Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is 195952991

Identifier: 195952991

GI number: 195952991

Start: 550856

End: 551218

Strand: Direct

Name: 195952991

Synonym: HY04AAS1_0616

Alternate gene names: NA

Gene position: 550856-551218 (Clockwise)

Preceding gene: 195952988

Following gene: 195952992

Centisome position: 35.32

GC content: 41.32

Gene sequence:

>363_bases
ATGCAACTATTTTTGAACCAGCCGTTCACACCACAAAACAATGTGGTAAGTCAAAAAGTAGTGGGTAATCAGTCCAACAA
GTCTGCCACGGTTCACATCTACACAGTCCAAGGTAATACTTTCCAGTACAAGGTATATACCGATGCTAACAACAACATCA
CCAAAGTAATAGCTATCTCCTCAAGAGAGTTAGCCCCAGTATCTTACTTTATCCAAAACCCACAAAACTGCCAAAAACAG
CTTATCACAAGAATACCTCTAAGGATGGCATCCTATGAGTACACCTGTCCCACTGGCACATACAAGTATACTACCTTTGG
AACCATAGGTTTTCTAACAACAACAGCGGAGGTGGTAAGATGA

Upstream 100 bases:

>100_bases
GTTTGATGTATTATAGTTTTAGCGGCATGTGTTTATAATATTAAACTAATTTCTACACGATGCGGTATAATAAAAAACTA
AACTTAAAAGGAGGTGTAAT

Downstream 100 bases:

>100_bases
AGAAGGTGAACGCTAAACAACTTTTGGCAGTAGGCGTTATAGGCTTAACCCTTGCTTCCTGTGGCGGTGGAGGCGGAGGT
GGTGGCAGTTCACAAACCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MQLFLNQPFTPQNNVVSQKVVGNQSNKSATVHIYTVQGNTFQYKVYTDANNNITKVIAISSRELAPVSYFIQNPQNCQKQ
LITRIPLRMASYEYTCPTGTYKYTTFGTIGFLTTTAEVVR

Sequences:

>Translated_120_residues
MQLFLNQPFTPQNNVVSQKVVGNQSNKSATVHIYTVQGNTFQYKVYTDANNNITKVIAISSRELAPVSYFIQNPQNCQKQ
LITRIPLRMASYEYTCPTGTYKYTTFGTIGFLTTTAEVVR
>Mature_120_residues
MQLFLNQPFTPQNNVVSQKVVGNQSNKSATVHIYTVQGNTFQYKVYTDANNNITKVIAISSRELAPVSYFIQNPQNCQKQ
LITRIPLRMASYEYTCPTGTYKYTTFGTIGFLTTTAEVVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13570; Mature: 13570

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLFLNQPFTPQNNVVSQKVVGNQSNKSATVHIYTVQGNTFQYKVYTDANNNITKVIAIS
CEEECCCCCCCCCCCEEEHCCCCCCCCCEEEEEEEEECCEEEEEEEECCCCCEEEEEEEC
SRELAPVSYFIQNPQNCQKQLITRIPLRMASYEYTCPTGTYKYTTFGTIGFLTTTAEVVR
CCCCCEEEEEECCCCHHHHHHHHHCCHHHCCEEEECCCCCEEEEEECEEEEEEHHHHHCC
>Mature Secondary Structure
MQLFLNQPFTPQNNVVSQKVVGNQSNKSATVHIYTVQGNTFQYKVYTDANNNITKVIAIS
CEEECCCCCCCCCCCEEEHCCCCCCCCCEEEEEEEEECCEEEEEEEECCCCCEEEEEEEC
SRELAPVSYFIQNPQNCQKQLITRIPLRMASYEYTCPTGTYKYTTFGTIGFLTTTAEVVR
CCCCCEEEEEECCCCHHHHHHHHHCCHHHCCEEEECCCCCEEEEEECEEEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA