Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
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Accession | NC_011126 |
Length | 1,559,514 |
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The map label for this gene is 195952993
Identifier: 195952993
GI number: 195952993
Start: 551347
End: 552366
Strand: Direct
Name: 195952993
Synonym: HY04AAS1_0618
Alternate gene names: NA
Gene position: 551347-552366 (Clockwise)
Preceding gene: 195952992
Following gene: 195952994
Centisome position: 35.35
GC content: 36.96
Gene sequence:
>1020_bases ATGAATATTTATGCCGGTAGCAGGATTTTATCATCTGCTACTGTACCATCCAATATTCCAGTTATCGTTGTTTATATCAA CGGACAACCAGTAAATCTTTTATTTGATACTGGGGCATCAGGTGTTCTTGTCAATCAGGGAACGTTCCCTATACCTCAGT CAGCTTACACATCACAAACCTTTTACGGACACTTTGGTGATGGCACAGTTTTCTCAGGCACGGTAGCCAACGTGCAAGTT TGTTTAACGTCGGCATCAACAGATTGCATAAATATGCCTGTGGCAGTAAATTCAAACACAAGTGGCACTAATGCTCCATT TCCAACTGGAAATTATATAGTAGGTGACTTTGGAATGGACTGCGGGCAAAATACATTTGCATCTTTTGATAGCACAAATA TAATTGTCAATACTTTCTGCCCATTGTATTATCTATGGCAACAAAACCAATACTTTAACGCTTATTCATTAAGTTTCTAT CCATTATCTAACACTTACTATGCAACACCAGGCTTTACAACACCAATAGGAAGTATAACGCTTGGAAGTTTTAGTGCAAA CAACTTGATTAGCTATACTGGCAATGGAAATGCTCCATATGTGAATGCCAATTACCCTAACAGTCTTACTTACATAACAA TATATGATACTGGAACACCGATTATTAGGATGACGAACGACGTATTATCAGCAGAAATACCATACTTCAATATTTATACT GACGGAAACAATTGTAGCGGATCTAACTGGATACAAGGCGGTTATCCTATATCTTATTCCATACCACTTGCCAATAGCTC GTCATCTCTTACAATATCATTTACAACAGAACCACCAGCTAATATGTGTGCAAGCATATTATCAAGTGTATTATCAAACA ATCCTGTAATAGTAAAAGACGATACTTTTGATATTGGATCATCTATTTTGGAATGGATGGGACTACCAGAAGTGATAAAC CACAACTTCATTTGGCTACTTGGTTCTAACGGAATGGTTCAATATATAAGCATCCAATAA
Upstream 100 bases:
>100_bases AGTAGGCGTTATAGGCTTAACCCTTGCTTCCTGTGGCGGTGGAGGCGGAGGTGGTGGCAGTTCACAAACCCAAACATAAA TATCAGCCAATCCAATAGCG
Downstream 100 bases:
>100_bases AATTTAAGAGCCTGCTTTATGCAGGCTTTTTAAACATTAACTCACACATTTTATTGTTTTGGTGTTGATTATAAAAATTG CGCTCACAATACATTTACCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MNIYAGSRILSSATVPSNIPVIVVYINGQPVNLLFDTGASGVLVNQGTFPIPQSAYTSQTFYGHFGDGTVFSGTVANVQV CLTSASTDCINMPVAVNSNTSGTNAPFPTGNYIVGDFGMDCGQNTFASFDSTNIIVNTFCPLYYLWQQNQYFNAYSLSFY PLSNTYYATPGFTTPIGSITLGSFSANNLISYTGNGNAPYVNANYPNSLTYITIYDTGTPIIRMTNDVLSAEIPYFNIYT DGNNCSGSNWIQGGYPISYSIPLANSSSSLTISFTTEPPANMCASILSSVLSNNPVIVKDDTFDIGSSILEWMGLPEVIN HNFIWLLGSNGMVQYISIQ
Sequences:
>Translated_339_residues MNIYAGSRILSSATVPSNIPVIVVYINGQPVNLLFDTGASGVLVNQGTFPIPQSAYTSQTFYGHFGDGTVFSGTVANVQV CLTSASTDCINMPVAVNSNTSGTNAPFPTGNYIVGDFGMDCGQNTFASFDSTNIIVNTFCPLYYLWQQNQYFNAYSLSFY PLSNTYYATPGFTTPIGSITLGSFSANNLISYTGNGNAPYVNANYPNSLTYITIYDTGTPIIRMTNDVLSAEIPYFNIYT DGNNCSGSNWIQGGYPISYSIPLANSSSSLTISFTTEPPANMCASILSSVLSNNPVIVKDDTFDIGSSILEWMGLPEVIN HNFIWLLGSNGMVQYISIQ >Mature_339_residues MNIYAGSRILSSATVPSNIPVIVVYINGQPVNLLFDTGASGVLVNQGTFPIPQSAYTSQTFYGHFGDGTVFSGTVANVQV CLTSASTDCINMPVAVNSNTSGTNAPFPTGNYIVGDFGMDCGQNTFASFDSTNIIVNTFCPLYYLWQQNQYFNAYSLSFY PLSNTYYATPGFTTPIGSITLGSFSANNLISYTGNGNAPYVNANYPNSLTYITIYDTGTPIIRMTNDVLSAEIPYFNIYT DGNNCSGSNWIQGGYPISYSIPLANSSSSLTISFTTEPPANMCASILSSVLSNNPVIVKDDTFDIGSSILEWMGLPEVIN HNFIWLLGSNGMVQYISIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36493; Mature: 36493
Theoretical pI: Translated: 3.66; Mature: 3.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIYAGSRILSSATVPSNIPVIVVYINGQPVNLLFDTGASGVLVNQGTFPIPQSAYTSQT CCEECCCEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCE FYGHFGDGTVFSGTVANVQVCLTSASTDCINMPVAVNSNTSGTNAPFPTGNYIVGDFGMD EEEECCCCCEEECEEEEEEEEEEECCCCEEECCEEECCCCCCCCCCCCCCCEEEEECCCC CGQNTFASFDSTNIIVNTFCPLYYLWQQNQYFNAYSLSFYPLSNTYYATPGFTTPIGSIT CCCCCCCCCCCCCEEEEECCCEEEEECCCCCCEEEEEEEEECCCEEEECCCCCCCCCCEE LGSFSANNLISYTGNGNAPYVNANYPNSLTYITIYDTGTPIIRMTNDVLSAEIPYFNIYT ECCCCCCCEEEECCCCCCCEEECCCCCCEEEEEEEECCCCEEEEECCHHEECCCEEEEEE DGNNCSGSNWIQGGYPISYSIPLANSSSSLTISFTTEPPANMCASILSSVLSNNPVIVKD CCCCCCCCCEECCCEEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEC DTFDIGSSILEWMGLPEVINHNFIWLLGSNGMVQYISIQ CCHHHHHHHHHHCCCHHHHCCCEEEEECCCCEEEEEEEC >Mature Secondary Structure MNIYAGSRILSSATVPSNIPVIVVYINGQPVNLLFDTGASGVLVNQGTFPIPQSAYTSQT CCEECCCEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCE FYGHFGDGTVFSGTVANVQVCLTSASTDCINMPVAVNSNTSGTNAPFPTGNYIVGDFGMD EEEECCCCCEEECEEEEEEEEEEECCCCEEECCEEECCCCCCCCCCCCCCCEEEEECCCC CGQNTFASFDSTNIIVNTFCPLYYLWQQNQYFNAYSLSFYPLSNTYYATPGFTTPIGSIT CCCCCCCCCCCCCEEEEECCCEEEEECCCCCCEEEEEEEEECCCEEEECCCCCCCCCCEE LGSFSANNLISYTGNGNAPYVNANYPNSLTYITIYDTGTPIIRMTNDVLSAEIPYFNIYT ECCCCCCCEEEECCCCCCCEEECCCCCCEEEEEEEECCCCEEEEECCHHEECCCEEEEEE DGNNCSGSNWIQGGYPISYSIPLANSSSSLTISFTTEPPANMCASILSSVLSNNPVIVKD CCCCCCCCCEECCCEEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEC DTFDIGSSILEWMGLPEVINHNFIWLLGSNGMVQYISIQ CCHHHHHHHHHHCCCHHHHCCCEEEEECCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA