BacMap

Definition	Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession	NC_011126
Length	1,559,514

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The map label for this gene is cshA [H]

Identifier: 195952677

GI number: 195952677

Start: 258023

End: 259117

Strand: Direct

Name: cshA [H]

Synonym: HY04AAS1_0299

Alternate gene names: 195952677

Gene position: 258023-259117 (Clockwise)

Preceding gene: 195952676

Following gene: 195952681

Centisome position: 16.55

GC content: 36.44

Gene sequence:

>1095_bases
ATGTCATTATTCTCAAAACTTAGTTTAGAACTACAAAAAGCTTTGGAGGATGCTGGATACAAAGAACCAACACCCATTCA
AAGGGATGCTATTCCTTTAGCGTTGGAAGGTTACGATATCTTGGGACAAGCCGCCACCGGGACAGGGAAGACAGGGGCCT
TTGCTATACCAATAGTGGAAAAGCTTCAAAAGGGGAAACCAGATGTCAAAGCTCTTGTGCTGACACCTACCAGGGAGTTG
GCTATACAGGTAAAAGAGCAAATATATATGCTTACCAAATATAAAAGGCTTTCTTCTTATGTATTTTACGGTGGGACTTC
TGTAAAACAAAATTTGGATATTTTGCAAAATAAAAACGTGGATATCTTGATAGGAACTCCTGGACGTATAAAAGATCTCA
TCGATAGGAAGGCTTTAAATTTGTCAAAAGTAGAATATCTTGTTTTAGATGAATTTGATCAAATGCTTGATATGGGCTTT
ATAGAAGACATAGAATATATAATAAGCTTTTTGCCAAAAGAAAGGACCACTTATATGTTTTCTGCCACTGTACCAAGCCG
TATTGAGCTTTTAGCAAAAAGATTTTTAAAGAGTGATTTCAAATTTGTGAAGGTACAGTCGGTAGAGTTAAAACCAAACA
TAGAAGAGAAGATGATAAAGCTATCTTCACCTGGAGAAAAAATACACGAACTTATGCATATAATAGACACCCATCCTATG
GAAAAAATGTTAATTTTTGTAAAAACTAAAAAAGATGCAAAAGATTTATTTTTCTTGCTTACAAAAAAAGGCATAAGAGC
TCAAGCTCTTCATGGAGATCTCACACAAAGACAGAGGGAAAAAGCTCTAAGTGCATTTAAATCTGGTGCCGTTAGTATAT
TGATAGCTACCGATGTAGCCGCCAGAGGTCTTGATATAAAAGATGTAGGAGTTGTAATAAACTACAACATACCAGAAGAC
CCAGAGCTTTACATACATAGAATAGGAAGAACTGGTAGAATAGGCAAAAGCGGTAAAGCGTTCTCTTTAATATGTCCAGA
GGACTCCAAAGCGTTGTGGCGCATAAAGAAGCTTAGGTCAAAAATATCGGTGTAA

Upstream 100 bases:

>100_bases
ATTACTTGTGTGGGCGGTGTTTGTTGATAATAAAAATAAACGTTGCCTATTCTATAAAATTTACTATATTTATATTAAAA
GATTTATAAGGAGAAACAAA

Downstream 100 bases:

>100_bases
TTTTATTTTATTTTTATGTTTATGCTGTAAAATATATTCATGACTATTTTACTTTATGTGTTCGCTTTTGCGATTTTTGT
AAGCGCTGTGTTGTTTGTGG

Product: DEAD/DEAH box helicase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MSLFSKLSLELQKALEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVEKLQKGKPDVKALVLTPTREL
AIQVKEQIYMLTKYKRLSSYVFYGGTSVKQNLDILQNKNVDILIGTPGRIKDLIDRKALNLSKVEYLVLDEFDQMLDMGF
IEDIEYIISFLPKERTTYMFSATVPSRIELLAKRFLKSDFKFVKVQSVELKPNIEEKMIKLSSPGEKIHELMHIIDTHPM
EKMLIFVKTKKDAKDLFFLLTKKGIRAQALHGDLTQRQREKALSAFKSGAVSILIATDVAARGLDIKDVGVVINYNIPED
PELYIHRIGRTGRIGKSGKAFSLICPEDSKALWRIKKLRSKISV

Sequences:

>Translated_364_residues
MSLFSKLSLELQKALEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVEKLQKGKPDVKALVLTPTREL
AIQVKEQIYMLTKYKRLSSYVFYGGTSVKQNLDILQNKNVDILIGTPGRIKDLIDRKALNLSKVEYLVLDEFDQMLDMGF
IEDIEYIISFLPKERTTYMFSATVPSRIELLAKRFLKSDFKFVKVQSVELKPNIEEKMIKLSSPGEKIHELMHIIDTHPM
EKMLIFVKTKKDAKDLFFLLTKKGIRAQALHGDLTQRQREKALSAFKSGAVSILIATDVAARGLDIKDVGVVINYNIPED
PELYIHRIGRTGRIGKSGKAFSLICPEDSKALWRIKKLRSKISV
>Mature_363_residues
SLFSKLSLELQKALEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVEKLQKGKPDVKALVLTPTRELA
IQVKEQIYMLTKYKRLSSYVFYGGTSVKQNLDILQNKNVDILIGTPGRIKDLIDRKALNLSKVEYLVLDEFDQMLDMGFI
EDIEYIISFLPKERTTYMFSATVPSRIELLAKRFLKSDFKFVKVQSVELKPNIEEKMIKLSSPGEKIHELMHIIDTHPME
KMLIFVKTKKDAKDLFFLLTKKGIRAQALHGDLTQRQREKALSAFKSGAVSILIATDVAARGLDIKDVGVVINYNIPEDP
ELYIHRIGRTGRIGKSGKAFSLICPEDSKALWRIKKLRSKISV

Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI20149629, Length=356, Percent_Identity=41.0112359550562, Blast_Score=243, Evalue=2e-64,
Organism=Homo sapiens, GI148613856, Length=346, Percent_Identity=40.4624277456647, Blast_Score=240, Evalue=1e-63,
Organism=Homo sapiens, GI38201710, Length=346, Percent_Identity=40.4624277456647, Blast_Score=240, Evalue=1e-63,
Organism=Homo sapiens, GI41327771, Length=396, Percent_Identity=37.6262626262626, Blast_Score=239, Evalue=2e-63,
Organism=Homo sapiens, GI224593278, Length=357, Percent_Identity=39.2156862745098, Blast_Score=239, Evalue=3e-63,
Organism=Homo sapiens, GI222352149, Length=356, Percent_Identity=40.1685393258427, Blast_Score=237, Evalue=1e-62,
Organism=Homo sapiens, GI262118318, Length=357, Percent_Identity=38.0952380952381, Blast_Score=233, Evalue=1e-61,
Organism=Homo sapiens, GI301171475, Length=349, Percent_Identity=39.8280802292264, Blast_Score=233, Evalue=2e-61,
Organism=Homo sapiens, GI301171467, Length=349, Percent_Identity=39.8280802292264, Blast_Score=233, Evalue=2e-61,
Organism=Homo sapiens, GI87196351, Length=349, Percent_Identity=39.8280802292264, Blast_Score=233, Evalue=2e-61,
Organism=Homo sapiens, GI216548263, Length=357, Percent_Identity=38.0952380952381, Blast_Score=232, Evalue=5e-61,
Organism=Homo sapiens, GI262231852, Length=357, Percent_Identity=38.0952380952381, Blast_Score=231, Evalue=5e-61,
Organism=Homo sapiens, GI13518015, Length=357, Percent_Identity=38.0952380952381, Blast_Score=231, Evalue=6e-61,
Organism=Homo sapiens, GI4758138, Length=355, Percent_Identity=39.1549295774648, Blast_Score=230, Evalue=1e-60,
Organism=Homo sapiens, GI50659095, Length=360, Percent_Identity=40.2777777777778, Blast_Score=229, Evalue=3e-60,
Organism=Homo sapiens, GI169881239, Length=349, Percent_Identity=40.4011461318052, Blast_Score=229, Evalue=4e-60,
Organism=Homo sapiens, GI13514809, Length=349, Percent_Identity=40.4011461318052, Blast_Score=229, Evalue=4e-60,
Organism=Homo sapiens, GI13129006, Length=362, Percent_Identity=39.5027624309392, Blast_Score=228, Evalue=7e-60,
Organism=Homo sapiens, GI45446747, Length=348, Percent_Identity=37.6436781609195, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI45446743, Length=348, Percent_Identity=37.6436781609195, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI7661920, Length=355, Percent_Identity=34.0845070422535, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI31542656, Length=361, Percent_Identity=38.5041551246537, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI55749865, Length=351, Percent_Identity=38.7464387464387, Blast_Score=219, Evalue=2e-57,
Organism=Homo sapiens, GI41327773, Length=354, Percent_Identity=35.0282485875706, Blast_Score=212, Evalue=5e-55,
Organism=Homo sapiens, GI21040371, Length=361, Percent_Identity=31.8559556786704, Blast_Score=211, Evalue=8e-55,
Organism=Homo sapiens, GI41327779, Length=355, Percent_Identity=35.7746478873239, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI4758112, Length=361, Percent_Identity=32.1329639889197, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI18375623, Length=361, Percent_Identity=32.1329639889197, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI164419743, Length=348, Percent_Identity=36.4942528735632, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI51094101, Length=348, Percent_Identity=36.4942528735632, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI41327776, Length=356, Percent_Identity=37.9213483146067, Blast_Score=209, Evalue=3e-54,
Organism=Homo sapiens, GI164664518, Length=353, Percent_Identity=33.4277620396601, Blast_Score=207, Evalue=1e-53,
Organism=Homo sapiens, GI4503529, Length=352, Percent_Identity=34.9431818181818, Blast_Score=205, Evalue=5e-53,
Organism=Homo sapiens, GI188035877, Length=361, Percent_Identity=33.7950138504155, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI21071032, Length=356, Percent_Identity=35.6741573033708, Blast_Score=203, Evalue=2e-52,
Organism=Homo sapiens, GI83700235, Length=335, Percent_Identity=35.8208955223881, Blast_Score=202, Evalue=3e-52,
Organism=Homo sapiens, GI13514831, Length=350, Percent_Identity=35.1428571428571, Blast_Score=198, Evalue=6e-51,
Organism=Homo sapiens, GI38569503, Length=359, Percent_Identity=33.7047353760446, Blast_Score=195, Evalue=5e-50,
Organism=Homo sapiens, GI38569505, Length=359, Percent_Identity=33.7047353760446, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI256223453, Length=366, Percent_Identity=34.4262295081967, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI164419732, Length=351, Percent_Identity=32.7635327635328, Blast_Score=173, Evalue=2e-43,
Organism=Homo sapiens, GI38327634, Length=359, Percent_Identity=32.3119777158774, Blast_Score=171, Evalue=8e-43,
Organism=Homo sapiens, GI17505907, Length=387, Percent_Identity=31.5245478036176, Blast_Score=160, Evalue=1e-39,
Organism=Homo sapiens, GI9506931, Length=396, Percent_Identity=31.0606060606061, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI6005743, Length=358, Percent_Identity=31.5642458100559, Blast_Score=159, Evalue=3e-39,
Organism=Homo sapiens, GI62241022, Length=345, Percent_Identity=32.1739130434783, Blast_Score=159, Evalue=5e-39,
Organism=Homo sapiens, GI8922886, Length=358, Percent_Identity=31.2849162011173, Blast_Score=158, Evalue=8e-39,
Organism=Homo sapiens, GI4826686, Length=353, Percent_Identity=32.2946175637394, Blast_Score=150, Evalue=2e-36,
Organism=Homo sapiens, GI62241024, Length=323, Percent_Identity=31.8885448916409, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI256773275, Length=369, Percent_Identity=28.7262872628726, Blast_Score=143, Evalue=3e-34,
Organism=Homo sapiens, GI9966805, Length=312, Percent_Identity=33.974358974359, Blast_Score=139, Evalue=6e-33,
Organism=Homo sapiens, GI20336298, Length=180, Percent_Identity=38.3333333333333, Blast_Score=105, Evalue=5e-23,
Organism=Homo sapiens, GI154759257, Length=115, Percent_Identity=33.0434782608696, Blast_Score=85, Evalue=1e-16,
Organism=Escherichia coli, GI1787016, Length=361, Percent_Identity=42.6592797783933, Blast_Score=291, Evalue=6e-80,
Organism=Escherichia coli, GI87082221, Length=363, Percent_Identity=41.0468319559229, Blast_Score=266, Evalue=2e-72,
Organism=Escherichia coli, GI1787605, Length=355, Percent_Identity=38.5915492957746, Blast_Score=243, Evalue=1e-65,
Organism=Escherichia coli, GI1790214, Length=357, Percent_Identity=37.8151260504202, Blast_Score=224, Evalue=5e-60,
Organism=Escherichia coli, GI1788930, Length=351, Percent_Identity=36.1823361823362, Blast_Score=210, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI17510307, Length=348, Percent_Identity=42.2413793103448, Blast_Score=258, Evalue=5e-69,
Organism=Caenorhabditis elegans, GI17510309, Length=348, Percent_Identity=42.2413793103448, Blast_Score=257, Evalue=6e-69,
Organism=Caenorhabditis elegans, GI71995514, Length=348, Percent_Identity=42.2413793103448, Blast_Score=257, Evalue=7e-69,
Organism=Caenorhabditis elegans, GI71995718, Length=369, Percent_Identity=40.9214092140921, Blast_Score=249, Evalue=1e-66,
Organism=Caenorhabditis elegans, GI32565321, Length=383, Percent_Identity=35.7702349869452, Blast_Score=236, Evalue=2e-62,
Organism=Caenorhabditis elegans, GI17552642, Length=354, Percent_Identity=37.8531073446328, Blast_Score=232, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI71987143, Length=352, Percent_Identity=34.0909090909091, Blast_Score=231, Evalue=3e-61,
Organism=Caenorhabditis elegans, GI17507877, Length=366, Percent_Identity=37.7049180327869, Blast_Score=228, Evalue=4e-60,
Organism=Caenorhabditis elegans, GI17507881, Length=366, Percent_Identity=37.7049180327869, Blast_Score=227, Evalue=6e-60,
Organism=Caenorhabditis elegans, GI17510559, Length=379, Percent_Identity=36.4116094986807, Blast_Score=227, Evalue=8e-60,
Organism=Caenorhabditis elegans, GI115533224, Length=334, Percent_Identity=40.4191616766467, Blast_Score=224, Evalue=4e-59,
Organism=Caenorhabditis elegans, GI71995724, Length=360, Percent_Identity=33.3333333333333, Blast_Score=224, Evalue=4e-59,
Organism=Caenorhabditis elegans, GI17555296, Length=351, Percent_Identity=35.6125356125356, Blast_Score=224, Evalue=4e-59,
Organism=Caenorhabditis elegans, GI17507121, Length=360, Percent_Identity=33.0555555555556, Blast_Score=224, Evalue=5e-59,
Organism=Caenorhabditis elegans, GI17552114, Length=358, Percent_Identity=34.0782122905028, Blast_Score=222, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI71982858, Length=368, Percent_Identity=33.9673913043478, Blast_Score=220, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI115532546, Length=369, Percent_Identity=35.7723577235772, Blast_Score=218, Evalue=4e-57,
Organism=Caenorhabditis elegans, GI115532548, Length=367, Percent_Identity=35.9673024523161, Blast_Score=216, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI17507879, Length=366, Percent_Identity=35.792349726776, Blast_Score=209, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI71999646, Length=345, Percent_Identity=33.9130434782609, Blast_Score=207, Evalue=7e-54,
Organism=Caenorhabditis elegans, GI17537549, Length=356, Percent_Identity=35.9550561797753, Blast_Score=207, Evalue=7e-54,
Organism=Caenorhabditis elegans, GI17509811, Length=356, Percent_Identity=35.3932584269663, Blast_Score=206, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI71999644, Length=345, Percent_Identity=33.9130434782609, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI86570094, Length=357, Percent_Identity=33.3333333333333, Blast_Score=204, Evalue=5e-53,
Organism=Caenorhabditis elegans, GI193206561, Length=359, Percent_Identity=33.7047353760446, Blast_Score=197, Evalue=5e-51,
Organism=Caenorhabditis elegans, GI17507945, Length=341, Percent_Identity=34.8973607038123, Blast_Score=196, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI71990816, Length=374, Percent_Identity=31.8181818181818, Blast_Score=167, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI193208216, Length=362, Percent_Identity=33.7016574585635, Blast_Score=166, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI17505370, Length=355, Percent_Identity=32.112676056338, Blast_Score=166, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI17556951, Length=344, Percent_Identity=31.1046511627907, Blast_Score=163, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI17536099, Length=385, Percent_Identity=30.6493506493506, Blast_Score=161, Evalue=6e-40,
Organism=Caenorhabditis elegans, GI17536101, Length=385, Percent_Identity=30.9090909090909, Blast_Score=160, Evalue=9e-40,
Organism=Caenorhabditis elegans, GI17507641, Length=389, Percent_Identity=30.5912596401028, Blast_Score=160, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI17536103, Length=378, Percent_Identity=30.6878306878307, Blast_Score=156, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI32564046, Length=373, Percent_Identity=30.2949061662198, Blast_Score=154, Evalue=7e-38,
Organism=Caenorhabditis elegans, GI17508543, Length=365, Percent_Identity=29.3150684931507, Blast_Score=154, Evalue=7e-38,
Organism=Caenorhabditis elegans, GI17553716, Length=353, Percent_Identity=26.628895184136, Blast_Score=139, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI71982862, Length=205, Percent_Identity=35.1219512195122, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI25148203, Length=393, Percent_Identity=25.9541984732824, Blast_Score=133, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI25148291, Length=344, Percent_Identity=26.7441860465116, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI71997889, Length=357, Percent_Identity=26.3305322128852, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71987152, Length=97, Percent_Identity=41.2371134020619, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI25148205, Length=329, Percent_Identity=23.4042553191489, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17557982, Length=370, Percent_Identity=23.7837837837838, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI32564293, Length=105, Percent_Identity=34.2857142857143, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6321856, Length=363, Percent_Identity=42.1487603305785, Blast_Score=258, Evalue=1e-69,
Organism=Saccharomyces cerevisiae, GI6324778, Length=353, Percent_Identity=40.2266288951841, Blast_Score=251, Evalue=1e-67,
Organism=Saccharomyces cerevisiae, GI6325138, Length=349, Percent_Identity=40.4011461318052, Blast_Score=238, Evalue=8e-64,
Organism=Saccharomyces cerevisiae, GI6321360, Length=354, Percent_Identity=39.5480225988701, Blast_Score=233, Evalue=5e-62,
Organism=Saccharomyces cerevisiae, GI6320041, Length=358, Percent_Identity=36.3128491620112, Blast_Score=228, Evalue=8e-61,
Organism=Saccharomyces cerevisiae, GI6324217, Length=345, Percent_Identity=39.7101449275362, Blast_Score=226, Evalue=3e-60,
Organism=Saccharomyces cerevisiae, GI6320224, Length=364, Percent_Identity=34.8901098901099, Blast_Score=224, Evalue=2e-59,
Organism=Saccharomyces cerevisiae, GI6323021, Length=368, Percent_Identity=36.9565217391304, Blast_Score=212, Evalue=8e-56,
Organism=Saccharomyces cerevisiae, GI6320119, Length=357, Percent_Identity=33.0532212885154, Blast_Score=209, Evalue=5e-55,
Organism=Saccharomyces cerevisiae, GI6322427, Length=364, Percent_Identity=36.2637362637363, Blast_Score=208, Evalue=8e-55,
Organism=Saccharomyces cerevisiae, GI6322912, Length=343, Percent_Identity=34.402332361516, Blast_Score=197, Evalue=2e-51,
Organism=Saccharomyces cerevisiae, GI6322323, Length=343, Percent_Identity=34.402332361516, Blast_Score=197, Evalue=2e-51,
Organism=Saccharomyces cerevisiae, GI6320173, Length=383, Percent_Identity=32.3759791122715, Blast_Score=193, Evalue=3e-50,
Organism=Saccharomyces cerevisiae, GI6321963, Length=379, Percent_Identity=34.5646437994723, Blast_Score=192, Evalue=8e-50,
Organism=Saccharomyces cerevisiae, GI6324620, Length=353, Percent_Identity=33.1444759206799, Blast_Score=190, Evalue=4e-49,
Organism=Saccharomyces cerevisiae, GI6321267, Length=363, Percent_Identity=35.2617079889807, Blast_Score=186, Evalue=6e-48,
Organism=Saccharomyces cerevisiae, GI6320449, Length=370, Percent_Identity=34.5945945945946, Blast_Score=186, Evalue=7e-48,
Organism=Saccharomyces cerevisiae, GI6321111, Length=358, Percent_Identity=31.5642458100559, Blast_Score=181, Evalue=1e-46,
Organism=Saccharomyces cerevisiae, GI6323947, Length=348, Percent_Identity=35.0574712643678, Blast_Score=176, Evalue=7e-45,
Organism=Saccharomyces cerevisiae, GI6319618, Length=432, Percent_Identity=32.4074074074074, Blast_Score=175, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6320400, Length=376, Percent_Identity=32.1808510638298, Blast_Score=164, Evalue=3e-41,
Organism=Saccharomyces cerevisiae, GI6319714, Length=351, Percent_Identity=30.1994301994302, Blast_Score=158, Evalue=1e-39,
Organism=Saccharomyces cerevisiae, GI6323306, Length=454, Percent_Identity=27.0925110132159, Blast_Score=145, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6324366, Length=344, Percent_Identity=29.9418604651163, Blast_Score=130, Evalue=3e-31,
Organism=Saccharomyces cerevisiae, GI6321374, Length=447, Percent_Identity=27.9642058165548, Blast_Score=118, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6322876, Length=210, Percent_Identity=31.4285714285714, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24584399, Length=344, Percent_Identity=39.5348837209302, Blast_Score=239, Evalue=2e-63,
Organism=Drosophila melanogaster, GI24585582, Length=360, Percent_Identity=40, Blast_Score=239, Evalue=2e-63,
Organism=Drosophila melanogaster, GI24584994, Length=384, Percent_Identity=38.5416666666667, Blast_Score=238, Evalue=5e-63,
Organism=Drosophila melanogaster, GI28574962, Length=336, Percent_Identity=39.2857142857143, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI18857967, Length=363, Percent_Identity=36.0881542699724, Blast_Score=232, Evalue=3e-61,
Organism=Drosophila melanogaster, GI21356161, Length=351, Percent_Identity=41.025641025641, Blast_Score=229, Evalue=2e-60,
Organism=Drosophila melanogaster, GI17985987, Length=353, Percent_Identity=39.3767705382436, Blast_Score=229, Evalue=2e-60,
Organism=Drosophila melanogaster, GI24662330, Length=346, Percent_Identity=38.728323699422, Blast_Score=228, Evalue=7e-60,
Organism=Drosophila melanogaster, GI24644479, Length=361, Percent_Identity=37.6731301939058, Blast_Score=225, Evalue=4e-59,
Organism=Drosophila melanogaster, GI24644483, Length=361, Percent_Identity=37.6731301939058, Blast_Score=225, Evalue=4e-59,
Organism=Drosophila melanogaster, GI24642151, Length=358, Percent_Identity=38.268156424581, Blast_Score=224, Evalue=5e-59,
Organism=Drosophila melanogaster, GI281361218, Length=361, Percent_Identity=37.6731301939058, Blast_Score=224, Evalue=5e-59,
Organism=Drosophila melanogaster, GI24644481, Length=361, Percent_Identity=37.6731301939058, Blast_Score=224, Evalue=5e-59,
Organism=Drosophila melanogaster, GI24644487, Length=361, Percent_Identity=37.6731301939058, Blast_Score=224, Evalue=5e-59,
Organism=Drosophila melanogaster, GI45551833, Length=361, Percent_Identity=37.6731301939058, Blast_Score=224, Evalue=5e-59,
Organism=Drosophila melanogaster, GI24644485, Length=361, Percent_Identity=37.6731301939058, Blast_Score=224, Evalue=5e-59,
Organism=Drosophila melanogaster, GI21355075, Length=366, Percent_Identity=37.431693989071, Blast_Score=223, Evalue=1e-58,
Organism=Drosophila melanogaster, GI24645031, Length=360, Percent_Identity=33.6111111111111, Blast_Score=220, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24583281, Length=352, Percent_Identity=35.2272727272727, Blast_Score=218, Evalue=4e-57,
Organism=Drosophila melanogaster, GI24583279, Length=352, Percent_Identity=35.2272727272727, Blast_Score=218, Evalue=5e-57,
Organism=Drosophila melanogaster, GI28575014, Length=350, Percent_Identity=35.4285714285714, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI17977678, Length=340, Percent_Identity=36.4705882352941, Blast_Score=213, Evalue=1e-55,
Organism=Drosophila melanogaster, GI24582080, Length=358, Percent_Identity=34.0782122905028, Blast_Score=211, Evalue=6e-55,
Organism=Drosophila melanogaster, GI24582078, Length=358, Percent_Identity=34.0782122905028, Blast_Score=211, Evalue=6e-55,
Organism=Drosophila melanogaster, GI17136248, Length=358, Percent_Identity=34.0782122905028, Blast_Score=211, Evalue=6e-55,
Organism=Drosophila melanogaster, GI24582075, Length=358, Percent_Identity=34.0782122905028, Blast_Score=211, Evalue=6e-55,
Organism=Drosophila melanogaster, GI24666101, Length=350, Percent_Identity=34.2857142857143, Blast_Score=195, Evalue=4e-50,
Organism=Drosophila melanogaster, GI24581954, Length=361, Percent_Identity=32.9639889196676, Blast_Score=192, Evalue=2e-49,
Organism=Drosophila melanogaster, GI24581952, Length=361, Percent_Identity=32.9639889196676, Blast_Score=192, Evalue=2e-49,
Organism=Drosophila melanogaster, GI24581956, Length=361, Percent_Identity=32.9639889196676, Blast_Score=192, Evalue=2e-49,
Organism=Drosophila melanogaster, GI17136814, Length=340, Percent_Identity=37.0588235294118, Blast_Score=192, Evalue=4e-49,
Organism=Drosophila melanogaster, GI281365720, Length=296, Percent_Identity=37.5, Blast_Score=187, Evalue=7e-48,
Organism=Drosophila melanogaster, GI24642822, Length=382, Percent_Identity=34.0314136125654, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI21355559, Length=365, Percent_Identity=31.5068493150685, Blast_Score=181, Evalue=6e-46,
Organism=Drosophila melanogaster, GI28571808, Length=346, Percent_Identity=34.6820809248555, Blast_Score=180, Evalue=1e-45,
Organism=Drosophila melanogaster, GI28571809, Length=346, Percent_Identity=34.6820809248555, Blast_Score=180, Evalue=1e-45,
Organism=Drosophila melanogaster, GI17647335, Length=375, Percent_Identity=31.2, Blast_Score=167, Evalue=9e-42,
Organism=Drosophila melanogaster, GI20130173, Length=452, Percent_Identity=29.2035398230088, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI24640164, Length=343, Percent_Identity=27.6967930029155, Blast_Score=139, Evalue=4e-33,
Organism=Drosophila melanogaster, GI24643725, Length=387, Percent_Identity=29.1989664082687, Blast_Score=135, Evalue=3e-32,
Organism=Drosophila melanogaster, GI24668515, Length=346, Percent_Identity=28.0346820809249, Blast_Score=132, Evalue=4e-31,
Organism=Drosophila melanogaster, GI19920478, Length=343, Percent_Identity=29.1545189504373, Blast_Score=132, Evalue=4e-31,
Organism=Drosophila melanogaster, GI17136666, Length=412, Percent_Identity=28.6407766990291, Blast_Score=129, Evalue=4e-30,
Organism=Drosophila melanogaster, GI28571338, Length=206, Percent_Identity=37.378640776699, Blast_Score=114, Evalue=7e-26,
Organism=Drosophila melanogaster, GI18859659, Length=206, Percent_Identity=37.378640776699, Blast_Score=114, Evalue=7e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 41016; Mature: 40885

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFSKLSLELQKALEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVE
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHCCCCCCCCCCCCEEEHHHHH
KLQKGKPDVKALVLTPTRELAIQVKEQIYMLTKYKRLSSYVFYGGTSVKQNLDILQNKNV
HHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHCHHHHCCCCE
DILIGTPGRIKDLIDRKALNLSKVEYLVLDEFDQMLDMGFIEDIEYIISFLPKERTTYMF
EEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEE
SATVPSRIELLAKRFLKSDFKFVKVQSVELKPNIEEKMIKLSSPGEKIHELMHIIDTHPM
ECCCCHHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHHEECCCCHHHHHHHHHHHCCCCH
EKMLIFVKTKKDAKDLFFLLTKKGIRAQALHGDLTQRQREKALSAFKSGAVSILIATDVA
HHEEEEEECCCCHHHHHHHHHCCCCEEHHHHCHHHHHHHHHHHHHHHCCCEEEEEEECHH
ARGLDIKDVGVVINYNIPEDPELYIHRIGRTGRIGKSGKAFSLICPEDSKALWRIKKLRS
HCCCCEEEEEEEEECCCCCCCHHHHEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHH
KISV
HCCC
>Mature Secondary Structure 
SLFSKLSLELQKALEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVE
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHCCCCCCCCCCCCEEEHHHHH
KLQKGKPDVKALVLTPTRELAIQVKEQIYMLTKYKRLSSYVFYGGTSVKQNLDILQNKNV
HHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHCHHHHCCCCE
DILIGTPGRIKDLIDRKALNLSKVEYLVLDEFDQMLDMGFIEDIEYIISFLPKERTTYMF
EEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEE
SATVPSRIELLAKRFLKSDFKFVKVQSVELKPNIEEKMIKLSSPGEKIHELMHIIDTHPM
ECCCCHHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHHEECCCCHHHHHHHHHHHCCCCH
EKMLIFVKTKKDAKDLFFLLTKKGIRAQALHGDLTQRQREKALSAFKSGAVSILIATDVA
HHEEEEEECCCCHHHHHHHHHCCCCEEHHHHCHHHHHHHHHHHHHHHCCCEEEEEEECHH
ARGLDIKDVGVVINYNIPEDPELYIHRIGRTGRIGKSGKAFSLICPEDSKALWRIKKLRS
HCCCCEEEEEEEEECCCCCCCHHHHEECCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHH
KISV
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA