTTTGGCGGCAGTGTCATGAGGCGGTCCTGGACCGCCTTTTTTTTGAGGAGATTCCAAGCGAGGGCAAAA
AAAGGCCTCCTTGCGGAGGC

Product: fibronectin type III domain lipoprotein

Products: NA

Alternate protein names: Fibronectin Type III Domain Protein; Fibronectin Type III; Von Willebrand Factor Type D Protein; Fibronectin Type III Domain Lipoprotein; Beta-1 3-Glucanase

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKKLMVIVTLLVTSLLFGCGGGGGGSGSSSNNNNSDTASNSADSGTGGSTGGTANPAGGTGDSAAGANGGGAGDTGATPV
QSPAAAIPGAPTEVMLQPGNGQVTLSWNPVADATSYNVYWSTASGAALSQGARKTGVVSPCLVTGLQNGTTYYFVVTAAN
QYGESRASAEMSAAPAVFFVAEMVSGKSFDYTFSTGAAGTVSFSADGTFTGQNLSVGMPLTGQWVIKDGVLTCVYPGGIT
ETLTLISSTSTSFIVTYFVTYADGSSSNSVEGTFVMK

Sequences:

>Translated_277_residues
MKKLMVIVTLLVTSLLFGCGGGGGGSGSSSNNNNSDTASNSADSGTGGSTGGTANPAGGTGDSAAGANGGGAGDTGATPV
QSPAAAIPGAPTEVMLQPGNGQVTLSWNPVADATSYNVYWSTASGAALSQGARKTGVVSPCLVTGLQNGTTYYFVVTAAN
QYGESRASAEMSAAPAVFFVAEMVSGKSFDYTFSTGAAGTVSFSADGTFTGQNLSVGMPLTGQWVIKDGVLTCVYPGGIT
ETLTLISSTSTSFIVTYFVTYADGSSSNSVEGTFVMK
>Mature_277_residues
MKKLMVIVTLLVTSLLFGCGGGGGGSGSSSNNNNSDTASNSADSGTGGSTGGTANPAGGTGDSAAGANGGGAGDTGATPV
QSPAAAIPGAPTEVMLQPGNGQVTLSWNPVADATSYNVYWSTASGAALSQGARKTGVVSPCLVTGLQNGTTYYFVVTAAN
QYGESRASAEMSAAPAVFFVAEMVSGKSFDYTFSTGAAGTVSFSADGTFTGQNLSVGMPLTGQWVIKDGVLTCVYPGGIT
ETLTLISSTSTSFIVTYFVTYADGSSSNSVEGTFVMK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27370; Mature: 27370

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50853 FN3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLMVIVTLLVTSLLFGCGGGGGGSGSSSNNNNSDTASNSADSGTGGSTGGTANPAGGT
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GDSAAGANGGGAGDTGATPVQSPAAAIPGAPTEVMLQPGNGQVTLSWNPVADATSYNVYW
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEEEE
STASGAALSQGARKTGVVSPCLVTGLQNGTTYYFVVTAANQYGESRASAEMSAAPAVFFV
ECCCCCHHHCCCCCCCCCCHHHHHCCCCCCEEEEEEEECCCCCCHHHCCHHHCCCHHHHH
AEMVSGKSFDYTFSTGAAGTVSFSADGTFTGQNLSVGMPLTGQWVIKDGVLTCVYPGGIT
HHHHCCCCEEEEEECCCCEEEEECCCCEECCCCEEECCCCCCCEEEECCEEEEEECCCCH
ETLTLISSTSTSFIVTYFVTYADGSSSNSVEGTFVMK
HEEEEEECCCCEEEEEEEEEECCCCCCCCCCEEEEEC
>Mature Secondary Structure
MKKLMVIVTLLVTSLLFGCGGGGGGSGSSSNNNNSDTASNSADSGTGGSTGGTANPAGGT
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GDSAAGANGGGAGDTGATPVQSPAAAIPGAPTEVMLQPGNGQVTLSWNPVADATSYNVYW
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEEEE
STASGAALSQGARKTGVVSPCLVTGLQNGTTYYFVVTAANQYGESRASAEMSAAPAVFFV
ECCCCCHHHCCCCCCCCCCHHHHHCCCCCCEEEEEEEECCCCCCHHHCCHHHCCCHHHHH
AEMVSGKSFDYTFSTGAAGTVSFSADGTFTGQNLSVGMPLTGQWVIKDGVLTCVYPGGIT
HHHHCCCCEEEEEECCCCEEEEECCCCEECCCCEEECCCCCCCEEEECCEEEEEECCCCH
ETLTLISSTSTSFIVTYFVTYADGSSSNSVEGTFVMK
HEEEEEECCCCEEEEEEEEEECCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA