Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is 197104407

Identifier: 197104407

GI number: 197104407

Start: 1033888

End: 1035696

Strand: Direct

Name: 197104407

Synonym: PHZ_c0941

Alternate gene names: NA

Gene position: 1033888-1035696 (Clockwise)

Preceding gene: 197104406

Following gene: 197104408

Centisome position: 25.87

GC content: 71.14

Gene sequence:

>1809_bases
ATGGACCGCCGCGCATTCCTGACCGCCACGGCGGCCCTCGCCCTCGCGCCCGCCGCGGCCCGCGCCCAGTCGCGGACGCC
CGAGGACGCCAAGCTCCGGGCGCTGTTCGACCAGATCTTCGAGGAGATCCTCGACAACTCGCCCGAAAGCGTCACCCGGC
TCGGCCTGCACAAGGGCCCGCGCCTGGCCCAGAAGGCGCGGCTGGACGACCAGTCCATCGCCGGCCTCGACGCCGACAAG
GCGCGCAACGCCCGCAACCTCGCCCGCCTGAAGACCATCGACCGCGGCGCGCTCAGCCCCTCGGAGGTCCCGCACTACGA
CGCGGTGATGTTCACCACGCAGGCCAACGACGAGGCCAACCGGCGCTACGCCTACGGCAACGGCGGGGCGGGCCAGCCTT
ATGTCCTGTCGCAGCTCACCGGCGCCTACCAGGACATTCCGGACTTCCTCGGCACCCAGCACGGCGTCGAGACCAAGGCC
GACGCCGACGCCTACCTCTCGCGCCTCGAGGCCTTCGCGGCGGTGATGGACCAGGAGACCGAGCGCGCCCGCCGCGACGT
GAGCCTGGGAGTCGTCCCGCCCGACTTCGTGCTGGAGCGCGCCCTGGTGCAGATGCGGGGCCTGAAGACCGATCCGACCG
CCTCGCCGCTGGTCACGTCGGTGGCGACCCGCGCGGCCGAGAAGGGGATCGCCGGGGACTACGCCGGCCAGGCCGCGAAG
ATTTACCAAGACAAGGTGGTCCCGGCGCTGGACCGGCAGATCGCGCTCCTCGCCTCGCTGCAGCCCAAGGCGGTGCATGA
GGCGGGCTGCTGGCGCCTGCCCGACGGCGAGGCCTACTACCGCGACGCCCTGAAGAGCTCGACCACCACGACGCTGACGC
CGAAGGAGATCCACGAGCTGGGCCTGGAGCAGGCCAAGGTGCTCTCGGCCCGCGCCGAGGTCATCCTGCGCGGCCAGGGT
CTGACGCAGGGCTCGGTCGGCGAGCGGATCCAGCACCTCTACCGCGATCCGGCGCAGCTCTATCCCAACACCGACGCGGC
GAAGGAGCAGCTGATCGCCGACTTGAACAAGCTGGTCCGCGAGATCGAGCCGCGCCTGCCCCAGGCCTTCGGCGCCCTGC
CCAAGGCCCCGGTCGAGATCCGCCGCGTGCCCAAGTTCATCGAGGCCGGCGCGCCCGGCGGCTACTACAACCGGCCCGCC
CTCGACGGCTCCCGGCCCGGCATCTACTGGATCAACCTGCGCGATTCCGCCGAGAACCCGCGCTGGACCCTCAAGACGCT
CACCTACCACGAGGCGATCCCGGGCCATCACCTGCAGCGCTCGCTGCAGCAAGAGGCCGACCTGCCGATGCTGCGCCGCA
TCGCCGGCTTCTCCCCCTATTCGGAGGGGTGGGCGCTCTATTCCGAGCAGGTGGCGCTGGAGATGGGCCTCTACGAGGAC
GACCCGCTGGGCGAGCTGGGCCAGATCCAGGCCTCGCTGTTCCGCGCCGCGCGTCTGGTGGTCGACACCGGCCTTCACGC
CATGCGCTGGAGCCGCGAGAAGGCCATCGAGACCATGACGTCCATCGACGGCTCGCCGACCTCCGCCGCCACGACCGAGA
TCGAGCGCTACTGCGTCTGGCCCGGCCAGGCCTGCAGCTACATGGTCGGCAAGCTCACCTGGCTGCGCCTGCGCGAGAAG
GCCAAGGCCGCCCTCGGCCCGCGCTTCGACCTGCGCAGCTTCCACGACGCGACTCTGCTCTCCGGGGCCATGCCCCTGAC
CGTGCTGGAAGGCGTGGTCGACCGGCACATCGCCGCCCAAAAAGCCTAG

Upstream 100 bases:

>100_bases
CCCGCCGGTTCCATGACGCCGTCCTGCTGTCGGGCTCCATGCCGCTGACCGCCCTCGAAAACGTCGTCGACCTCTACATC
GCCCGGGAGAAGCAAGCCTG

Downstream 100 bases:

>100_bases
AGGATCCCATGACCCGGATGGACCGCCGCAGCTTCCTGCTGACCACCGCCGGCGCCGCGCTGGCCGCCGCCACGCCGGCC
CTGGCCCAGGGCGTGGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 602; Mature: 602

Protein sequence:

>602_residues
MDRRAFLTATAALALAPAAARAQSRTPEDAKLRALFDQIFEEILDNSPESVTRLGLHKGPRLAQKARLDDQSIAGLDADK
ARNARNLARLKTIDRGALSPSEVPHYDAVMFTTQANDEANRRYAYGNGGAGQPYVLSQLTGAYQDIPDFLGTQHGVETKA
DADAYLSRLEAFAAVMDQETERARRDVSLGVVPPDFVLERALVQMRGLKTDPTASPLVTSVATRAAEKGIAGDYAGQAAK
IYQDKVVPALDRQIALLASLQPKAVHEAGCWRLPDGEAYYRDALKSSTTTTLTPKEIHELGLEQAKVLSARAEVILRGQG
LTQGSVGERIQHLYRDPAQLYPNTDAAKEQLIADLNKLVREIEPRLPQAFGALPKAPVEIRRVPKFIEAGAPGGYYNRPA
LDGSRPGIYWINLRDSAENPRWTLKTLTYHEAIPGHHLQRSLQQEADLPMLRRIAGFSPYSEGWALYSEQVALEMGLYED
DPLGELGQIQASLFRAARLVVDTGLHAMRWSREKAIETMTSIDGSPTSAATTEIERYCVWPGQACSYMVGKLTWLRLREK
AKAALGPRFDLRSFHDATLLSGAMPLTVLEGVVDRHIAAQKA

Sequences:

>Translated_602_residues
MDRRAFLTATAALALAPAAARAQSRTPEDAKLRALFDQIFEEILDNSPESVTRLGLHKGPRLAQKARLDDQSIAGLDADK
ARNARNLARLKTIDRGALSPSEVPHYDAVMFTTQANDEANRRYAYGNGGAGQPYVLSQLTGAYQDIPDFLGTQHGVETKA
DADAYLSRLEAFAAVMDQETERARRDVSLGVVPPDFVLERALVQMRGLKTDPTASPLVTSVATRAAEKGIAGDYAGQAAK
IYQDKVVPALDRQIALLASLQPKAVHEAGCWRLPDGEAYYRDALKSSTTTTLTPKEIHELGLEQAKVLSARAEVILRGQG
LTQGSVGERIQHLYRDPAQLYPNTDAAKEQLIADLNKLVREIEPRLPQAFGALPKAPVEIRRVPKFIEAGAPGGYYNRPA
LDGSRPGIYWINLRDSAENPRWTLKTLTYHEAIPGHHLQRSLQQEADLPMLRRIAGFSPYSEGWALYSEQVALEMGLYED
DPLGELGQIQASLFRAARLVVDTGLHAMRWSREKAIETMTSIDGSPTSAATTEIERYCVWPGQACSYMVGKLTWLRLREK
AKAALGPRFDLRSFHDATLLSGAMPLTVLEGVVDRHIAAQKA
>Mature_602_residues
MDRRAFLTATAALALAPAAARAQSRTPEDAKLRALFDQIFEEILDNSPESVTRLGLHKGPRLAQKARLDDQSIAGLDADK
ARNARNLARLKTIDRGALSPSEVPHYDAVMFTTQANDEANRRYAYGNGGAGQPYVLSQLTGAYQDIPDFLGTQHGVETKA
DADAYLSRLEAFAAVMDQETERARRDVSLGVVPPDFVLERALVQMRGLKTDPTASPLVTSVATRAAEKGIAGDYAGQAAK
IYQDKVVPALDRQIALLASLQPKAVHEAGCWRLPDGEAYYRDALKSSTTTTLTPKEIHELGLEQAKVLSARAEVILRGQG
LTQGSVGERIQHLYRDPAQLYPNTDAAKEQLIADLNKLVREIEPRLPQAFGALPKAPVEIRRVPKFIEAGAPGGYYNRPA
LDGSRPGIYWINLRDSAENPRWTLKTLTYHEAIPGHHLQRSLQQEADLPMLRRIAGFSPYSEGWALYSEQVALEMGLYED
DPLGELGQIQASLFRAARLVVDTGLHAMRWSREKAIETMTSIDGSPTSAATTEIERYCVWPGQACSYMVGKLTWLRLREK
AKAALGPRFDLRSFHDATLLSGAMPLTVLEGVVDRHIAAQKA

Specific function: Unknown

COG id: COG4805

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66123; Mature: 66123

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRRAFLTATAALALAPAAARAQSRTPEDAKLRALFDQIFEEILDNSPESVTRLGLHKGP
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
RLAQKARLDDQSIAGLDADKARNARNLARLKTIDRGALSPSEVPHYDAVMFTTQANDEAN
HHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCC
RRYAYGNGGAGQPYVLSQLTGAYQDIPDFLGTQHGVETKADADAYLSRLEAFAAVMDQET
CEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ERARRDVSLGVVPPDFVLERALVQMRGLKTDPTASPLVTSVATRAAEKGIAGDYAGQAAK
HHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHH
IYQDKVVPALDRQIALLASLQPKAVHEAGCWRLPDGEAYYRDALKSSTTTTLTPKEIHEL
HHHHHCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHH
GLEQAKVLSARAEVILRGQGLTQGSVGERIQHLYRDPAQLYPNTDAAKEQLIADLNKLVR
CHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHH
EIEPRLPQAFGALPKAPVEIRRVPKFIEAGAPGGYYNRPALDGSRPGIYWINLRDSAENP
HHCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
RWTLKTLTYHEAIPGHHLQRSLQQEADLPMLRRIAGFSPYSEGWALYSEQVALEMGLYED
CEEEEEEEHHHCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCC
DPLGELGQIQASLFRAARLVVDTGLHAMRWSREKAIETMTSIDGSPTSAATTEIERYCVW
CCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
PGQACSYMVGKLTWLRLREKAKAALGPRFDLRSFHDATLLSGAMPLTVLEGVVDRHIAAQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
KA
CC
>Mature Secondary Structure
MDRRAFLTATAALALAPAAARAQSRTPEDAKLRALFDQIFEEILDNSPESVTRLGLHKGP
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
RLAQKARLDDQSIAGLDADKARNARNLARLKTIDRGALSPSEVPHYDAVMFTTQANDEAN
HHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCC
RRYAYGNGGAGQPYVLSQLTGAYQDIPDFLGTQHGVETKADADAYLSRLEAFAAVMDQET
CEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ERARRDVSLGVVPPDFVLERALVQMRGLKTDPTASPLVTSVATRAAEKGIAGDYAGQAAK
HHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHH
IYQDKVVPALDRQIALLASLQPKAVHEAGCWRLPDGEAYYRDALKSSTTTTLTPKEIHEL
HHHHHCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHH
GLEQAKVLSARAEVILRGQGLTQGSVGERIQHLYRDPAQLYPNTDAAKEQLIADLNKLVR
CHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHH
EIEPRLPQAFGALPKAPVEIRRVPKFIEAGAPGGYYNRPALDGSRPGIYWINLRDSAENP
HHCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
RWTLKTLTYHEAIPGHHLQRSLQQEADLPMLRRIAGFSPYSEGWALYSEQVALEMGLYED
CEEEEEEEHHHCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCC
DPLGELGQIQASLFRAARLVVDTGLHAMRWSREKAIETMTSIDGSPTSAATTEIERYCVW
CCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
PGQACSYMVGKLTWLRLREKAKAALGPRFDLRSFHDATLLSGAMPLTVLEGVVDRHIAAQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
KA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA