| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is blh [H]
Identifier: 197104200
GI number: 197104200
Start: 806631
End: 807491
Strand: Direct
Name: blh [H]
Synonym: PHZ_c0734
Alternate gene names: 197104200
Gene position: 806631-807491 (Clockwise)
Preceding gene: 197104198
Following gene: 197104201
Centisome position: 20.18
GC content: 71.78
Gene sequence:
>861_bases ATGCGACCCCACGTCCAGACGTTCTTCGACCGCGCCACCTCGACCGCCACGCACCTCGTCTCGGACCCGGCGACCGGCGT CGCCGCCGTCGTCGATCCGGTGCTGGATTTCGACCCCAAGTCGGCGAAGCTCTCGACCCGCTCGGCCGACGAGGTGCTGG CCGCCGTCCGCGACCAGGGCCTGAAGCTCGCCTTCGTTCTGGAGACCCACGCCCACGCCGACCACCTCTCGGCGGGCGAC TACATCCGCAAGGCGACGGGCGCCGAGCTCGTCATCGGCGCCAACATCCGCGAGGTTCAGAAGACCTTCATCCCGATGTT CGAGGCCGACGACGTCAGCCCCGACGGCCGGGTCTTCGACGTGCTGCTGGGCGAGGGCGACGTCCTGCGGATGGGCGAGA TCGAGATCGGCGTGCTGCACACGCCCGGCCACACGCCCGCCTGCGTCACCTACCTGATCGGCGACGCCGCCTTCGTGGGC GACACCCTGTTCATGCCGGACTACGGCACGGCGCGGGCGGACTTCCCGGGCGGCGACGCCGCGACGCTCTTCCGCTCGAT CCGCAAGATCCTGGCGCTGCCGCCGCAGACCCGGATCTTCGTCGGCCACGACTACCTGCCCGAAGGCCGCGAGACCTTCC GCTGGGAGACGACCGTGGCCGAGCAGCGGGCGGGCAACGTCCACGTCCACGACGGCGTCTCGGAGGCCGAGTTCGTGGCC ATGCGGACGGCGCGCGACGCCACGCTGGCGGCGCCGACGCTGATCCTGCCCTCGCTGCAGGTGAACATCCGCGCCGGCGC CCTGCCGCCGCCCACGCCGAGGGGTCACGTGTTCCTGCGGCTGCCGGTCACCACCCCCTGA
Upstream 100 bases:
>100_bases CGGCGGATCAGGGCGCCGCCGGACGATCCGTCCATCCTGGGCTGCGCTTGTTATATTAGGAGGATCTAATATATTGGATC TCGAAAGGGAGCCCACGAAC
Downstream 100 bases:
>100_bases CATGGAGCCCTCGGCCTACTTCGCCGCGGTCGCCAGCGGAGCCCTCGTCGGCCTGCTGCTGACGGTGTTCGGCGGCGGCG GATCGGTCCTGGCCACGCCG
Product: beta-lactamase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MRPHVQTFFDRATSTATHLVSDPATGVAAVVDPVLDFDPKSAKLSTRSADEVLAAVRDQGLKLAFVLETHAHADHLSAGD YIRKATGAELVIGANIREVQKTFIPMFEADDVSPDGRVFDVLLGEGDVLRMGEIEIGVLHTPGHTPACVTYLIGDAAFVG DTLFMPDYGTARADFPGGDAATLFRSIRKILALPPQTRIFVGHDYLPEGRETFRWETTVAEQRAGNVHVHDGVSEAEFVA MRTARDATLAAPTLILPSLQVNIRAGALPPPTPRGHVFLRLPVTTP
Sequences:
>Translated_286_residues MRPHVQTFFDRATSTATHLVSDPATGVAAVVDPVLDFDPKSAKLSTRSADEVLAAVRDQGLKLAFVLETHAHADHLSAGD YIRKATGAELVIGANIREVQKTFIPMFEADDVSPDGRVFDVLLGEGDVLRMGEIEIGVLHTPGHTPACVTYLIGDAAFVG DTLFMPDYGTARADFPGGDAATLFRSIRKILALPPQTRIFVGHDYLPEGRETFRWETTVAEQRAGNVHVHDGVSEAEFVA MRTARDATLAAPTLILPSLQVNIRAGALPPPTPRGHVFLRLPVTTP >Mature_286_residues MRPHVQTFFDRATSTATHLVSDPATGVAAVVDPVLDFDPKSAKLSTRSADEVLAAVRDQGLKLAFVLETHAHADHLSAGD YIRKATGAELVIGANIREVQKTFIPMFEADDVSPDGRVFDVLLGEGDVLRMGEIEIGVLHTPGHTPACVTYLIGDAAFVG DTLFMPDYGTARADFPGGDAATLFRSIRKILALPPQTRIFVGHDYLPEGRETFRWETTVAEQRAGNVHVHDGVSEAEFVA MRTARDATLAAPTLILPSLQVNIRAGALPPPTPRGHVFLRLPVTTP
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=269, Percent_Identity=28.996282527881, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI14150041, Length=163, Percent_Identity=28.2208588957055, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1787158, Length=199, Percent_Identity=31.6582914572864, Blast_Score=75, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17538952, Length=267, Percent_Identity=28.8389513108614, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI221330176, Length=269, Percent_Identity=31.5985130111524, Blast_Score=117, Evalue=8e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 30833; Mature: 30833
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPHVQTFFDRATSTATHLVSDPATGVAAVVDPVLDFDPKSAKLSTRSADEVLAAVRDQG CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHCCC LKLAFVLETHAHADHLSAGDYIRKATGAELVIGANIREVQKTFIPMFEADDVSPDGRVFD CEEEEEEECCCCCCCCCCCHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCEEE VLLGEGDVLRMGEIEIGVLHTPGHTPACVTYLIGDAAFVGDTLFMPDYGTARADFPGGDA EEECCCCEEEECCEEEEEEECCCCCHHHHHHHHHCHHHHCCEEECCCCCCCCCCCCCCHH ATLFRSIRKILALPPQTRIFVGHDYLPEGRETFRWETTVAEQRAGNVHVHDGVSEAEFVA HHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHEEEEHHHHHHCCCCEEEECCCCCHHEEE MRTARDATLAAPTLILPSLQVNIRAGALPPPTPRGHVFLRLPVTTP EHHCCCCHHCCCEEEECCEEEEEEECCCCCCCCCCEEEEEEECCCC >Mature Secondary Structure MRPHVQTFFDRATSTATHLVSDPATGVAAVVDPVLDFDPKSAKLSTRSADEVLAAVRDQG CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHCCC LKLAFVLETHAHADHLSAGDYIRKATGAELVIGANIREVQKTFIPMFEADDVSPDGRVFD CEEEEEEECCCCCCCCCCCHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCEEE VLLGEGDVLRMGEIEIGVLHTPGHTPACVTYLIGDAAFVGDTLFMPDYGTARADFPGGDA EEECCCCEEEECCEEEEEEECCCCCHHHHHHHHHCHHHHCCEEECCCCCCCCCCCCCCHH ATLFRSIRKILALPPQTRIFVGHDYLPEGRETFRWETTVAEQRAGNVHVHDGVSEAEFVA HHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHEEEEHHHHHHCCCCEEEECCCCCHHEEE MRTARDATLAAPTLILPSLQVNIRAGALPPPTPRGHVFLRLPVTTP EHHCCCCHHCCCEEEECCEEEEEEECCCCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]