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The map label for this gene is mcp041 [H]

Identifier: 197116781

GI number: 197116781

Start: 459883

End: 461985

Strand: Direct

Name: mcp041 [H]

Synonym: Gbem_0383

Alternate gene names: 197116781

Gene position: 459883-461985 (Clockwise)

Preceding gene: 197116779

Following gene: 197116782

Centisome position: 9.96

GC content: 53.45

Gene sequence:

>2103_bases
ATGAGCATGCTTGGAAGTGGGCTTAGTACCAAAATCACCATCTGCGTGGCCGTAGCATTGATCGTTTCATTCGTTGCGAA
CATCGCGTATTTCAGCGTCAACACCCGGAATGAGGCCTACGAGGCAGTCAAATCGAAGGCCAGGGCAGTACTGCTCCAAG
CGGAAAGCTCTCGTAACTTCATGGCCTCCCTGAGAAGTAACAAAGCCTTCAACGAGGTAGAGCTAAAAAGCGCATTCGAT
GACAAACTGAAGTCTGCTACGGACAAGGTGGCCGCGGCACGGGAGACCGTTTTTTTCAACACCATCCCGATCATTGCAGC
CATGAAAATCGCAGGCGAACACGCATCTGAATCGGGTTTCAAACTCAAGGTCCCTAAGGTTCAAGCTCGGAACAAACAGA
ACGAGCCGGACAGCACCGAACTCGTACTCCTGGACAGGCTACAAAAGGAAAACCTGCCGGAATTATTCATGGTCGACAAG
GCCAGCAACGTTATTCGCTACCTGCGCCCAATCAAACTTACCGGCGAGTGTCTGGTGTGCCACGGGGTACCGTCCGACAC
ACTCAATAAGGACGGGCTCGATCTGCTTGGAATGAAAGCTGAAGGATGGAAAGCAGGTGAGCAGCATGGTGCATATGAAA
TCCTCGACGATCTTGGTGCGATCGAAACTGCCATACGGCACAAGTTGCTTGTTTCTTTTGCCATTACCTTTGTCATCACA
TTGGCGTCAATCCTGTTGCTTATATGGATGACCAAGGCTGTAATCATCAGGCCTCTCCGCACGATTGTGGTCAGAATGCA
GCAGGTAGCTGACGGCGACTTAAGCTCAGTCAGCGAAGAGTTGCGAAACGATGAGGTAGGTGAGCTGTCACGTTCAATCC
ACGGCGCCGTCGATAAAATGAGGACAACTCTGACCACGGTGCTGGAGAGCAGTTGCCATGTGGCAACAGCGGTTGGAACC
GTGTATGCGACATCCGAAGAGATCGCGATCGGCGCAGACGAGGTGGCTATACAAGCGAGCACCGTCGCGACAGCTGGGGA
GGAAATGGCTGCGACATCCTGTGATATCGCAAGCAACTGCCAGATGGCGGCAGAGGGGGCACGCGCTGCAACGGGCGAAG
CTACTGAAGGGGCTGAGATCATCCGGAGCAGCATCGACATCATGTCGCGTATTGCTGACCAGGTGCGTGCTTCAGCAAAT
ACGGTCGCAAGTTTGGGCAACAGAAGCGATCAGATCGGCGAAATCGTCGGGACTATAGAGGACATTGCCGATCAGACGAA
TCTCTTAGCCTTGAATGCCGCTATAGAAGCAGCAAGAGCTGGGGAGCAAGGCAGAGGATTTGCCGTTGTTGCCGACGAGG
TGCGCGCCCTCGCTGAACGGACCACAAGGGCTACCCATGAAATCAGTGGCATGATCAAAGCCATCCAGCAGGAGACAAAG
GATGCGGTTCAGGCAATGAACGAAGGCGTCCGGGAAGTAGAGCAAGGAACTGCGCAAGCGACCCATTCCGGTGAAGCCAT
CGAACGCATACTCAACCTGATTAACGATTTGGGAATGCAGGTCAATCAGATTGCTACTGCTGCCGAAGAACAGACAGCCA
CGACCGGCGAGATCAGCAGCAACATGACTAGAATCAACGATATCGGCAGGAGTGTCGCAGGACATGCACATACCTCTGCG
CTCCAAGCCGGTCATCTCAATGCCGGCGCTGAAGCCCTGCTGTCGTCGTTGGGCAAGTTCAAGCTCAATGAAAGTGACAG
GCTGGTGCTGCGTAAGGCAAAGAGTGCCCATATGATCTTCGTGGGAAAGATCAGGGCACATCTGCACGGGGCGCAGACGG
TTGATCATAACCTGCTGCCGACCCATCTTACCTGTGCCTTCGGCAAGTGGTATCAAGGCGACGGCCAGAGCAGTTGCGGG
CAGTTCGATTTGTTCAAAAAAATCGATGCGCCTCATGCCAAGGTACATGAGCTCGGCAAGCAGGCTATCATCGCTCATAA
CTCCGGCGACAAAGCGAAAGCGGGTCAATGCTGCGACGAAATGGTAGAAGCCTCAATGCATCTCATAGGGATCCTGGACA
ATTTGGCAGCACAATGCAAGTAA

Upstream 100 bases:

>100_bases
AAAAATAAATGAAGTTTCAAATTGCCACACCGAAGAGAGATGCAAATTCTCAGTGGCATTGGTATTCAATATATCAACTG
TGTTCGTCAAGAGGTGTGGC

Downstream 100 bases:

>100_bases
GGAACGCATAGTCAGGCATTGGAGCCCTATGTGGGGCCGGTTACAAGGCAGCAGAATGAGGCTCAAAAGCAAAATGGTCG
ATTCCTTTAAAGGAATCGGC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 700; Mature: 699

Protein sequence:

>700_residues
MSMLGSGLSTKITICVAVALIVSFVANIAYFSVNTRNEAYEAVKSKARAVLLQAESSRNFMASLRSNKAFNEVELKSAFD
DKLKSATDKVAAARETVFFNTIPIIAAMKIAGEHASESGFKLKVPKVQARNKQNEPDSTELVLLDRLQKENLPELFMVDK
ASNVIRYLRPIKLTGECLVCHGVPSDTLNKDGLDLLGMKAEGWKAGEQHGAYEILDDLGAIETAIRHKLLVSFAITFVIT
LASILLLIWMTKAVIIRPLRTIVVRMQQVADGDLSSVSEELRNDEVGELSRSIHGAVDKMRTTLTTVLESSCHVATAVGT
VYATSEEIAIGADEVAIQASTVATAGEEMAATSCDIASNCQMAAEGARAATGEATEGAEIIRSSIDIMSRIADQVRASAN
TVASLGNRSDQIGEIVGTIEDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAERTTRATHEISGMIKAIQQETK
DAVQAMNEGVREVEQGTAQATHSGEAIERILNLINDLGMQVNQIATAAEEQTATTGEISSNMTRINDIGRSVAGHAHTSA
LQAGHLNAGAEALLSSLGKFKLNESDRLVLRKAKSAHMIFVGKIRAHLHGAQTVDHNLLPTHLTCAFGKWYQGDGQSSCG
QFDLFKKIDAPHAKVHELGKQAIIAHNSGDKAKAGQCCDEMVEASMHLIGILDNLAAQCK

Sequences:

>Translated_700_residues
MSMLGSGLSTKITICVAVALIVSFVANIAYFSVNTRNEAYEAVKSKARAVLLQAESSRNFMASLRSNKAFNEVELKSAFD
DKLKSATDKVAAARETVFFNTIPIIAAMKIAGEHASESGFKLKVPKVQARNKQNEPDSTELVLLDRLQKENLPELFMVDK
ASNVIRYLRPIKLTGECLVCHGVPSDTLNKDGLDLLGMKAEGWKAGEQHGAYEILDDLGAIETAIRHKLLVSFAITFVIT
LASILLLIWMTKAVIIRPLRTIVVRMQQVADGDLSSVSEELRNDEVGELSRSIHGAVDKMRTTLTTVLESSCHVATAVGT
VYATSEEIAIGADEVAIQASTVATAGEEMAATSCDIASNCQMAAEGARAATGEATEGAEIIRSSIDIMSRIADQVRASAN
TVASLGNRSDQIGEIVGTIEDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAERTTRATHEISGMIKAIQQETK
DAVQAMNEGVREVEQGTAQATHSGEAIERILNLINDLGMQVNQIATAAEEQTATTGEISSNMTRINDIGRSVAGHAHTSA
LQAGHLNAGAEALLSSLGKFKLNESDRLVLRKAKSAHMIFVGKIRAHLHGAQTVDHNLLPTHLTCAFGKWYQGDGQSSCG
QFDLFKKIDAPHAKVHELGKQAIIAHNSGDKAKAGQCCDEMVEASMHLIGILDNLAAQCK
>Mature_699_residues
SMLGSGLSTKITICVAVALIVSFVANIAYFSVNTRNEAYEAVKSKARAVLLQAESSRNFMASLRSNKAFNEVELKSAFDD
KLKSATDKVAAARETVFFNTIPIIAAMKIAGEHASESGFKLKVPKVQARNKQNEPDSTELVLLDRLQKENLPELFMVDKA
SNVIRYLRPIKLTGECLVCHGVPSDTLNKDGLDLLGMKAEGWKAGEQHGAYEILDDLGAIETAIRHKLLVSFAITFVITL
ASILLLIWMTKAVIIRPLRTIVVRMQQVADGDLSSVSEELRNDEVGELSRSIHGAVDKMRTTLTTVLESSCHVATAVGTV
YATSEEIAIGADEVAIQASTVATAGEEMAATSCDIASNCQMAAEGARAATGEATEGAEIIRSSIDIMSRIADQVRASANT
VASLGNRSDQIGEIVGTIEDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAERTTRATHEISGMIKAIQQETKD
AVQAMNEGVREVEQGTAQATHSGEAIERILNLINDLGMQVNQIATAAEEQTATTGEISSNMTRINDIGRSVAGHAHTSAL
QAGHLNAGAEALLSSLGKFKLNESDRLVLRKAKSAHMIFVGKIRAHLHGAQTVDHNLLPTHLTCAFGKWYQGDGQSSCGQ
FDLFKKIDAPHAKVHELGKQAIIAHNSGDKAKAGQCCDEMVEASMHLIGILDNLAAQCK

Specific function: Mediates Taxis To The Sugars Ribose And Galactose VIa An Interaction With The Periplasmic Ribose- Or Galactose-Binding Proteins. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Trans

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=348, Percent_Identity=28.448275862069, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI1788195, Length=304, Percent_Identity=31.25, Blast_Score=125, Evalue=1e-29,
Organism=Escherichia coli, GI1788194, Length=358, Percent_Identity=28.2122905027933, Blast_Score=123, Evalue=3e-29,
Organism=Escherichia coli, GI2367378, Length=347, Percent_Identity=28.2420749279539, Blast_Score=123, Evalue=5e-29,
Organism=Escherichia coli, GI1789453, Length=334, Percent_Identity=29.0419161676647, Blast_Score=108, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 74903; Mature: 74772

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMLGSGLSTKITICVAVALIVSFVANIAYFSVNTRNEAYEAVKSKARAVLLQAESSRNF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHEEEEEECCCHHH
MASLRSNKAFNEVELKSAFDDKLKSATDKVAAARETVFFNTIPIIAAMKIAGEHASESGF
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
KLKVPKVQARNKQNEPDSTELVLLDRLQKENLPELFMVDKASNVIRYLRPIKLTGECLVC
EEECCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCEECCCEEEE
HGVPSDTLNKDGLDLLGMKAEGWKAGEQHGAYEILDDLGAIETAIRHKLLVSFAITFVIT
ECCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LASILLLIWMTKAVIIRPLRTIVVRMQQVADGDLSSVSEELRNDEVGELSRSIHGAVDKM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
RTTLTTVLESSCHVATAVGTVYATSEEIAIGADEVAIQASTVATAGEEMAATSCDIASNC
HHHHHHHHHCCCHHHHHHHHHEECCCCEEECCHHHEEEHHHHHHCCHHHHHCCCCCCCCC
QMAAEGARAATGEATEGAEIIRSSIDIMSRIADQVRASANTVASLGNRSDQIGEIVGTIE
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
DIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAERTTRATHEISGMIKAIQQETK
HHHCCCCEEEHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAVQAMNEGVREVEQGTAQATHSGEAIERILNLINDLGMQVNQIATAAEEQTATTGEISS
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHH
NMTRINDIGRSVAGHAHTSALQAGHLNAGAEALLSSLGKFKLNESDRLVLRKAKSAHMIF
HHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEE
VGKIRAHLHGAQTVDHNLLPTHLTCAFGKWYQGDGQSSCGQFDLFKKIDAPHAKVHELGK
EEHHHHHHCCCHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHCCC
QAIIAHNSGDKAKAGQCCDEMVEASMHLIGILDNLAAQCK
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SMLGSGLSTKITICVAVALIVSFVANIAYFSVNTRNEAYEAVKSKARAVLLQAESSRNF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHEEEEEECCCHHH
MASLRSNKAFNEVELKSAFDDKLKSATDKVAAARETVFFNTIPIIAAMKIAGEHASESGF
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
KLKVPKVQARNKQNEPDSTELVLLDRLQKENLPELFMVDKASNVIRYLRPIKLTGECLVC
EEECCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCEECCCEEEE
HGVPSDTLNKDGLDLLGMKAEGWKAGEQHGAYEILDDLGAIETAIRHKLLVSFAITFVIT
ECCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LASILLLIWMTKAVIIRPLRTIVVRMQQVADGDLSSVSEELRNDEVGELSRSIHGAVDKM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
RTTLTTVLESSCHVATAVGTVYATSEEIAIGADEVAIQASTVATAGEEMAATSCDIASNC
HHHHHHHHHCCCHHHHHHHHHEECCCCEEECCHHHEEEHHHHHHCCHHHHHCCCCCCCCC
QMAAEGARAATGEATEGAEIIRSSIDIMSRIADQVRASANTVASLGNRSDQIGEIVGTIE
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
DIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAERTTRATHEISGMIKAIQQETK
HHHCCCCEEEHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAVQAMNEGVREVEQGTAQATHSGEAIERILNLINDLGMQVNQIATAAEEQTATTGEISS
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHH
NMTRINDIGRSVAGHAHTSALQAGHLNAGAEALLSSLGKFKLNESDRLVLRKAKSAHMIF
HHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEE
VGKIRAHLHGAQTVDHNLLPTHLTCAFGKWYQGDGQSSCGQFDLFKKIDAPHAKVHELGK
EEHHHHHHCCCHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHCCC
QAIIAHNSGDKAKAGQCCDEMVEASMHLIGILDNLAAQCK
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]