Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is 195952682

Identifier: 195952682

GI number: 195952682

Start: 262085

End: 264298

Strand: Direct

Name: 195952682

Synonym: HY04AAS1_0304

Alternate gene names: NA

Gene position: 262085-264298 (Clockwise)

Preceding gene: 195952681

Following gene: 195952683

Centisome position: 16.81

GC content: 35.19

Gene sequence:

>2214_bases
ATGGAGATAATAAGAGTAAAAAAGACTTTTAAGCATCCTTACGCCGGTGGTGCAGATTTTCACACATTCATGGAAAAAAG
CAGGTATGTGATAGCAAGAGACCTAATGGCTCAGCTTCCAAGAGATAACTACGAACAAACCAAAGTTCCAGAACTACCAA
AAGAATATTACGGTGAAGATTTAAATGGGAAAAGTTTGCTCGTTTTGAACTTGTTTGCTCTTGGTGACTCTTTAATGTTT
ACACCAATCTTAAAGCATCTTAAAACTAAGTATCCTAAAAGCTACATAATAATGGAAACAAGAAAAGGGTATAACCTATT
AGAAGGTAATCCTTATGTGGACGAGTTTATATACACACCGGTCTCTTACACAAGATTTAAAGAAGTAGATTATTATACCG
ATTGCTATGAGTACGTTGGTTCTTATTTCTACAACTATATGAATTTGGTGGATTTTTGGGCTGCAAAGTTAAGACAGTTT
GACATAAAAGATAAAGACCCTGTGGTAGTCCCGCAGCAAGAAGCTATAGATTACATGAAGTCTATTGTTCAAAAGATAAA
AGATGAAAATCCTGGTAAAAAGATAATTATGGCACATATGGTGGCTTCATCTATACATAGAAGCTTGCCTCCTTATCTTG
TATCAAAAATAATAGATAAAATGAAAGATGAGTATGTTTTTATTACCGCCCATCCAAAATGGGAAGCTCCAGCTGTAGAT
ATATCAAAAGAGCTTTATATGATGGATGTGGAGAATTTATCCCCTTATATGGAAAAACCCCAGTACCTTGTAGCGGCAAT
TCAAGAAGTAGATGGAGTTATTTCAGCGGATACAGTTGTACCACACATAGCAGCGGCGTTAAAAAAACCATGTGTAGTAA
TATCTGGTGGTGTCGCCCCAGAGTCTCAGCATTTTCCTAAAATGAGTTATACTACGGCACAACCAGTTTACGCAAGATAT
ATCGGTAATACATGTTCTGCTCCTTGTATAATGCATGCTGTAGCAGGTCCTTGCCAAGAGGCCCAAATAAAACAAAAATT
TTACAGCCCTTGTTTTGACAACATAAATGTAGAAGAAGTGGTGGAAAAGTTTAAAACCCTCGTTTACTACATAGAAAACA
AAGATAAAGACATACCAGATGAGTGTCCTATTTGTAAGGAAAAAAATGTATTTTTTGAAGAAGTGGAGATCTCCTGGGGA
TATAGACTTTGGGAATGTAGCGTTTGTGGTTCTATATTCTCTTTGCCAAGAAAAGCCAAAAAAACCCTGGATGATCTATT
GAAAGAAGACTACCCAAATTCCCAACAGATTCAACCTTTTTACGATACAAAAGATACACAGCAGATTGATGAGCTTGATA
ACAAAGAAAAGCTTGGTATTTCAAATATATATACCATATACACCTACCCTACTATAAGAGCTTTGTTGGATATAGAACCT
GCTCTAAAAGGCAAAAAAATGCTTGATATAGGTTTTAACAGCGGTAGGCTTTTGGCTGTAGCCCACGAACTTCTAAACTT
AGATGTATATGGTGTAGAACGCTCAGAAAACCAAGTAGAAAAGGTTAAAAAAGCTCTTAAAGATATAAAAATAGATATTG
CTAAAGTCCTGGATCATAAATATATTAAAAACCTAAAGCAAAAATGGGGAAGCTTTGGTATTGTGATTTTAGAAAATATA
ATAGGAAACTTGGAATATCCATACGAATTTTTTAAAGCTGTAAAAGATTTGATGGAAGAAGATGGAATTGTCATATTTAC
ATTTCCTAACAAAGATAGACCTTATATAAAAGTTAGAAAAGGTTTAGACTGGTCTGTGGAAGACAATGATTATAACTATA
CTCTTAATAGAGTAAGCGTTAGAGGGTTAGAGATAGCCTTGAGAAAAGCGGGATGGAATTATACTTATGGCAATGCTACC
CCGATTTTTCCGGGTGATATAGTACAAATCATGGGTCCACCCCCAGTTTTGACTTTAAATACTGGCAACAACCAACAAAT
GAACATAAACCCAGCTGGCATGGAGACATATATTTATAACTACATGAAACCTATATTTAACGCTTTTTCCCTACATGGTC
AATTTGGTATAGTGCTAGCTTCTAAAAAGCCTATAAACAACTACTGGTTTAAAAGGCTTGATGTATTGTGGGAACTTATC
CAAACAAACGTTATGAGAAGAGAGTATATAGTAAATACATATTTAGAGCGATGA

Upstream 100 bases:

>100_bases
TACGATCTTACCAGAAGGGGTGTGACGCCGGTAATATACAACGTTGCATCTTCTTTGATGAATGTAGAGTTTATAAGATA
TTTAAAGAGGATGGGTTGAT

Downstream 100 bases:

>100_bases
AGATAAAGCTTAAGATAAAAAGACAGGATAGGTTTGAAACTTACGAAGTGCCCTACAAAGAGGGTATGACGCTTTTAGAC
GCTTTAAAGTATATAAAAGA

Product: type 11 methyltransferase

Products: NA

Alternate protein names: Methyltransferase Type

Number of amino acids: Translated: 737; Mature: 737

Protein sequence:

>737_residues
MEIIRVKKTFKHPYAGGADFHTFMEKSRYVIARDLMAQLPRDNYEQTKVPELPKEYYGEDLNGKSLLVLNLFALGDSLMF
TPILKHLKTKYPKSYIIMETRKGYNLLEGNPYVDEFIYTPVSYTRFKEVDYYTDCYEYVGSYFYNYMNLVDFWAAKLRQF
DIKDKDPVVVPQQEAIDYMKSIVQKIKDENPGKKIIMAHMVASSIHRSLPPYLVSKIIDKMKDEYVFITAHPKWEAPAVD
ISKELYMMDVENLSPYMEKPQYLVAAIQEVDGVISADTVVPHIAAALKKPCVVISGGVAPESQHFPKMSYTTAQPVYARY
IGNTCSAPCIMHAVAGPCQEAQIKQKFYSPCFDNINVEEVVEKFKTLVYYIENKDKDIPDECPICKEKNVFFEEVEISWG
YRLWECSVCGSIFSLPRKAKKTLDDLLKEDYPNSQQIQPFYDTKDTQQIDELDNKEKLGISNIYTIYTYPTIRALLDIEP
ALKGKKMLDIGFNSGRLLAVAHELLNLDVYGVERSENQVEKVKKALKDIKIDIAKVLDHKYIKNLKQKWGSFGIVILENI
IGNLEYPYEFFKAVKDLMEEDGIVIFTFPNKDRPYIKVRKGLDWSVEDNDYNYTLNRVSVRGLEIALRKAGWNYTYGNAT
PIFPGDIVQIMGPPPVLTLNTGNNQQMNINPAGMETYIYNYMKPIFNAFSLHGQFGIVLASKKPINNYWFKRLDVLWELI
QTNVMRREYIVNTYLER

Sequences:

>Translated_737_residues
MEIIRVKKTFKHPYAGGADFHTFMEKSRYVIARDLMAQLPRDNYEQTKVPELPKEYYGEDLNGKSLLVLNLFALGDSLMF
TPILKHLKTKYPKSYIIMETRKGYNLLEGNPYVDEFIYTPVSYTRFKEVDYYTDCYEYVGSYFYNYMNLVDFWAAKLRQF
DIKDKDPVVVPQQEAIDYMKSIVQKIKDENPGKKIIMAHMVASSIHRSLPPYLVSKIIDKMKDEYVFITAHPKWEAPAVD
ISKELYMMDVENLSPYMEKPQYLVAAIQEVDGVISADTVVPHIAAALKKPCVVISGGVAPESQHFPKMSYTTAQPVYARY
IGNTCSAPCIMHAVAGPCQEAQIKQKFYSPCFDNINVEEVVEKFKTLVYYIENKDKDIPDECPICKEKNVFFEEVEISWG
YRLWECSVCGSIFSLPRKAKKTLDDLLKEDYPNSQQIQPFYDTKDTQQIDELDNKEKLGISNIYTIYTYPTIRALLDIEP
ALKGKKMLDIGFNSGRLLAVAHELLNLDVYGVERSENQVEKVKKALKDIKIDIAKVLDHKYIKNLKQKWGSFGIVILENI
IGNLEYPYEFFKAVKDLMEEDGIVIFTFPNKDRPYIKVRKGLDWSVEDNDYNYTLNRVSVRGLEIALRKAGWNYTYGNAT
PIFPGDIVQIMGPPPVLTLNTGNNQQMNINPAGMETYIYNYMKPIFNAFSLHGQFGIVLASKKPINNYWFKRLDVLWELI
QTNVMRREYIVNTYLER
>Mature_737_residues
MEIIRVKKTFKHPYAGGADFHTFMEKSRYVIARDLMAQLPRDNYEQTKVPELPKEYYGEDLNGKSLLVLNLFALGDSLMF
TPILKHLKTKYPKSYIIMETRKGYNLLEGNPYVDEFIYTPVSYTRFKEVDYYTDCYEYVGSYFYNYMNLVDFWAAKLRQF
DIKDKDPVVVPQQEAIDYMKSIVQKIKDENPGKKIIMAHMVASSIHRSLPPYLVSKIIDKMKDEYVFITAHPKWEAPAVD
ISKELYMMDVENLSPYMEKPQYLVAAIQEVDGVISADTVVPHIAAALKKPCVVISGGVAPESQHFPKMSYTTAQPVYARY
IGNTCSAPCIMHAVAGPCQEAQIKQKFYSPCFDNINVEEVVEKFKTLVYYIENKDKDIPDECPICKEKNVFFEEVEISWG
YRLWECSVCGSIFSLPRKAKKTLDDLLKEDYPNSQQIQPFYDTKDTQQIDELDNKEKLGISNIYTIYTYPTIRALLDIEP
ALKGKKMLDIGFNSGRLLAVAHELLNLDVYGVERSENQVEKVKKALKDIKIDIAKVLDHKYIKNLKQKWGSFGIVILENI
IGNLEYPYEFFKAVKDLMEEDGIVIFTFPNKDRPYIKVRKGLDWSVEDNDYNYTLNRVSVRGLEIALRKAGWNYTYGNAT
PIFPGDIVQIMGPPPVLTLNTGNNQQMNINPAGMETYIYNYMKPIFNAFSLHGQFGIVLASKKPINNYWFKRLDVLWELI
QTNVMRREYIVNTYLER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85247; Mature: 85247

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIIRVKKTFKHPYAGGADFHTFMEKSRYVIARDLMAQLPRDNYEQTKVPELPKEYYGED
CCEEEEHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCC
LNGKSLLVLNLFALGDSLMFTPILKHLKTKYPKSYIIMETRKGYNLLEGNPYVDEFIYTP
CCCCEEEEEEHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHCCC
VSYTRFKEVDYYTDCYEYVGSYFYNYMNLVDFWAAKLRQFDIKDKDPVVVPQQEAIDYMK
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHH
SIVQKIKDENPGKKIIMAHMVASSIHRSLPPYLVSKIIDKMKDEYVFITAHPKWEAPAVD
HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCC
ISKELYMMDVENLSPYMEKPQYLVAAIQEVDGVISADTVVPHIAAALKKPCVVISGGVAP
CCCCEEEEEHHHCCHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCCC
ESQHFPKMSYTTAQPVYARYIGNTCSAPCIMHAVAGPCQEAQIKQKFYSPCFDNINVEEV
CCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHH
VEKFKTLVYYIENKDKDIPDECPICKEKNVFFEEVEISWGYRLWECSVCGSIFSLPRKAK
HHHHHHHEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEHHHHHHHHHCCHHHH
KTLDDLLKEDYPNSQQIQPFYDTKDTQQIDELDNKEKLGISNIYTIYTYPTIRALLDIEP
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHCCCH
ALKGKKMLDIGFNSGRLLAVAHELLNLDVYGVERSENQVEKVKKALKDIKIDIAKVLDHK
HHCCCEEEEECCCCCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YIKNLKQKWGSFGIVILENIIGNLEYPYEFFKAVKDLMEEDGIVIFTFPNKDRPYIKVRK
HHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEC
GLDWSVEDNDYNYTLNRVSVRGLEIALRKAGWNYTYGNATPIFPGDIVQIMGPPPVLTLN
CCCCCCCCCCCEEEEEEEEECHHHEEEECCCCCEECCCCCCCCCCCHHEECCCCCEEEEE
TGNNQQMNINPAGMETYIYNYMKPIFNAFSLHGQFGIVLASKKPINNYWFKRLDVLWELI
CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHH
QTNVMRREYIVNTYLER
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEIIRVKKTFKHPYAGGADFHTFMEKSRYVIARDLMAQLPRDNYEQTKVPELPKEYYGED
CCEEEEHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCC
LNGKSLLVLNLFALGDSLMFTPILKHLKTKYPKSYIIMETRKGYNLLEGNPYVDEFIYTP
CCCCEEEEEEHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHCCC
VSYTRFKEVDYYTDCYEYVGSYFYNYMNLVDFWAAKLRQFDIKDKDPVVVPQQEAIDYMK
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHH
SIVQKIKDENPGKKIIMAHMVASSIHRSLPPYLVSKIIDKMKDEYVFITAHPKWEAPAVD
HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCC
ISKELYMMDVENLSPYMEKPQYLVAAIQEVDGVISADTVVPHIAAALKKPCVVISGGVAP
CCCCEEEEEHHHCCHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCCC
ESQHFPKMSYTTAQPVYARYIGNTCSAPCIMHAVAGPCQEAQIKQKFYSPCFDNINVEEV
CCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHH
VEKFKTLVYYIENKDKDIPDECPICKEKNVFFEEVEISWGYRLWECSVCGSIFSLPRKAK
HHHHHHHEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEHHHHHHHHHCCHHHH
KTLDDLLKEDYPNSQQIQPFYDTKDTQQIDELDNKEKLGISNIYTIYTYPTIRALLDIEP
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHCCCH
ALKGKKMLDIGFNSGRLLAVAHELLNLDVYGVERSENQVEKVKKALKDIKIDIAKVLDHK
HHCCCEEEEECCCCCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YIKNLKQKWGSFGIVILENIIGNLEYPYEFFKAVKDLMEEDGIVIFTFPNKDRPYIKVRK
HHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEC
GLDWSVEDNDYNYTLNRVSVRGLEIALRKAGWNYTYGNATPIFPGDIVQIMGPPPVLTLN
CCCCCCCCCCCEEEEEEEEECHHHEEEECCCCCEECCCCCCCCCCCHHEECCCCCEEEEE
TGNNQQMNINPAGMETYIYNYMKPIFNAFSLHGQFGIVLASKKPINNYWFKRLDVLWELI
CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHH
QTNVMRREYIVNTYLER
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA