Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

Click here to switch to the map view.

The map label for this gene is 195952992

Identifier: 195952992

GI number: 195952992

Start: 551215

End: 551325

Strand: Direct

Name: 195952992

Synonym: HY04AAS1_0617

Alternate gene names: NA

Gene position: 551215-551325 (Clockwise)

Preceding gene: 195952991

Following gene: 195952993

Centisome position: 35.35

GC content: 49.55

Gene sequence:

>111_bases
ATGAAGAAGGTGAACGCTAAACAACTTTTGGCAGTAGGCGTTATAGGCTTAACCCTTGCTTCCTGTGGCGGTGGAGGCGG
AGGTGGTGGCAGTTCACAAACCCAAACATAA

Upstream 100 bases:

>100_bases
TAAGGATGGCATCCTATGAGTACACCTGTCCCACTGGCACATACAAGTATACTACCTTTGGAACCATAGGTTTTCTAACA
ACAACAGCGGAGGTGGTAAG

Downstream 100 bases:

>100_bases
ATATCAGCCAATCCAATAGCGATGAATATTTATGCCGGTAGCAGGATTTTATCATCTGCTACTGTACCATCCAATATTCC
AGTTATCGTTGTTTATATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 36; Mature: 36

Protein sequence:

>36_residues
MKKVNAKQLLAVGVIGLTLASCGGGGGGGGSSQTQT

Sequences:

>Translated_36_residues
MKKVNAKQLLAVGVIGLTLASCGGGGGGGGSSQTQT
>Mature_36_residues
MKKVNAKQLLAVGVIGLTLASCGGGGGGGGSSQTQT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3347; Mature: 3347

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVNAKQLLAVGVIGLTLASCGGGGGGGGSSQTQT
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKVNAKQLLAVGVIGLTLASCGGGGGGGGSSQTQT
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA