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The map label for this gene is flhD [H]

Identifier: 194737939

GI number: 194737939

Start: 1999604

End: 1999945

Strand: Reverse

Name: flhD [H]

Synonym: SeSA_A2081

Alternate gene names: 194737939

Gene position: 1999945-1999604 (Counterclockwise)

Preceding gene: 194736914

Following gene: 194737288

Centisome position: 42.47

GC content: 47.95

Gene sequence:

>342_bases
ATGCATACATCCGAGTTGCTAAAACACATTTATGACATCAATTTGTCATATTTACTCCTTGCACAGCGTTTGATCGTCCA
GGACAAAGCATCTGCGATGTTCCGCCTCGGTATCAACGAAGAGATGGCAAACACACTGGGCGCGTTGACCTTGCCGCAGA
TGGTCAAACTGGCGGAGACGAACCAGTTAGTTTGTCATTTCCGGTTTGACGATCATCAGACGATCACCCGTTTGACTCAG
GATTCGCGCGTCGATGATTTACAGCAGATTCACACAGGTATCATGCTTTCAACGCGTCTGCTCAATGAAGTGGACGATAC
GGCGCGTAAGAAAAGGGCATGA

Upstream 100 bases:

>100_bases
GCATTTGACCTTTTTGCTTCTTTTACCGGGCCTTCCCGGCGACATCACGGGGTGCGGCTACGTCGCACAAAAATAAAGTT
GGTTATTCTGGATGGGAACA

Downstream 100 bases:

>100_bases
TAATGAGTGAAAAAAGCATTGTTCAGGAAGCTCGCGATATCCAGTTGGCGATGGAGTTGATTAATCTTGGCGCTCGTCTA
CAAATGCTGGAAAGCGAAAC

Product: transcriptional activator FlhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MHTSELLKHIYDINLSYLLLAQRLIVQDKASAMFRLGINEEMANTLGALTLPQMVKLAETNQLVCHFRFDDHQTITRLTQ
DSRVDDLQQIHTGIMLSTRLLNEVDDTARKKRA

Sequences:

>Translated_113_residues
MHTSELLKHIYDINLSYLLLAQRLIVQDKASAMFRLGINEEMANTLGALTLPQMVKLAETNQLVCHFRFDDHQTITRLTQ
DSRVDDLQQIHTGIMLSTRLLNEVDDTARKKRA
>Mature_113_residues
MHTSELLKHIYDINLSYLLLAQRLIVQDKASAMFRLGINEEMANTLGALTLPQMVKLAETNQLVCHFRFDDHQTITRLTQ
DSRVDDLQQIHTGIMLSTRLLNEVDDTARKKRA

Specific function: Transcriptional activator. Involved in the regulation of a number of genetic systems. Together with FlhC it acts as an activator of class 2 flagellar genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FlhD family [H]

Homologues:

Organism=Escherichia coli, GI145693151, Length=116, Percent_Identity=89.6551724137931, Blast_Score=208, Evalue=7e-56,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007911
- ProDom:   PD015582 [H]

Pfam domain/function: PF05247 FlhD [H]

EC number: NA

Molecular weight: Translated: 13006; Mature: 13006

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTSELLKHIYDINLSYLLLAQRLIVQDKASAMFRLGINEEMANTLGALTLPQMVKLAET
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
NQLVCHFRFDDHQTITRLTQDSRVDDLQQIHTGIMLSTRLLNEVDDTARKKRA
CCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHTSELLKHIYDINLSYLLLAQRLIVQDKASAMFRLGINEEMANTLGALTLPQMVKLAET
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
NQLVCHFRFDDHQTITRLTQDSRVDDLQQIHTGIMLSTRLLNEVDDTARKKRA
CCEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA