| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is 197116775
Identifier: 197116775
GI number: 197116775
Start: 453072
End: 453776
Strand: Direct
Name: 197116775
Synonym: Gbem_0377
Alternate gene names: NA
Gene position: 453072-453776 (Clockwise)
Preceding gene: 197116774
Following gene: 197116779
Centisome position: 9.82
GC content: 59.15
Gene sequence:
>705_bases GTGCCCGACAATCTCTTTATCCCGTCCGTCGACTTGAGGATCGGCTCGCTCGAGGAGTACAACCGCAGGCAGAAGGAGAA GGCCTCCTTGCGGCACGCGAAGGCGAAGCCGCGTCCCTGTATCACCATCTCGCGTGAATACGGTTGCACCGGGTACCCCA CGGCGGAACTGCTCCGGGAGCGGCTTATGCAAAGGACCGGGGATGAGTGGGTACTGATAGACAAGGCCGTGCTCGAAGAG GTGGCAAAGCGCCATAACCTTTCGGAGGAGATTCTGCAGACGCTGGGGGCGGAGAACCGTATCCTGGACGAGATACTGGC CACCTTCTCTCCGCGCTGGAAAAGCAGCTACGACTACTTCCTGCCGCTATCCCGGCATGTCGTCGCCTTGGCCGAGCAGG GTAACGTCATCATCCTAGAGCTTGGAGGTGCCATCATCTCCAGGCACATCGAAAATTCCTACCACTTCAGGCTCTTTGGT TCAGCCCACTTCAAAACGGCGACCCTCGCCAGCCGGCTCGGACTGGAAAGCGAGCCGGCGGAAAAGCTGATGCACAAGCA GCAGAAAGCCCGCGACCACTTCACCCGTGATTTCCTGAATCAGGACGACCACGATCCCGTTCTCTACGACCTGCTTTTCA ACAACGACCGCTGCCCCACCGACCGCATCGCCCATGCAATAGCCGATTTCGTACTGGCGAGGTAG
Upstream 100 bases:
>100_bases GCGCTTCATCTTTCAGCGGCAAGTGGACCTGATCCGGGAACTGAAGGAGCAGAGCTGAAGCCGCGGCGGCAAGCGAGCCT TGGCGCCAAAGGAGCAGGCC
Downstream 100 bases:
>100_bases GCCTGCGCCGGGCGGTGCGGGGGGGAGGGTGCTGCTATCGCAAGTTCGGCACCGGTAGGATCTTTTTCATCGCGGCAGCG GCGCATTCCGGACAGTAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MPDNLFIPSVDLRIGSLEEYNRRQKEKASLRHAKAKPRPCITISREYGCTGYPTAELLRERLMQRTGDEWVLIDKAVLEE VAKRHNLSEEILQTLGAENRILDEILATFSPRWKSSYDYFLPLSRHVVALAEQGNVIILELGGAIISRHIENSYHFRLFG SAHFKTATLASRLGLESEPAEKLMHKQQKARDHFTRDFLNQDDHDPVLYDLLFNNDRCPTDRIAHAIADFVLAR
Sequences:
>Translated_234_residues MPDNLFIPSVDLRIGSLEEYNRRQKEKASLRHAKAKPRPCITISREYGCTGYPTAELLRERLMQRTGDEWVLIDKAVLEE VAKRHNLSEEILQTLGAENRILDEILATFSPRWKSSYDYFLPLSRHVVALAEQGNVIILELGGAIISRHIENSYHFRLFG SAHFKTATLASRLGLESEPAEKLMHKQQKARDHFTRDFLNQDDHDPVLYDLLFNNDRCPTDRIAHAIADFVLAR >Mature_233_residues PDNLFIPSVDLRIGSLEEYNRRQKEKASLRHAKAKPRPCITISREYGCTGYPTAELLRERLMQRTGDEWVLIDKAVLEEV AKRHNLSEEILQTLGAENRILDEILATFSPRWKSSYDYFLPLSRHVVALAEQGNVIILELGGAIISRHIENSYHFRLFGS AHFKTATLASRLGLESEPAEKLMHKQQKARDHFTRDFLNQDDHDPVLYDLLFNNDRCPTDRIAHAIADFVLAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26937; Mature: 26806
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDNLFIPSVDLRIGSLEEYNRRQKEKASLRHAKAKPRPCITISREYGCTGYPTAELLRE CCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHH RLMQRTGDEWVLIDKAVLEEVAKRHNLSEEILQTLGAENRILDEILATFSPRWKSSYDYF HHHHHCCCCEEEECHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEE LPLSRHVVALAEQGNVIILELGGAIISRHIENSYHFRLFGSAHFKTATLASRLGLESEPA CCHHHHHHHEECCCCEEEEECCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCHH EKLMHKQQKARDHFTRDFLNQDDHDPVLYDLLFNNDRCPTDRIAHAIADFVLAR HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure PDNLFIPSVDLRIGSLEEYNRRQKEKASLRHAKAKPRPCITISREYGCTGYPTAELLRE CCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHH RLMQRTGDEWVLIDKAVLEEVAKRHNLSEEILQTLGAENRILDEILATFSPRWKSSYDYF HHHHHCCCCEEEECHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEE LPLSRHVVALAEQGNVIILELGGAIISRHIENSYHFRLFGSAHFKTATLASRLGLESEPA CCHHHHHHHEECCCCEEEEECCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCHH EKLMHKQQKARDHFTRDFLNQDDHDPVLYDLLFNNDRCPTDRIAHAIADFVLAR HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA