Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is 195952681

Identifier: 195952681

GI number: 195952681

Start: 261379

End: 262083

Strand: Direct

Name: 195952681

Synonym: HY04AAS1_0303

Alternate gene names: NA

Gene position: 261379-262083 (Clockwise)

Preceding gene: 195952677

Following gene: 195952682

Centisome position: 16.76

GC content: 38.16

Gene sequence:

>705_bases
ATGTTAGGTATATACAACTATCCAAAAGTTATCAATACGGTGGAGGATAAACCTTTAGAAATTTGCATGCCAAAAAACTA
CTCTTTTAGTAGAGATTTTACGATAGTACCGGTGGGCATGTCTGAGTTGGTTTATTTAGCGGCTCTTTATCCTATTGTAT
TCGCTCATCATGAAGGGGTTTTTGCAGCGTTTGCTGTTTTAGGAGGCGATACAAACCACTATCTCACAAAAGATGGCAAA
TGGAAGATAGACCATAAGCCAAAGGTGCTTGACTTTTATCCTTTTGGTGCTATAAGGGATAGGGCTACCAACAACATAGT
GGTCTTTTACGATAAGATGCCAGAAGAGTCCACCGAATGTGAGGAGATGGAATTTATAAATGTGCTTGGCGAGGCTACAG
AACATCTTCAAAGAATATCTCAAATGGCTGTTGGTTTTTATCAGGATTTTGAAATAGCGGCAAATCTTATAAAAGAAATG
CATGATCTTAAAATCTTAAGACAGACGGATTTAGAGTTAAAGATAGACAATGATGAAAAGTTTATTATAGAAGGTGCAGT
GATGCCAGACCCTGGTGTGCTTCTTGGCATTTCTCCAGAAAAGCTTTACGATCTTACCAGAAGGGGTGTGACGCCGGTAA
TATACAACGTTGCATCTTCTTTGATGAATGTAGAGTTTATAAGATATTTAAAGAGGATGGGTTGA

Upstream 100 bases:

>100_bases
CATTAGAAGCCATAATGGATTTACCTTTCTCATATCATATTAAATATAAAAATTTTTTGAATTTTTCAAGCTTTTACGAT
ATATATGATATAATTGTTTT

Downstream 100 bases:

>100_bases
TATGGAGATAATAAGAGTAAAAAAGACTTTTAAGCATCCTTACGCCGGTGGTGCAGATTTTCACACATTCATGGAAAAAA
GCAGGTATGTGATAGCAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MLGIYNYPKVINTVEDKPLEICMPKNYSFSRDFTIVPVGMSELVYLAALYPIVFAHHEGVFAAFAVLGGDTNHYLTKDGK
WKIDHKPKVLDFYPFGAIRDRATNNIVVFYDKMPEESTECEEMEFINVLGEATEHLQRISQMAVGFYQDFEIAANLIKEM
HDLKILRQTDLELKIDNDEKFIIEGAVMPDPGVLLGISPEKLYDLTRRGVTPVIYNVASSLMNVEFIRYLKRMG

Sequences:

>Translated_234_residues
MLGIYNYPKVINTVEDKPLEICMPKNYSFSRDFTIVPVGMSELVYLAALYPIVFAHHEGVFAAFAVLGGDTNHYLTKDGK
WKIDHKPKVLDFYPFGAIRDRATNNIVVFYDKMPEESTECEEMEFINVLGEATEHLQRISQMAVGFYQDFEIAANLIKEM
HDLKILRQTDLELKIDNDEKFIIEGAVMPDPGVLLGISPEKLYDLTRRGVTPVIYNVASSLMNVEFIRYLKRMG
>Mature_234_residues
MLGIYNYPKVINTVEDKPLEICMPKNYSFSRDFTIVPVGMSELVYLAALYPIVFAHHEGVFAAFAVLGGDTNHYLTKDGK
WKIDHKPKVLDFYPFGAIRDRATNNIVVFYDKMPEESTECEEMEFINVLGEATEHLQRISQMAVGFYQDFEIAANLIKEM
HDLKILRQTDLELKIDNDEKFIIEGAVMPDPGVLLGISPEKLYDLTRRGVTPVIYNVASSLMNVEFIRYLKRMG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26769; Mature: 26769

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGIYNYPKVINTVEDKPLEICMPKNYSFSRDFTIVPVGMSELVYLAALYPIVFAHHEGV
CCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCH
FAAFAVLGGDTNHYLTKDGKWKIDHKPKVLDFYPFGAIRDRATNNIVVFYDKMPEESTEC
HHHHHHHCCCCCCEECCCCCEEECCCCCEEEEECCCHHHHCCCCCEEEEEECCCCCCCCH
EEMEFINVLGEATEHLQRISQMAVGFYQDFEIAANLIKEMHDLKILRQTDLELKIDNDEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCE
FIIEGAVMPDPGVLLGISPEKLYDLTRRGVTPVIYNVASSLMNVEFIRYLKRMG
EEEEECCCCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLGIYNYPKVINTVEDKPLEICMPKNYSFSRDFTIVPVGMSELVYLAALYPIVFAHHEGV
CCCCCCCHHHHHCCCCCCEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCH
FAAFAVLGGDTNHYLTKDGKWKIDHKPKVLDFYPFGAIRDRATNNIVVFYDKMPEESTEC
HHHHHHHCCCCCCEECCCCCEEECCCCCEEEEECCCHHHHCCCCCEEEEEECCCCCCCCH
EEMEFINVLGEATEHLQRISQMAVGFYQDFEIAANLIKEMHDLKILRQTDLELKIDNDEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCE
FIIEGAVMPDPGVLLGISPEKLYDLTRRGVTPVIYNVASSLMNVEFIRYLKRMG
EEEEECCCCCCCEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA