Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
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Accession | NC_011126 |
Length | 1,559,514 |
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The map label for this gene is 195952682
Identifier: 195952682
GI number: 195952682
Start: 262085
End: 264298
Strand: Direct
Name: 195952682
Synonym: HY04AAS1_0304
Alternate gene names: NA
Gene position: 262085-264298 (Clockwise)
Preceding gene: 195952681
Following gene: 195952683
Centisome position: 16.81
GC content: 35.19
Gene sequence:
>2214_bases ATGGAGATAATAAGAGTAAAAAAGACTTTTAAGCATCCTTACGCCGGTGGTGCAGATTTTCACACATTCATGGAAAAAAG CAGGTATGTGATAGCAAGAGACCTAATGGCTCAGCTTCCAAGAGATAACTACGAACAAACCAAAGTTCCAGAACTACCAA AAGAATATTACGGTGAAGATTTAAATGGGAAAAGTTTGCTCGTTTTGAACTTGTTTGCTCTTGGTGACTCTTTAATGTTT ACACCAATCTTAAAGCATCTTAAAACTAAGTATCCTAAAAGCTACATAATAATGGAAACAAGAAAAGGGTATAACCTATT AGAAGGTAATCCTTATGTGGACGAGTTTATATACACACCGGTCTCTTACACAAGATTTAAAGAAGTAGATTATTATACCG ATTGCTATGAGTACGTTGGTTCTTATTTCTACAACTATATGAATTTGGTGGATTTTTGGGCTGCAAAGTTAAGACAGTTT GACATAAAAGATAAAGACCCTGTGGTAGTCCCGCAGCAAGAAGCTATAGATTACATGAAGTCTATTGTTCAAAAGATAAA AGATGAAAATCCTGGTAAAAAGATAATTATGGCACATATGGTGGCTTCATCTATACATAGAAGCTTGCCTCCTTATCTTG TATCAAAAATAATAGATAAAATGAAAGATGAGTATGTTTTTATTACCGCCCATCCAAAATGGGAAGCTCCAGCTGTAGAT ATATCAAAAGAGCTTTATATGATGGATGTGGAGAATTTATCCCCTTATATGGAAAAACCCCAGTACCTTGTAGCGGCAAT TCAAGAAGTAGATGGAGTTATTTCAGCGGATACAGTTGTACCACACATAGCAGCGGCGTTAAAAAAACCATGTGTAGTAA TATCTGGTGGTGTCGCCCCAGAGTCTCAGCATTTTCCTAAAATGAGTTATACTACGGCACAACCAGTTTACGCAAGATAT ATCGGTAATACATGTTCTGCTCCTTGTATAATGCATGCTGTAGCAGGTCCTTGCCAAGAGGCCCAAATAAAACAAAAATT TTACAGCCCTTGTTTTGACAACATAAATGTAGAAGAAGTGGTGGAAAAGTTTAAAACCCTCGTTTACTACATAGAAAACA AAGATAAAGACATACCAGATGAGTGTCCTATTTGTAAGGAAAAAAATGTATTTTTTGAAGAAGTGGAGATCTCCTGGGGA TATAGACTTTGGGAATGTAGCGTTTGTGGTTCTATATTCTCTTTGCCAAGAAAAGCCAAAAAAACCCTGGATGATCTATT GAAAGAAGACTACCCAAATTCCCAACAGATTCAACCTTTTTACGATACAAAAGATACACAGCAGATTGATGAGCTTGATA ACAAAGAAAAGCTTGGTATTTCAAATATATATACCATATACACCTACCCTACTATAAGAGCTTTGTTGGATATAGAACCT GCTCTAAAAGGCAAAAAAATGCTTGATATAGGTTTTAACAGCGGTAGGCTTTTGGCTGTAGCCCACGAACTTCTAAACTT AGATGTATATGGTGTAGAACGCTCAGAAAACCAAGTAGAAAAGGTTAAAAAAGCTCTTAAAGATATAAAAATAGATATTG CTAAAGTCCTGGATCATAAATATATTAAAAACCTAAAGCAAAAATGGGGAAGCTTTGGTATTGTGATTTTAGAAAATATA ATAGGAAACTTGGAATATCCATACGAATTTTTTAAAGCTGTAAAAGATTTGATGGAAGAAGATGGAATTGTCATATTTAC ATTTCCTAACAAAGATAGACCTTATATAAAAGTTAGAAAAGGTTTAGACTGGTCTGTGGAAGACAATGATTATAACTATA CTCTTAATAGAGTAAGCGTTAGAGGGTTAGAGATAGCCTTGAGAAAAGCGGGATGGAATTATACTTATGGCAATGCTACC CCGATTTTTCCGGGTGATATAGTACAAATCATGGGTCCACCCCCAGTTTTGACTTTAAATACTGGCAACAACCAACAAAT GAACATAAACCCAGCTGGCATGGAGACATATATTTATAACTACATGAAACCTATATTTAACGCTTTTTCCCTACATGGTC AATTTGGTATAGTGCTAGCTTCTAAAAAGCCTATAAACAACTACTGGTTTAAAAGGCTTGATGTATTGTGGGAACTTATC CAAACAAACGTTATGAGAAGAGAGTATATAGTAAATACATATTTAGAGCGATGA
Upstream 100 bases:
>100_bases TACGATCTTACCAGAAGGGGTGTGACGCCGGTAATATACAACGTTGCATCTTCTTTGATGAATGTAGAGTTTATAAGATA TTTAAAGAGGATGGGTTGAT
Downstream 100 bases:
>100_bases AGATAAAGCTTAAGATAAAAAGACAGGATAGGTTTGAAACTTACGAAGTGCCCTACAAAGAGGGTATGACGCTTTTAGAC GCTTTAAAGTATATAAAAGA
Product: type 11 methyltransferase
Products: NA
Alternate protein names: Methyltransferase Type
Number of amino acids: Translated: 737; Mature: 737
Protein sequence:
>737_residues MEIIRVKKTFKHPYAGGADFHTFMEKSRYVIARDLMAQLPRDNYEQTKVPELPKEYYGEDLNGKSLLVLNLFALGDSLMF TPILKHLKTKYPKSYIIMETRKGYNLLEGNPYVDEFIYTPVSYTRFKEVDYYTDCYEYVGSYFYNYMNLVDFWAAKLRQF DIKDKDPVVVPQQEAIDYMKSIVQKIKDENPGKKIIMAHMVASSIHRSLPPYLVSKIIDKMKDEYVFITAHPKWEAPAVD ISKELYMMDVENLSPYMEKPQYLVAAIQEVDGVISADTVVPHIAAALKKPCVVISGGVAPESQHFPKMSYTTAQPVYARY IGNTCSAPCIMHAVAGPCQEAQIKQKFYSPCFDNINVEEVVEKFKTLVYYIENKDKDIPDECPICKEKNVFFEEVEISWG YRLWECSVCGSIFSLPRKAKKTLDDLLKEDYPNSQQIQPFYDTKDTQQIDELDNKEKLGISNIYTIYTYPTIRALLDIEP ALKGKKMLDIGFNSGRLLAVAHELLNLDVYGVERSENQVEKVKKALKDIKIDIAKVLDHKYIKNLKQKWGSFGIVILENI IGNLEYPYEFFKAVKDLMEEDGIVIFTFPNKDRPYIKVRKGLDWSVEDNDYNYTLNRVSVRGLEIALRKAGWNYTYGNAT PIFPGDIVQIMGPPPVLTLNTGNNQQMNINPAGMETYIYNYMKPIFNAFSLHGQFGIVLASKKPINNYWFKRLDVLWELI QTNVMRREYIVNTYLER
Sequences:
>Translated_737_residues MEIIRVKKTFKHPYAGGADFHTFMEKSRYVIARDLMAQLPRDNYEQTKVPELPKEYYGEDLNGKSLLVLNLFALGDSLMF TPILKHLKTKYPKSYIIMETRKGYNLLEGNPYVDEFIYTPVSYTRFKEVDYYTDCYEYVGSYFYNYMNLVDFWAAKLRQF DIKDKDPVVVPQQEAIDYMKSIVQKIKDENPGKKIIMAHMVASSIHRSLPPYLVSKIIDKMKDEYVFITAHPKWEAPAVD ISKELYMMDVENLSPYMEKPQYLVAAIQEVDGVISADTVVPHIAAALKKPCVVISGGVAPESQHFPKMSYTTAQPVYARY IGNTCSAPCIMHAVAGPCQEAQIKQKFYSPCFDNINVEEVVEKFKTLVYYIENKDKDIPDECPICKEKNVFFEEVEISWG YRLWECSVCGSIFSLPRKAKKTLDDLLKEDYPNSQQIQPFYDTKDTQQIDELDNKEKLGISNIYTIYTYPTIRALLDIEP ALKGKKMLDIGFNSGRLLAVAHELLNLDVYGVERSENQVEKVKKALKDIKIDIAKVLDHKYIKNLKQKWGSFGIVILENI IGNLEYPYEFFKAVKDLMEEDGIVIFTFPNKDRPYIKVRKGLDWSVEDNDYNYTLNRVSVRGLEIALRKAGWNYTYGNAT PIFPGDIVQIMGPPPVLTLNTGNNQQMNINPAGMETYIYNYMKPIFNAFSLHGQFGIVLASKKPINNYWFKRLDVLWELI QTNVMRREYIVNTYLER >Mature_737_residues MEIIRVKKTFKHPYAGGADFHTFMEKSRYVIARDLMAQLPRDNYEQTKVPELPKEYYGEDLNGKSLLVLNLFALGDSLMF TPILKHLKTKYPKSYIIMETRKGYNLLEGNPYVDEFIYTPVSYTRFKEVDYYTDCYEYVGSYFYNYMNLVDFWAAKLRQF DIKDKDPVVVPQQEAIDYMKSIVQKIKDENPGKKIIMAHMVASSIHRSLPPYLVSKIIDKMKDEYVFITAHPKWEAPAVD ISKELYMMDVENLSPYMEKPQYLVAAIQEVDGVISADTVVPHIAAALKKPCVVISGGVAPESQHFPKMSYTTAQPVYARY IGNTCSAPCIMHAVAGPCQEAQIKQKFYSPCFDNINVEEVVEKFKTLVYYIENKDKDIPDECPICKEKNVFFEEVEISWG YRLWECSVCGSIFSLPRKAKKTLDDLLKEDYPNSQQIQPFYDTKDTQQIDELDNKEKLGISNIYTIYTYPTIRALLDIEP ALKGKKMLDIGFNSGRLLAVAHELLNLDVYGVERSENQVEKVKKALKDIKIDIAKVLDHKYIKNLKQKWGSFGIVILENI IGNLEYPYEFFKAVKDLMEEDGIVIFTFPNKDRPYIKVRKGLDWSVEDNDYNYTLNRVSVRGLEIALRKAGWNYTYGNAT PIFPGDIVQIMGPPPVLTLNTGNNQQMNINPAGMETYIYNYMKPIFNAFSLHGQFGIVLASKKPINNYWFKRLDVLWELI QTNVMRREYIVNTYLER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85247; Mature: 85247
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIIRVKKTFKHPYAGGADFHTFMEKSRYVIARDLMAQLPRDNYEQTKVPELPKEYYGED CCEEEEHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCC LNGKSLLVLNLFALGDSLMFTPILKHLKTKYPKSYIIMETRKGYNLLEGNPYVDEFIYTP CCCCEEEEEEHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHCCC VSYTRFKEVDYYTDCYEYVGSYFYNYMNLVDFWAAKLRQFDIKDKDPVVVPQQEAIDYMK CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHH SIVQKIKDENPGKKIIMAHMVASSIHRSLPPYLVSKIIDKMKDEYVFITAHPKWEAPAVD HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCC ISKELYMMDVENLSPYMEKPQYLVAAIQEVDGVISADTVVPHIAAALKKPCVVISGGVAP CCCCEEEEEHHHCCHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCCC ESQHFPKMSYTTAQPVYARYIGNTCSAPCIMHAVAGPCQEAQIKQKFYSPCFDNINVEEV CCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHH VEKFKTLVYYIENKDKDIPDECPICKEKNVFFEEVEISWGYRLWECSVCGSIFSLPRKAK HHHHHHHEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEHHHHHHHHHCCHHHH KTLDDLLKEDYPNSQQIQPFYDTKDTQQIDELDNKEKLGISNIYTIYTYPTIRALLDIEP HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHCCCH ALKGKKMLDIGFNSGRLLAVAHELLNLDVYGVERSENQVEKVKKALKDIKIDIAKVLDHK HHCCCEEEEECCCCCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH YIKNLKQKWGSFGIVILENIIGNLEYPYEFFKAVKDLMEEDGIVIFTFPNKDRPYIKVRK HHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEC GLDWSVEDNDYNYTLNRVSVRGLEIALRKAGWNYTYGNATPIFPGDIVQIMGPPPVLTLN CCCCCCCCCCCEEEEEEEEECHHHEEEECCCCCEECCCCCCCCCCCHHEECCCCCEEEEE TGNNQQMNINPAGMETYIYNYMKPIFNAFSLHGQFGIVLASKKPINNYWFKRLDVLWELI CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHH QTNVMRREYIVNTYLER HHHHHHHHHHHHHHHCC >Mature Secondary Structure MEIIRVKKTFKHPYAGGADFHTFMEKSRYVIARDLMAQLPRDNYEQTKVPELPKEYYGED CCEEEEHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCC LNGKSLLVLNLFALGDSLMFTPILKHLKTKYPKSYIIMETRKGYNLLEGNPYVDEFIYTP CCCCEEEEEEHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHCCC VSYTRFKEVDYYTDCYEYVGSYFYNYMNLVDFWAAKLRQFDIKDKDPVVVPQQEAIDYMK CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHH SIVQKIKDENPGKKIIMAHMVASSIHRSLPPYLVSKIIDKMKDEYVFITAHPKWEAPAVD HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCC ISKELYMMDVENLSPYMEKPQYLVAAIQEVDGVISADTVVPHIAAALKKPCVVISGGVAP CCCCEEEEEHHHCCHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCCC ESQHFPKMSYTTAQPVYARYIGNTCSAPCIMHAVAGPCQEAQIKQKFYSPCFDNINVEEV CCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHH VEKFKTLVYYIENKDKDIPDECPICKEKNVFFEEVEISWGYRLWECSVCGSIFSLPRKAK HHHHHHHEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEHHHHHHHHHCCHHHH KTLDDLLKEDYPNSQQIQPFYDTKDTQQIDELDNKEKLGISNIYTIYTYPTIRALLDIEP HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHCCCH ALKGKKMLDIGFNSGRLLAVAHELLNLDVYGVERSENQVEKVKKALKDIKIDIAKVLDHK HHCCCEEEEECCCCCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH YIKNLKQKWGSFGIVILENIIGNLEYPYEFFKAVKDLMEEDGIVIFTFPNKDRPYIKVRK HHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEC GLDWSVEDNDYNYTLNRVSVRGLEIALRKAGWNYTYGNATPIFPGDIVQIMGPPPVLTLN CCCCCCCCCCCEEEEEEEEECHHHEEEECCCCCEECCCCCCCCCCCHHEECCCCCEEEEE TGNNQQMNINPAGMETYIYNYMKPIFNAFSLHGQFGIVLASKKPINNYWFKRLDVLWELI CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHH QTNVMRREYIVNTYLER HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA