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The map label for this gene is yfbS [H]

Identifier: 197104291

GI number: 197104291

Start: 910443

End: 911753

Strand: Direct

Name: yfbS [H]

Synonym: PHZ_c0825

Alternate gene names: 197104291

Gene position: 910443-911753 (Clockwise)

Preceding gene: 197104289

Following gene: 197104295

Centisome position: 22.78

GC content: 71.24

Gene sequence:

>1311_bases
ATGACCTTCGACCAAATCGCCGCGCTGACCGTGCTTGTCGCCGTCGTGGCGGCCCTGATCTGGGGCAAGCTGCGGTCCGA
CGTGGTGGCGCTGGCGGGCGCGGCCGCCCTGCTGGGCCTGGGCGTGGTGCGCCCGGTGGAGGCCCAGAGCGCCTTCGCGA
GCCCGGCCCTGATCGCGCTCGCCTCGCTGTTCGTCATCGCCTACGCGATGGAGCTGTCGGGCCTGCTGGACGCGGTGATC
CGGCTCGCCATCCGTCTCTGCCGGCGGCTGGGCGCGCTCGGCCTCTGGCTGGTGATCCTGTTCTGCGGCGCCGCCTCCGC
CTTCCTGAACAACACGCCCATCGTGGTGCTGGCCGCGCCGGTGGTGCGCGACGTGGCGATCTCCCAGAACCTGCCGCCCA
AGCGGTTCCTGATCCCGCTCTCGTACGTCACCATCCTGGGCGGCGCCTGCACCCTGATCGGCACGTCCACCAACCTGCTG
GTCAACGACATGGCCCGCAGCGCCGGCCAGCCCACCTTCAACCTGTTCGACATCACCCCCGTGGCCCTGGTGATCGGCGC
GGTCGGCGGCCTCTACCTGCTGCTCTTCGCGCCCCGGCTGCTGCGCGACGGCGAGGGCGGGGCCGACATCCCCTACGACC
AGGCGGTGCGCGACGCGGCCGCCAGCGGCAACGGCACCATCGGCGACGCCAGCCTGTTCGCCGAGAGCCGCAGCCTGGAC
CTGCCGCGGGGGCTCGCCGCCTTGGGGGTGTTCGTCGCAGTCATCGTGGTGGCGGCCATGGGCTATGCGCCGATCGCCGC
CTCGGCCTTCACCGGCGCGGTCCTCCTGGTGCTCACCCGGGTCATCAGTGCGGACGAGGCCTACCGGGGGCTTCGGCCGC
AGATCCTTCTGCTGATCGCCGGCATGGTCGTCGTGGGCCTGTCGCTGGAGGTCACCGGCCTGGCGGCCACGGCGACCTCG
GCGCTGACCGCGGTGGTCGGAGGGCTGGGGCCGCTCGCGACGCTGGCGGTGCTCTACGGCCTGACCCTGTTCCTGACCGA
GATCCTGTCGAACGCCGCCGTCGCGGTGCTGCTCACGCCGGTCGCGGTGGCCTTGGCCGAGACCCTCGGCGTCAGCCCGC
AGCCGTTCATCGTCGCCGTGATGATGGCGGCGAGCGCCGCGTTCGCGACCCCCTTCGGCTACCAGACCAACGTGCTGGTC
TTCGAAATGGGCCGCTACAACTACATGGATTTCGTTCGGATCGGCCTGCCGCTGAACTTCGTGACCTGGGCGGCGGGCGT
CGCCGCCATCCCGGTTTTCTTCCCGTTCTAG

Upstream 100 bases:

>100_bases
GGGCGAGGAGGGCGGCGCAACCCAGGCGCCGCGAAGTCCCGTCTGCTCGGCTCATACGGCGACGATAGCAGCCCGGGCGC
GGCTGGCCTACTTTGCGCCG

Downstream 100 bases:

>100_bases
GCGCGGCTCGCCCGGCGAAGGCGGGGCGCAAACGAAGGCGCCGGCCCCCTCGCAGGGACCGGCGCCAAGAAACGTCAGCC
TCAGGCGGCCTCAGGCCTCT

Product: di- and tricarboxylate transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MTFDQIAALTVLVAVVAALIWGKLRSDVVALAGAAALLGLGVVRPVEAQSAFASPALIALASLFVIAYAMELSGLLDAVI
RLAIRLCRRLGALGLWLVILFCGAASAFLNNTPIVVLAAPVVRDVAISQNLPPKRFLIPLSYVTILGGACTLIGTSTNLL
VNDMARSAGQPTFNLFDITPVALVIGAVGGLYLLLFAPRLLRDGEGGADIPYDQAVRDAAASGNGTIGDASLFAESRSLD
LPRGLAALGVFVAVIVVAAMGYAPIAASAFTGAVLLVLTRVISADEAYRGLRPQILLLIAGMVVVGLSLEVTGLAATATS
ALTAVVGGLGPLATLAVLYGLTLFLTEILSNAAVAVLLTPVAVALAETLGVSPQPFIVAVMMAASAAFATPFGYQTNVLV
FEMGRYNYMDFVRIGLPLNFVTWAAGVAAIPVFFPF

Sequences:

>Translated_436_residues
MTFDQIAALTVLVAVVAALIWGKLRSDVVALAGAAALLGLGVVRPVEAQSAFASPALIALASLFVIAYAMELSGLLDAVI
RLAIRLCRRLGALGLWLVILFCGAASAFLNNTPIVVLAAPVVRDVAISQNLPPKRFLIPLSYVTILGGACTLIGTSTNLL
VNDMARSAGQPTFNLFDITPVALVIGAVGGLYLLLFAPRLLRDGEGGADIPYDQAVRDAAASGNGTIGDASLFAESRSLD
LPRGLAALGVFVAVIVVAAMGYAPIAASAFTGAVLLVLTRVISADEAYRGLRPQILLLIAGMVVVGLSLEVTGLAATATS
ALTAVVGGLGPLATLAVLYGLTLFLTEILSNAAVAVLLTPVAVALAETLGVSPQPFIVAVMMAASAAFATPFGYQTNVLV
FEMGRYNYMDFVRIGLPLNFVTWAAGVAAIPVFFPF
>Mature_435_residues
TFDQIAALTVLVAVVAALIWGKLRSDVVALAGAAALLGLGVVRPVEAQSAFASPALIALASLFVIAYAMELSGLLDAVIR
LAIRLCRRLGALGLWLVILFCGAASAFLNNTPIVVLAAPVVRDVAISQNLPPKRFLIPLSYVTILGGACTLIGTSTNLLV
NDMARSAGQPTFNLFDITPVALVIGAVGGLYLLLFAPRLLRDGEGGADIPYDQAVRDAAASGNGTIGDASLFAESRSLDL
PRGLAALGVFVAVIVVAAMGYAPIAASAFTGAVLLVLTRVISADEAYRGLRPQILLLIAGMVVVGLSLEVTGLAATATSA
LTAVVGGLGPLATLAVLYGLTLFLTEILSNAAVAVLLTPVAVALAETLGVSPQPFIVAVMMAASAAFATPFGYQTNVLVF
EMGRYNYMDFVRIGLPLNFVTWAAGVAAIPVFFPF

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=189, Percent_Identity=39.1534391534392, Blast_Score=109, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004680
- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF03600 CitMHS; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 44869; Mature: 44738

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFDQIAALTVLVAVVAALIWGKLRSDVVALAGAAALLGLGVVRPVEAQSAFASPALIAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHH
ASLFVIAYAMELSGLLDAVIRLAIRLCRRLGALGLWLVILFCGAASAFLNNTPIVVLAAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHH
VVRDVAISQNLPPKRFLIPLSYVTILGGACTLIGTSTNLLVNDMARSAGQPTFNLFDITP
HHHHHHHCCCCCCCCEEHHHHHHHHHCCHHEEEECCHHHHHHHHHHHCCCCCEEEEHHHH
VALVIGAVGGLYLLLFAPRLLRDGEGGADIPYDQAVRDAAASGNGTIGDASLFAESRSLD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCC
LPRGLAALGVFVAVIVVAAMGYAPIAASAFTGAVLLVLTRVISADEAYRGLRPQILLLIA
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
GMVVVGLSLEVTGLAATATSALTAVVGGLGPLATLAVLYGLTLFLTEILSNAAVAVLLTP
HHHHHCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
VAVALAETLGVSPQPFIVAVMMAASAAFATPFGYQTNVLVFEMGRYNYMDFVRIGLPLNF
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHCCCHHH
VTWAAGVAAIPVFFPF
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TFDQIAALTVLVAVVAALIWGKLRSDVVALAGAAALLGLGVVRPVEAQSAFASPALIAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHH
ASLFVIAYAMELSGLLDAVIRLAIRLCRRLGALGLWLVILFCGAASAFLNNTPIVVLAAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHH
VVRDVAISQNLPPKRFLIPLSYVTILGGACTLIGTSTNLLVNDMARSAGQPTFNLFDITP
HHHHHHHCCCCCCCCEEHHHHHHHHHCCHHEEEECCHHHHHHHHHHHCCCCCEEEEHHHH
VALVIGAVGGLYLLLFAPRLLRDGEGGADIPYDQAVRDAAASGNGTIGDASLFAESRSLD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCC
LPRGLAALGVFVAVIVVAAMGYAPIAASAFTGAVLLVLTRVISADEAYRGLRPQILLLIA
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
GMVVVGLSLEVTGLAATATSALTAVVGGLGPLATLAVLYGLTLFLTEILSNAAVAVLLTP
HHHHHCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
VAVALAETLGVSPQPFIVAVMMAASAAFATPFGYQTNVLVFEMGRYNYMDFVRIGLPLNF
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHCCCHHH
VTWAAGVAAIPVFFPF
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]