Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
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Accession | NC_011094 |
Length | 4,709,075 |
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The map label for this gene is purT [H]
Identifier: 194736750
GI number: 194736750
Start: 1954227
End: 1955405
Strand: Direct
Name: purT [H]
Synonym: SeSA_A2037
Alternate gene names: 194736750
Gene position: 1954227-1955405 (Clockwise)
Preceding gene: 194735808
Following gene: 194736565
Centisome position: 41.5
GC content: 56.91
Gene sequence:
>1179_bases ATGACGCTATTAGGCACTGCGCTGCGTCCGGCAGCAACGCGGGTGATGTTATTAGGGGCAGGTGAATTGGGAAAAGAGGT GGCGATTGAATGCCAACGCCTGGGGATCGAGGTTATCGCCGTCGATCGCTATCCTGATGCGCCTGCCATGCATGTGGCTC ACCGTTCACACGTCATTAATATGCTGGACAGCGAGGCGCTACGTCATGTGATAACAGAGGAAAAACCGCATTATATCGTG CCGGAAATAGAAGCGATCGCCACGGATACGCTGCGCGAGCTGGAGGGCGAAGGACTGAATGTCGTGCCTTGCGCCCGTGC AACGCAGCTCACGATGAACCGCGAAGGGATCCGTCGCCTGGCCGCAGAAGAATTAGGTCTGCCGACATCGACGTATCGCT TTGCCGACAGTGAGGCCAGTTTTCATGATGCGGTAGCCGCAGTGGGTTTTCCTTGCATCGTCAAACCGGTCATGAGCTCT TCCGGCAAAGGCCAGAGCTTTATCCGCTCGGCCGAACAGCTCGCGCAGGCATGGGAGTATGCTCAACAAGGCGGACGCGC TGGCGCGGGTCGCGTGATTGTGGAAGGCGTGGTTAAATTTGATTTTGAAATTACGCTGCTCACCGTTAGCGCCGTCGATG GCGTGCATTTCTGCGCGCCGGTCGGTCATCGTCAGCAAGATGGCGACTATCGCGAATCCTGGCAGCCACAGCAAATGAGC GAACTGGCGCTGAAGCGGGCGCAAGAGATTGCCCGCCATGTGGTACTGGCGTTAGGCGGTCATGGACTGTTCGGCGTTGA ACTCTTCGTCTGTGGCGATGAAGTCATTTTCAGCGAAGTCTCCCCTCGCCCGCACGATACCGGAATGGTCACGTTGATTT CTCAGGATCTTTCTGAGTTTGCGCTGCATGTGCGCGCCTTTCTGGGAATGCCCGTAGGCGCTATTCGCCAGTATGGTCCC GCTGCCTCGGCCGTGATTCTGCCGCAGCTTACCAGTCAAAATGTGACGTTTGATAATGTTCACGCGGCGGTAGGGGCCGG AGTGCAGGTACGGCTGTTTGGTAAGCCTGAGATCGACGGCACCCGTCGTCTTGGTGTAGCGTTAGCGACAGGTGAAAACG TTGAAGAAGCGGTGATAAGAGCGAAAAAGGCCGCCAGCCGCGTGACGGTAAAAGGCTAA
Upstream 100 bases:
>100_bases TACAGTATATTGCAAGGCAGCAAGAAAAGCAATCTATTCGAAAAGACATACGCAAACGTTTTCGTATATACTGCGCGCAG GTAAATAAGGGGACAGAAAT
Downstream 100 bases:
>100_bases TGCGCCATCGCCTGATGGCGACGTTAGCGCATTTTTATCAAACCTGCCTGATCGCCACTCGTAAGCCCGATAAGCAAGCG CCATCGGGCATTTAACGGCT
Product: phosphoribosylglycinamide formyltransferase 2
Products: 5'-Phosphoribosyl-N-Formylglycinamide; Pyrophosphate; acetylphosphate; ADP [C]
Alternate protein names: GART 2; 5'-phosphoribosylglycinamide transformylase 2; Formate-dependent GAR transformylase; GAR transformylase 2 [H]
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MTLLGTALRPAATRVMLLGAGELGKEVAIECQRLGIEVIAVDRYPDAPAMHVAHRSHVINMLDSEALRHVITEEKPHYIV PEIEAIATDTLRELEGEGLNVVPCARATQLTMNREGIRRLAAEELGLPTSTYRFADSEASFHDAVAAVGFPCIVKPVMSS SGKGQSFIRSAEQLAQAWEYAQQGGRAGAGRVIVEGVVKFDFEITLLTVSAVDGVHFCAPVGHRQQDGDYRESWQPQQMS ELALKRAQEIARHVVLALGGHGLFGVELFVCGDEVIFSEVSPRPHDTGMVTLISQDLSEFALHVRAFLGMPVGAIRQYGP AASAVILPQLTSQNVTFDNVHAAVGAGVQVRLFGKPEIDGTRRLGVALATGENVEEAVIRAKKAASRVTVKG
Sequences:
>Translated_392_residues MTLLGTALRPAATRVMLLGAGELGKEVAIECQRLGIEVIAVDRYPDAPAMHVAHRSHVINMLDSEALRHVITEEKPHYIV PEIEAIATDTLRELEGEGLNVVPCARATQLTMNREGIRRLAAEELGLPTSTYRFADSEASFHDAVAAVGFPCIVKPVMSS SGKGQSFIRSAEQLAQAWEYAQQGGRAGAGRVIVEGVVKFDFEITLLTVSAVDGVHFCAPVGHRQQDGDYRESWQPQQMS ELALKRAQEIARHVVLALGGHGLFGVELFVCGDEVIFSEVSPRPHDTGMVTLISQDLSEFALHVRAFLGMPVGAIRQYGP AASAVILPQLTSQNVTFDNVHAAVGAGVQVRLFGKPEIDGTRRLGVALATGENVEEAVIRAKKAASRVTVKG >Mature_391_residues TLLGTALRPAATRVMLLGAGELGKEVAIECQRLGIEVIAVDRYPDAPAMHVAHRSHVINMLDSEALRHVITEEKPHYIVP EIEAIATDTLRELEGEGLNVVPCARATQLTMNREGIRRLAAEELGLPTSTYRFADSEASFHDAVAAVGFPCIVKPVMSSS GKGQSFIRSAEQLAQAWEYAQQGGRAGAGRVIVEGVVKFDFEITLLTVSAVDGVHFCAPVGHRQQDGDYRESWQPQQMSE LALKRAQEIARHVVLALGGHGLFGVELFVCGDEVIFSEVSPRPHDTGMVTLISQDLSEFALHVRAFLGMPVGAIRQYGPA ASAVILPQLTSQNVTFDNVHAAVGAGVQVRLFGKPEIDGTRRLGVALATGENVEEAVIRAKKAASRVTVKG
Specific function: Catalyzes two reactions:the first one is the production of beta-formyl glycinamide ribonucleotide (GAR) from formate, ATP and beta GAR; the second, a side reaction, is the production of acetyl phosphate and ADP from acetate and ATP [H]
COG id: COG0027
COG function: function code F; Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1788155, Length=392, Percent_Identity=87.7551020408163, Blast_Score=704, Evalue=0.0, Organism=Escherichia coli, GI1786733, Length=357, Percent_Identity=23.8095238095238, Blast_Score=65, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6324702, Length=304, Percent_Identity=24.0131578947368, Blast_Score=94, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR003135 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR005862 [H]
Pfam domain/function: PF02222 ATP-grasp [H]
EC number: 2.1.2.- [C]
Molecular weight: Translated: 42182; Mature: 42051
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLGTALRPAATRVMLLGAGELGKEVAIECQRLGIEVIAVDRYPDAPAMHVAHRSHVIN CCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHH MLDSEALRHVITEEKPHYIVPEIEAIATDTLRELEGEGLNVVPCARATQLTMNREGIRRL HHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHCCHHHHHHH AAEELGLPTSTYRFADSEASFHDAVAAVGFPCIVKPVMSSSGKGQSFIRSAEQLAQAWEY HHHHHCCCCCCEEECCCCCHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH AQQGGRAGAGRVIVEGVVKFDFEITLLTVSAVDGVHFCAPVGHRQQDGDYRESWQPQQMS HHHCCCCCCCHHHEEEEHEEEEEEEEEEEECCCCCCEECCCCCCCCCCCHHHCCCHHHHH ELALKRAQEIARHVVLALGGHGLFGVELFVCGDEVIFSEVSPRPHDTGMVTLISQDLSEF HHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCHHHHHCCCCCCCCCCEEEEHHHHHHHH ALHVRAFLGMPVGAIRQYGPAASAVILPQLTSQNVTFDNVHAAVGAGVQVRLFGKPEIDG HHHHHHHHCCCHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHCCCEEEEEECCCCCCC TRRLGVALATGENVEEAVIRAKKAASRVTVKG CCEEEEEEECCCCHHHHHHHHHHHHCCEECCC >Mature Secondary Structure TLLGTALRPAATRVMLLGAGELGKEVAIECQRLGIEVIAVDRYPDAPAMHVAHRSHVIN CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHH MLDSEALRHVITEEKPHYIVPEIEAIATDTLRELEGEGLNVVPCARATQLTMNREGIRRL HHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHCCHHHHHHH AAEELGLPTSTYRFADSEASFHDAVAAVGFPCIVKPVMSSSGKGQSFIRSAEQLAQAWEY HHHHHCCCCCCEEECCCCCHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH AQQGGRAGAGRVIVEGVVKFDFEITLLTVSAVDGVHFCAPVGHRQQDGDYRESWQPQQMS HHHCCCCCCCHHHEEEEHEEEEEEEEEEEECCCCCCEECCCCCCCCCCCHHHCCCHHHHH ELALKRAQEIARHVVLALGGHGLFGVELFVCGDEVIFSEVSPRPHDTGMVTLISQDLSEF HHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCHHHHHCCCCCCCCCCEEEEHHHHHHHH ALHVRAFLGMPVGAIRQYGPAASAVILPQLTSQNVTFDNVHAAVGAGVQVRLFGKPEIDG HHHHHHHHCCCHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHCCCEEEEEECCCCCCC TRRLGVALATGENVEEAVIRAKKAASRVTVKG CCEEEEEEECCCCHHHHHHHHHHHHCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Formate; 5'-Phospho-Ribosylglycinamide; acetate; ATP [C]
Specific reaction: Formate + ATP + 5'-Phospho-Ribosylglycinamide = 5'-Phosphoribosyl-N-Formylglycinamide + ADP + Pyrophosphate. acetate + ATP = acetylphosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA