| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104201
Identifier: 197104201
GI number: 197104201
Start: 807493
End: 808269
Strand: Direct
Name: 197104201
Synonym: PHZ_c0735
Alternate gene names: NA
Gene position: 807493-808269 (Clockwise)
Preceding gene: 197104200
Following gene: 197104203
Centisome position: 20.21
GC content: 75.68
Gene sequence:
>777_bases ATGGAGCCCTCGGCCTACTTCGCCGCGGTCGCCAGCGGAGCCCTCGTCGGCCTGCTGCTGACGGTGTTCGGCGGCGGCGG ATCGGTCCTGGCCACGCCGCTGCTGCTGTACGTCGTCGGCGTGCGCGACGCCCACGTGGCGATCGGCACCTCGGCGGCGG CGGTGGCGGTGAACGCGGCGATGGGCCTCTCGGCGCAGGCCCGGGCGGGCCGGGTGAAGTGGCCCTGCGCGCTGGCGTTC GGCCTGGCGGGCCTCGCCGGCTCCCTGGCCGGGGCCCATTTCGCCAAGCAGGTGGAGGGCGGGACGCTGCTTGTCTGGTT CGCGCTGGCCATGGCGCTGGTGGGCGGCTCCATGCTGCTGCCGAAGAAGAACGAGGGCGATCCGGCGGTGCGGCTCAATC CCCGGCTGGTGGTCCGGCTCGCGCCCGTCGGCCTGCTGACCGGCCTGGCCGCCGGCTTCTTCGGCATCGGCGGCGGCTTC CTGATCGTACCGGGGCTGATGGCCGCGACCGGCATGACCCTGGCCCACGCGGCCGCCTCCTCGCTGGTATCGGTGACGCT GTTCGGGGCGGCGACCAGCGCCAGCTACGCCGTCTCGGGCCTGGTGGACTGGGGCCTCTTCGCCGCCCTGGTGGCGGGCG GCGCGGTCGGAGCCGTGGGCGGCGCGCCGATCGCGCGCAGGCTCGCCCGCCGCGCGGACGTGGCCCGGCGCATCTTCGCC CTGATGGTGATCGCGACCGCCGCCTACGTCGCCTGGCGGGCGCTGACCGGGACCTAG
Upstream 100 bases:
>100_bases ATCCTGCCCTCGCTGCAGGTGAACATCCGCGCCGGCGCCCTGCCGCCGCCCACGCCGAGGGGTCACGTGTTCCTGCGGCT GCCGGTCACCACCCCCTGAC
Downstream 100 bases:
>100_bases ACCATCCCCGCCTTGCGCAGCGCCTGGTAGGCCTTGATCACCCGCTGCAGCTTCTGCTCGCCCGAGCGGTCGCCCTGGTT CGCGTCGGGGTGCAGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MEPSAYFAAVASGALVGLLLTVFGGGGSVLATPLLLYVVGVRDAHVAIGTSAAAVAVNAAMGLSAQARAGRVKWPCALAF GLAGLAGSLAGAHFAKQVEGGTLLVWFALAMALVGGSMLLPKKNEGDPAVRLNPRLVVRLAPVGLLTGLAAGFFGIGGGF LIVPGLMAATGMTLAHAAASSLVSVTLFGAATSASYAVSGLVDWGLFAALVAGGAVGAVGGAPIARRLARRADVARRIFA LMVIATAAYVAWRALTGT
Sequences:
>Translated_258_residues MEPSAYFAAVASGALVGLLLTVFGGGGSVLATPLLLYVVGVRDAHVAIGTSAAAVAVNAAMGLSAQARAGRVKWPCALAF GLAGLAGSLAGAHFAKQVEGGTLLVWFALAMALVGGSMLLPKKNEGDPAVRLNPRLVVRLAPVGLLTGLAAGFFGIGGGF LIVPGLMAATGMTLAHAAASSLVSVTLFGAATSASYAVSGLVDWGLFAALVAGGAVGAVGGAPIARRLARRADVARRIFA LMVIATAAYVAWRALTGT >Mature_258_residues MEPSAYFAAVASGALVGLLLTVFGGGGSVLATPLLLYVVGVRDAHVAIGTSAAAVAVNAAMGLSAQARAGRVKWPCALAF GLAGLAGSLAGAHFAKQVEGGTLLVWFALAMALVGGSMLLPKKNEGDPAVRLNPRLVVRLAPVGLLTGLAAGFFGIGGGF LIVPGLMAATGMTLAHAAASSLVSVTLFGAATSASYAVSGLVDWGLFAALVAGGAVGAVGGAPIARRLARRADVARRIFA LMVIATAAYVAWRALTGT
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0721 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002781 [H]
Pfam domain/function: PF01925 DUF81 [H]
EC number: NA
Molecular weight: Translated: 25466; Mature: 25466
Theoretical pI: Translated: 11.41; Mature: 11.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPSAYFAAVASGALVGLLLTVFGGGGSVLATPLLLYVVGVRDAHVAIGTSAAAVAVNAA CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHH MGLSAQARAGRVKWPCALAFGLAGLAGSLAGAHFAKQVEGGTLLVWFALAMALVGGSMLL HCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEC PKKNEGDPAVRLNPRLVVRLAPVGLLTGLAAGFFGIGGGFLIVPGLMAATGMTLAHAAAS CCCCCCCCEEEECCEEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH SLVSVTLFGAATSASYAVSGLVDWGLFAALVAGGAVGAVGGAPIARRLARRADVARRIFA HHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH LMVIATAAYVAWRALTGT HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEPSAYFAAVASGALVGLLLTVFGGGGSVLATPLLLYVVGVRDAHVAIGTSAAAVAVNAA CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHH MGLSAQARAGRVKWPCALAFGLAGLAGSLAGAHFAKQVEGGTLLVWFALAMALVGGSMLL HCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEC PKKNEGDPAVRLNPRLVVRLAPVGLLTGLAAGFFGIGGGFLIVPGLMAATGMTLAHAAAS CCCCCCCCEEEECCEEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH SLVSVTLFGAATSASYAVSGLVDWGLFAALVAGGAVGAVGGAPIARRLARRADVARRIFA HHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH LMVIATAAYVAWRALTGT HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12533478 [H]