| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is 194734884
Identifier: 194734884
GI number: 194734884
Start: 1591641
End: 1592129
Strand: Direct
Name: 194734884
Synonym: SeSA_A1651
Alternate gene names: NA
Gene position: 1591641-1592129 (Clockwise)
Preceding gene: 194736884
Following gene: 194737330
Centisome position: 33.8
GC content: 48.26
Gene sequence:
>489_bases ATGTCAGAAAATAAAAATGTGCAAGATACACATATTTCCGAGCAAATGAAGGCGCTTCACGGTGCGTTGATTCGCGTGGT GAGCGCGCTTAACCGGCCTCGTAATGATGAGAAATTAATTGCAGAGGCGGGGATTCAACTCGATCGTGCGCTATTTTCGA TCCTTATTAGTATCGAACGTTTAGGGCCGATTGGCGTTGTTGAGTTAGCCGAACGTGCCGGTCGTGATTATACGACGGTA AGCCGACAGGTCGCCAAACTGGAGAAGTTGGGGTTGATAATACGGCAGCATAATGCCATCGATCGTCGTATACGCGAGGC CGTTATTTCCCGGACAGGAAAGGCGATGACGGAGCGTATAGACGCTGCGCGAGAGCAAATGGGCAAAGTTGTTTTTAAAG ACTGGCCTCAGGATGAACTTGATGTCTTTGTTCGGTTAATGCAAAAGTTTGCCGATGCAATGGATAGCGATGCTCCAATG CCGGAATAA
Upstream 100 bases:
>100_bases AGCCCGGTTACGCCAGCGCCGCAGATCAGTACATCTGTAGTGGTGTATCTTGTCATCGTCTCTCCGATATGTGTATTATG CACATAAGAGGAGACATGCT
Downstream 100 bases:
>100_bases GCAAAAGAAAAGGGCGGTCAAATCCGATCGTCCAGGTTAATATCGGTATCTGACATTGATTAAATAGCCAGCAAAGTAAA TATAACAACAACATTTATCG
Product: transcriptional regulator, MarR family protein
Products: NA
Alternate protein names: Transcriptional Regulator; Regulatory Protein; Transcriptional Repressor MprA; Regulatory Protein MarR; Transcriptional Regulator Protein; Transcriptional Regulator MarR Family; Transcriptional Regulator Marr Family
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MSENKNVQDTHISEQMKALHGALIRVVSALNRPRNDEKLIAEAGIQLDRALFSILISIERLGPIGVVELAERAGRDYTTV SRQVAKLEKLGLIIRQHNAIDRRIREAVISRTGKAMTERIDAAREQMGKVVFKDWPQDELDVFVRLMQKFADAMDSDAPM PE
Sequences:
>Translated_162_residues MSENKNVQDTHISEQMKALHGALIRVVSALNRPRNDEKLIAEAGIQLDRALFSILISIERLGPIGVVELAERAGRDYTTV SRQVAKLEKLGLIIRQHNAIDRRIREAVISRTGKAMTERIDAAREQMGKVVFKDWPQDELDVFVRLMQKFADAMDSDAPM PE >Mature_161_residues SENKNVQDTHISEQMKALHGALIRVVSALNRPRNDEKLIAEAGIQLDRALFSILISIERLGPIGVVELAERAGRDYTTVS RQVAKLEKLGLIIRQHNAIDRRIREAVISRTGKAMTERIDAAREQMGKVVFKDWPQDELDVFVRLMQKFADAMDSDAPMP E
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18304; Mature: 18173
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENKNVQDTHISEQMKALHGALIRVVSALNRPRNDEKLIAEAGIQLDRALFSILISIER CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LGPIGVVELAERAGRDYTTVSRQVAKLEKLGLIIRQHNAIDRRIREAVISRTGKAMTERI CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAAREQMGKVVFKDWPQDELDVFVRLMQKFADAMDSDAPMPE HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SENKNVQDTHISEQMKALHGALIRVVSALNRPRNDEKLIAEAGIQLDRALFSILISIER CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LGPIGVVELAERAGRDYTTVSRQVAKLEKLGLIIRQHNAIDRRIREAVISRTGKAMTERI CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DAAREQMGKVVFKDWPQDELDVFVRLMQKFADAMDSDAPMPE HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA