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The map label for this gene is yfkH [H]

Identifier: 197104295

GI number: 197104295

Start: 915085

End: 916032

Strand: Direct

Name: yfkH [H]

Synonym: PHZ_c0829

Alternate gene names: 197104295

Gene position: 915085-916032 (Clockwise)

Preceding gene: 197104291

Following gene: 197104296

Centisome position: 22.9

GC content: 70.15

Gene sequence:

>948_bases
ATGATCTTCGTGGCCGGCAGCATCACCTTCTTCACCCTGCTGGCGATCTTCCCCGCCCTGGGGGCCTTCGTCTCGATCTA
CGGCCTGATCGCCGACGTCGCGGCCGTGAACGACCAGCTGGCCCAGCTCTCCCTAGTGTTCCCCGCCGAGGTGGTCCGCA
TCGTCGGCGAGCAGATGATGCGGCTGGCGACCGAGCGGAGCGCGAACCTCTCGGTCGCCTTCCTGGTCAGCCTGCTGCTG
TCGATCTGGACCGCCAACGCCGGCATGAAGGCGCTCTTCGACGGCCTCAACATCGCCTACGGCGAAACCGAGACCCGCAA
CTTCTTCTACCGGACGGCGCTGACCTACGCCTTCACCCTGGCCTTCCTGCTGTTCATCACGCTGGTCAGCGCCATCCTGG
TGGCGGCGCCCATCGCCCTGAAGACGTTCGGCCTGCGCTCGGGCTGGATGTTCGGGGTCCGCTGGCTGGCGCTGTTCTTC
GTGGCCGCCGCCGCCTTCTCGGTCGCGTACCGCTTCGGCCCCTGCCGCCGGCGGGCGCGCTGGCGCTGGGTGACCTGGGG
CGCGGTGGTCGCCGCGGTTCTGTGGATGGCCGGGTCGGCGGGCTTCTCCTGGTACGTCAACAACATCGCCCACCTGCAGG
TGACCTACGGCTCGCTGGGCGCGGCGATCGGCTTCATGCTGTGGGTCTGGTTCTCGGTGCTGGTGGTGCTGACGGGCGCC
GAGCTGAACGCCGAGATCGAGCACCAGACCGCGGTCGATTCCACCGTCGGGCCGCCCAAGCCCATGGGCGAGCGGGGCGC
GGTGATGGCCGATTCCGTCGGCCTGCGGTTCATCGGGGTGCGCAAGGGCGCGCGCCTGCTCTGGGCCGACGTGCGCCGCC
AGGGCGCCAACCTCCTGCGGCGCGACCGCGCCCCGCCGCCTCTGGCGAAGCGCGGCGACGGCCCCTAA

Upstream 100 bases:

>100_bases
GCCCGGCCGGGGCCGGCTGGCGCACGCGCCGCACGCCATCCCCTGGCGTGGCTGGAAGGACATCCTCTGGCGCACCTGGC
GCAGCATCAACGCCGACCGG

Downstream 100 bases:

>100_bases
GGTGCGCCGCCGGGCGGACGCGGTAGGGATCGAGATGCTGAAGAAGTTGCTGTCGCGCGGCGCGGCTCCCGCGCCGGCTC
CCGCCGCGGTTTCCCCCGGT

Product: ribonuclease RNase BN (RBN) transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MIFVAGSITFFTLLAIFPALGAFVSIYGLIADVAAVNDQLAQLSLVFPAEVVRIVGEQMMRLATERSANLSVAFLVSLLL
SIWTANAGMKALFDGLNIAYGETETRNFFYRTALTYAFTLAFLLFITLVSAILVAAPIALKTFGLRSGWMFGVRWLALFF
VAAAAFSVAYRFGPCRRRARWRWVTWGAVVAAVLWMAGSAGFSWYVNNIAHLQVTYGSLGAAIGFMLWVWFSVLVVLTGA
ELNAEIEHQTAVDSTVGPPKPMGERGAVMADSVGLRFIGVRKGARLLWADVRRQGANLLRRDRAPPPLAKRGDGP

Sequences:

>Translated_315_residues
MIFVAGSITFFTLLAIFPALGAFVSIYGLIADVAAVNDQLAQLSLVFPAEVVRIVGEQMMRLATERSANLSVAFLVSLLL
SIWTANAGMKALFDGLNIAYGETETRNFFYRTALTYAFTLAFLLFITLVSAILVAAPIALKTFGLRSGWMFGVRWLALFF
VAAAAFSVAYRFGPCRRRARWRWVTWGAVVAAVLWMAGSAGFSWYVNNIAHLQVTYGSLGAAIGFMLWVWFSVLVVLTGA
ELNAEIEHQTAVDSTVGPPKPMGERGAVMADSVGLRFIGVRKGARLLWADVRRQGANLLRRDRAPPPLAKRGDGP
>Mature_315_residues
MIFVAGSITFFTLLAIFPALGAFVSIYGLIADVAAVNDQLAQLSLVFPAEVVRIVGEQMMRLATERSANLSVAFLVSLLL
SIWTANAGMKALFDGLNIAYGETETRNFFYRTALTYAFTLAFLLFITLVSAILVAAPIALKTFGLRSGWMFGVRWLALFF
VAAAAFSVAYRFGPCRRRARWRWVTWGAVVAAVLWMAGSAGFSWYVNNIAHLQVTYGSLGAAIGFMLWVWFSVLVVLTGA
ELNAEIEHQTAVDSTVGPPKPMGERGAVMADSVGLRFIGVRKGARLLWADVRRQGANLLRRDRAPPPLAKRGDGP

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 34366; Mature: 34366

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFVAGSITFFTLLAIFPALGAFVSIYGLIADVAAVNDQLAQLSLVFPAEVVRIVGEQMM
CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLATERSANLSVAFLVSLLLSIWTANAGMKALFDGLNIAYGETETRNFFYRTALTYAFTL
HHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHH
AFLLFITLVSAILVAAPIALKTFGLRSGWMFGVRWLALFFVAAAAFSVAYRFGPCRRRAR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC
WRWVTWGAVVAAVLWMAGSAGFSWYVNNIAHLQVTYGSLGAAIGFMLWVWFSVLVVLTGA
EEEEEHHHHHHHHHHHHCCCCHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCC
ELNAEIEHQTAVDSTVGPPKPMGERGAVMADSVGLRFIGVRKGARLLWADVRRQGANLLR
CCCCCHHHHHHHCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHH
RDRAPPPLAKRGDGP
HCCCCCCCCCCCCCC
>Mature Secondary Structure
MIFVAGSITFFTLLAIFPALGAFVSIYGLIADVAAVNDQLAQLSLVFPAEVVRIVGEQMM
CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLATERSANLSVAFLVSLLLSIWTANAGMKALFDGLNIAYGETETRNFFYRTALTYAFTL
HHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHH
AFLLFITLVSAILVAAPIALKTFGLRSGWMFGVRWLALFFVAAAAFSVAYRFGPCRRRAR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC
WRWVTWGAVVAAVLWMAGSAGFSWYVNNIAHLQVTYGSLGAAIGFMLWVWFSVLVVLTGA
EEEEEHHHHHHHHHHHHCCCCHHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCC
ELNAEIEHQTAVDSTVGPPKPMGERGAVMADSVGLRFIGVRKGARLLWADVRRQGANLLR
CCCCCHHHHHHHCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHH
RDRAPPPLAKRGDGP
HCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]