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The map label for this gene is cirA [C]

Identifier: 197104289

GI number: 197104289

Start: 907517

End: 909601

Strand: Direct

Name: cirA [C]

Synonym: PHZ_c0823

Alternate gene names: 197104289

Gene position: 907517-909601 (Clockwise)

Preceding gene: 197104287

Following gene: 197104291

Centisome position: 22.71

GC content: 73.81

Gene sequence:

>2085_bases
GTGACGCCTCGTCGCAAGTGCCCAGGACCCGATATGTCGCGCGCCCTTCTTTTCGCCGCCACCGCCGCCGCCGCCCTCGC
CGCTGGCGCCGCCGCCGCCCAGGATCGCGGCGGGGAGCGGGAGGTGCGGGAGGTCGTGGTGACCGCCGCGCCCTACGCCG
TGACCCTCGACTCGGCCACCACCAGCGTCGACATCCTCAAGCGCGACGAGCTCGACCAGGCGCCGTCGGGCGGCCTCGGC
GACGTCTTGGCCGGGGTGGCCGGCGTGCGCTCCAGCGCCTTCGGCCCGGGCGCCAGCCGCCCGGTGATCCGCGGCCTGTC
GGGTCCCCGCGTGCTGGTCCTCTCCAACGGCCTCGGCCAGGTCGACGCCAGCGCGCTCTCCCCCGACCACGCCGTGGCCA
CCGACCCCCAGGAGGCCGAGCGGATCGAGGTGCTGCGCGGCCCGTCCGCGCTCGCCTACGGCGGCTCGGCCATCGGCGGC
GTGGTCAACATCATCGACGACCGGATCGCCGACGCCCCCGTCCCCGGCGTCGAGGGCCGACTGCTGGCCTCCGGCTCGAC
GGTGGACGAGGGCTGGACCGCCTCGGGCGCCCTGCGCGCGGGGGTCGGAAACTGGATCCTCAGCCTCGACGGCGTGCGCC
GCCAGACGGACGACTACGATGTCCCCACCTCGCCGGAATCCCGCCGCCAGGTGGAGGCCGAGGGCGAGGCGTGGGGCGGT
CCCGTCGGCTCCACGGTGGAGAACACCTTCACCGAACTCTCCGCCTACGGCGCCGGCCTCTCCTACGTGGGCGAGCGCGG
CTATCTCGGCGTCTCGGTGAAGCGGACCGAGACGACCTACGGCGTCCCCGGCCACGCCCACGAACACGAACATGAGGGCG
AGGAGCCCGAGGACGACGGCGACGAACACGGCCACGAGGAGGGCGCCGTCGCGATCGACCTGGAGCAGACCCGCTACGAC
CTGCGCGGCGAGTACGCCCTGGACCTCGGCCCGTTCGAGAAGGTCCGCTTCGCCGGCGGCTACGCCGACTACACCCACCA
GGAGCTGGAGGGCGAGGCGGTCGGCACGACCTTCTCCTCCGAGGGCTGGGAAGGCCGGCTCGAGCTGATCCAGCCCGACC
GGGGCGGCTGGCAGGGCGCGGTCGGCGTCCAGGCGCTGCGGCGCGACTTCGAAGCCGAGGGCGAGGAGGCCTTCGTGCCG
CCCACCCGCACGACCGAGCTCGGCGTCTTCACCCTGCAGCGCTACGACCGCGACCGCTGGGGCGTGGAGGGCGGACTGCG
GCTGGAGACCCGCGAGCTCGACAGCACGGTCGGCAAGCGCGACTTCACCGCCGTCTCGGCCTCGCTGGGCGGGTTCGTGC
GTCCGGCGGACGGCTGGTTCTTCGCCCTCAGCGGCTCGCGCACCGAGCGCGCGCCCTCGCAGGAGGAGCTGTTCGCCGAC
GGCCCCCACCCGGCGACCCGCGCCTACGAACGCGGCGATGTCGGCCTCGACTCCGAGGTCTCCTACACCCTCGACTTCAC
CGGCCACTACGGCCGCGGCCGCTGGGACGTGGACGCCCACCTGTTCGCGGCGAGGTACGACGGCTTCATCGACCTGCTGC
CGACCGGCGAGACCGACGAGGACTCCGAGCTGCCGGTCCACCAGTTCGTGCAGACCGACGCCACCTTCTACGGCGCCGAG
ATCGAGGGCTCGTACCGGCTGTGGGAGGAGGGCGCCCGCAGCTTCCGGCTCGAGGCCGCCGCCGACTACGTCCGCGGCAA
GACCGACCTCGGCCCGCCGGCGCGCATCCCGCCGTGGTCGGTGGCCGGGCGCGGCGTCTTTGAGGGCGGCTGGTGGACGG
GCCGGATCGAGGTCCGCCGCGTGGGCGATCAGGACCGGGTGGCGGCGCTTGAGCTGCCCACCGACGGCTACACCATGCTC
AACGCCGGGCTGACCTTCCGTCCGCTGAAGGATCCCGGCTTCAAGGTCTTCGTCGAGGGCCGCAACCTGACCGACGTGGA
GGCGCGCGAGCACGCCTCGTTCCTGAAGGACATCGCGCCCCTGCCGGGCCGCAACCTCCGCGTCGGCGTGGGCTACCGGT
TCTAG

Upstream 100 bases:

>100_bases
TCGTCGTGATGATGGCAGTGCTGCGACATCGCCCTTCCAGCTAACCCGGTTCCGTCCGCGGCGCCAATGGCTTGACGGCT
CGTTATGTTATTTCATAACA

Downstream 100 bases:

>100_bases
GTCGTCAGCTGCGCCACTCGGCCAGCATCTGGCCGGTGGCGTCCTCGAACGCGACGCGGCCCAGCTCCACCCGCACGAGG
CAGACGGGCCGCACGTCTGG

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 694; Mature: 693

Protein sequence:

>694_residues
MTPRRKCPGPDMSRALLFAATAAAALAAGAAAAQDRGGEREVREVVVTAAPYAVTLDSATTSVDILKRDELDQAPSGGLG
DVLAGVAGVRSSAFGPGASRPVIRGLSGPRVLVLSNGLGQVDASALSPDHAVATDPQEAERIEVLRGPSALAYGGSAIGG
VVNIIDDRIADAPVPGVEGRLLASGSTVDEGWTASGALRAGVGNWILSLDGVRRQTDDYDVPTSPESRRQVEAEGEAWGG
PVGSTVENTFTELSAYGAGLSYVGERGYLGVSVKRTETTYGVPGHAHEHEHEGEEPEDDGDEHGHEEGAVAIDLEQTRYD
LRGEYALDLGPFEKVRFAGGYADYTHQELEGEAVGTTFSSEGWEGRLELIQPDRGGWQGAVGVQALRRDFEAEGEEAFVP
PTRTTELGVFTLQRYDRDRWGVEGGLRLETRELDSTVGKRDFTAVSASLGGFVRPADGWFFALSGSRTERAPSQEELFAD
GPHPATRAYERGDVGLDSEVSYTLDFTGHYGRGRWDVDAHLFAARYDGFIDLLPTGETDEDSELPVHQFVQTDATFYGAE
IEGSYRLWEEGARSFRLEAAADYVRGKTDLGPPARIPPWSVAGRGVFEGGWWTGRIEVRRVGDQDRVAALELPTDGYTML
NAGLTFRPLKDPGFKVFVEGRNLTDVEAREHASFLKDIAPLPGRNLRVGVGYRF

Sequences:

>Translated_694_residues
MTPRRKCPGPDMSRALLFAATAAAALAAGAAAAQDRGGEREVREVVVTAAPYAVTLDSATTSVDILKRDELDQAPSGGLG
DVLAGVAGVRSSAFGPGASRPVIRGLSGPRVLVLSNGLGQVDASALSPDHAVATDPQEAERIEVLRGPSALAYGGSAIGG
VVNIIDDRIADAPVPGVEGRLLASGSTVDEGWTASGALRAGVGNWILSLDGVRRQTDDYDVPTSPESRRQVEAEGEAWGG
PVGSTVENTFTELSAYGAGLSYVGERGYLGVSVKRTETTYGVPGHAHEHEHEGEEPEDDGDEHGHEEGAVAIDLEQTRYD
LRGEYALDLGPFEKVRFAGGYADYTHQELEGEAVGTTFSSEGWEGRLELIQPDRGGWQGAVGVQALRRDFEAEGEEAFVP
PTRTTELGVFTLQRYDRDRWGVEGGLRLETRELDSTVGKRDFTAVSASLGGFVRPADGWFFALSGSRTERAPSQEELFAD
GPHPATRAYERGDVGLDSEVSYTLDFTGHYGRGRWDVDAHLFAARYDGFIDLLPTGETDEDSELPVHQFVQTDATFYGAE
IEGSYRLWEEGARSFRLEAAADYVRGKTDLGPPARIPPWSVAGRGVFEGGWWTGRIEVRRVGDQDRVAALELPTDGYTML
NAGLTFRPLKDPGFKVFVEGRNLTDVEAREHASFLKDIAPLPGRNLRVGVGYRF
>Mature_693_residues
TPRRKCPGPDMSRALLFAATAAAALAAGAAAAQDRGGEREVREVVVTAAPYAVTLDSATTSVDILKRDELDQAPSGGLGD
VLAGVAGVRSSAFGPGASRPVIRGLSGPRVLVLSNGLGQVDASALSPDHAVATDPQEAERIEVLRGPSALAYGGSAIGGV
VNIIDDRIADAPVPGVEGRLLASGSTVDEGWTASGALRAGVGNWILSLDGVRRQTDDYDVPTSPESRRQVEAEGEAWGGP
VGSTVENTFTELSAYGAGLSYVGERGYLGVSVKRTETTYGVPGHAHEHEHEGEEPEDDGDEHGHEEGAVAIDLEQTRYDL
RGEYALDLGPFEKVRFAGGYADYTHQELEGEAVGTTFSSEGWEGRLELIQPDRGGWQGAVGVQALRRDFEAEGEEAFVPP
TRTTELGVFTLQRYDRDRWGVEGGLRLETRELDSTVGKRDFTAVSASLGGFVRPADGWFFALSGSRTERAPSQEELFADG
PHPATRAYERGDVGLDSEVSYTLDFTGHYGRGRWDVDAHLFAARYDGFIDLLPTGETDEDSELPVHQFVQTDATFYGAEI
EGSYRLWEEGARSFRLEAAADYVRGKTDLGPPARIPPWSVAGRGVFEGGWWTGRIEVRRVGDQDRVAALELPTDGYTMLN
AGLTFRPLKDPGFKVFVEGRNLTDVEAREHASFLKDIAPLPGRNLRVGVGYRF

Specific function: Probable receptor, tonB-dependent [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1788478, Length=150, Percent_Identity=34.6666666666667, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 74575; Mature: 74444

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPRRKCPGPDMSRALLFAATAAAALAAGAAAAQDRGGEREVREVVVTAAPYAVTLDSAT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEECCEEEEECCCC
TSVDILKRDELDQAPSGGLGDVLAGVAGVRSSAFGPGASRPVIRGLSGPRVLVLSNGLGQ
CEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCEEEEEECCCCC
VDASALSPDHAVATDPQEAERIEVLRGPSALAYGGSAIGGVVNIIDDRIADAPVPGVEGR
CCHHHCCCCCCCCCCCHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHCCCCCCCCCCE
LLASGSTVDEGWTASGALRAGVGNWILSLDGVRRQTDDYDVPTSPESRRQVEAEGEAWGG
EEECCCCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHEECCCCCCCCC
PVGSTVENTFTELSAYGAGLSYVGERGYLGVSVKRTETTYGVPGHAHEHEHEGEEPEDDG
CCCCHHHHHHHHHHHHCCCHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
DEHGHEEGAVAIDLEQTRYDLRGEYALDLGPFEKVRFAGGYADYTHQELEGEAVGTTFSS
CCCCCCCCCEEEEEHHHHHCCCCCEEEECCCHHHEEECCCCCCCCHHHCCCCEECCEECC
EGWEGRLELIQPDRGGWQGAVGVQALRRDFEAEGEEAFVPPTRTTELGVFTLQRYDRDRW
CCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCEEEEEEEEHHCCHHC
GVEGGLRLETRELDSTVGKRDFTAVSASLGGFVRPADGWFFALSGSRTERAPSQEELFAD
CCCCCCEEEHHHHHHHCCCCHHHHHHHHHCCCEECCCCEEEEEECCCCCCCCCHHHHCCC
GPHPATRAYERGDVGLDSEVSYTLDFTGHYGRGRWDVDAHLFAARYDGFIDLLPTGETDE
CCCHHHHCCCCCCCCCCCCEEEEEEECCCCCCCEECCCCEEEEEECCCEEEEECCCCCCC
DSELPVHQFVQTDATFYGAEIEGSYRLWEEGARSFRLEAAADYVRGKTDLGPPARIPPWS
CCCCCHHHHHHCCCEEEEEEECCCHHHHHHHHHHEEHHHHHHHHCCCCCCCCCCCCCCCC
VAGRGVFEGGWWTGRIEVRRVGDQDRVAALELPTDGYTMLNAGLTFRPLKDPGFKVFVEG
CCCCCEECCCEEEEEEEEEECCCCCCEEEEEECCCCCEEEECCEEEEECCCCCCEEEECC
RNLTDVEAREHASFLKDIAPLPGRNLRVGVGYRF
CCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCC
>Mature Secondary Structure 
TPRRKCPGPDMSRALLFAATAAAALAAGAAAAQDRGGEREVREVVVTAAPYAVTLDSAT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEECCEEEEECCCC
TSVDILKRDELDQAPSGGLGDVLAGVAGVRSSAFGPGASRPVIRGLSGPRVLVLSNGLGQ
CEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCEEEEEECCCCC
VDASALSPDHAVATDPQEAERIEVLRGPSALAYGGSAIGGVVNIIDDRIADAPVPGVEGR
CCHHHCCCCCCCCCCCHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHCCCCCCCCCCE
LLASGSTVDEGWTASGALRAGVGNWILSLDGVRRQTDDYDVPTSPESRRQVEAEGEAWGG
EEECCCCCCCCCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHEECCCCCCCCC
PVGSTVENTFTELSAYGAGLSYVGERGYLGVSVKRTETTYGVPGHAHEHEHEGEEPEDDG
CCCCHHHHHHHHHHHHCCCHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
DEHGHEEGAVAIDLEQTRYDLRGEYALDLGPFEKVRFAGGYADYTHQELEGEAVGTTFSS
CCCCCCCCCEEEEEHHHHHCCCCCEEEECCCHHHEEECCCCCCCCHHHCCCCEECCEECC
EGWEGRLELIQPDRGGWQGAVGVQALRRDFEAEGEEAFVPPTRTTELGVFTLQRYDRDRW
CCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCEEEEEEEEHHCCHHC
GVEGGLRLETRELDSTVGKRDFTAVSASLGGFVRPADGWFFALSGSRTERAPSQEELFAD
CCCCCCEEEHHHHHHHCCCCHHHHHHHHHCCCEECCCCEEEEEECCCCCCCCCHHHHCCC
GPHPATRAYERGDVGLDSEVSYTLDFTGHYGRGRWDVDAHLFAARYDGFIDLLPTGETDE
CCCHHHHCCCCCCCCCCCCEEEEEEECCCCCCCEECCCCEEEEEECCCEEEEECCCCCCC
DSELPVHQFVQTDATFYGAEIEGSYRLWEEGARSFRLEAAADYVRGKTDLGPPARIPPWS
CCCCCHHHHHHCCCEEEEEEECCCHHHHHHHHHHEEHHHHHHHHCCCCCCCCCCCCCCCC
VAGRGVFEGGWWTGRIEVRRVGDQDRVAALELPTDGYTMLNAGLTFRPLKDPGFKVFVEG
CCCCCEECCCEEEEEEEEEECCCCCCEEEEEECCCCCEEEECCEEEEECCCCCCEEEECC
RNLTDVEAREHASFLKDIAPLPGRNLRVGVGYRF
CCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]