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The map label for this gene is ycbK [H]

Identifier: 194734847

GI number: 194734847

Start: 1095634

End: 1096182

Strand: Direct

Name: ycbK [H]

Synonym: SeSA_A1111

Alternate gene names: 194734847

Gene position: 1095634-1096182 (Clockwise)

Preceding gene: 194734245

Following gene: 194737484

Centisome position: 23.27

GC content: 51.73

Gene sequence:

>549_bases
ATGGACAAATTTGACGCTAATCGCCGCAAGCTGCTGGCGCTTGGTGGTGTCGCTCTCGGCGCCGCCATCCTGCCCGCGCC
AGCGTTTGCCACACTCTCGACCCCACGCCCGCGCATTTTGACGTTAAACAATCTCCATACCGGAGAGTCAATCAAGGCGG
AGTTTTTCGATGGAAGAGCCTATATTCAGGATGAATTAGCAAAGTTAAACCATTTTTTCCGTGACTATCGCGCGAATAAA
GTCCGATCAATCGATCCCCGCCTGTTTGACCAACTTTACCGACTTCAGGGGCTGTTAGGGACGCGTAAACCTGTGCAGCT
CATCTCAGGCTACCGTTCTCTTGATACCAATAATGAATTACGCGCCCGTAGCAGCGGCGTAGCGAAAAAAAGCTACCATA
CAAAAGGGCAGGCGATGGATTTTCATATTGAAGGCGTGGCGCTGAGCAATATTCGCAAAGCGGCGTTATCTATGCGCGCA
GGTGGTGTAGGATATTACCCACGTAGTAACTTTGTGCATATTGATACCGGGCCGGCGCGGCACTGGTAA

Upstream 100 bases:

>100_bases
AAGTCGACCGGGCCGTTCAGAAGTCTGTGCCAGCCGGTATCATGTCTGCTTAAAGGTAGAAGTGTATTAACGATAACATT
GACCTGTAGACCTGATTATC

Downstream 100 bases:

>100_bases
TCAGCGAGGCTTAATCAAAGGAGCAGTATGAACTATCGTATTATTCCGGTCACCGCGTTCTCCCAGAACTGTTCATTAAT
CTGGTGCGAACAAACCCGGC

Product: Tat (twin-arginine translocation) pathway signal sequence domain/peptidase M15 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MDKFDANRRKLLALGGVALGAAILPAPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRAYIQDELAKLNHFFRDYRANK
VRSIDPRLFDQLYRLQGLLGTRKPVQLISGYRSLDTNNELRARSSGVAKKSYHTKGQAMDFHIEGVALSNIRKAALSMRA
GGVGYYPRSNFVHIDTGPARHW

Sequences:

>Translated_182_residues
MDKFDANRRKLLALGGVALGAAILPAPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRAYIQDELAKLNHFFRDYRANK
VRSIDPRLFDQLYRLQGLLGTRKPVQLISGYRSLDTNNELRARSSGVAKKSYHTKGQAMDFHIEGVALSNIRKAALSMRA
GGVGYYPRSNFVHIDTGPARHW
>Mature_182_residues
MDKFDANRRKLLALGGVALGAAILPAPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRAYIQDELAKLNHFFRDYRANK
VRSIDPRLFDQLYRLQGLLGTRKPVQLISGYRSLDTNNELRARSSGVAKKSYHTKGQAMDFHIEGVALSNIRKAALSMRA
GGVGYYPRSNFVHIDTGPARHW

Specific function: Unknown

COG id: COG3108

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1666 [H]

Homologues:

Organism=Escherichia coli, GI1787157, Length=182, Percent_Identity=95.0549450549451, Blast_Score=360, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010275
- InterPro:   IPR009045
- InterPro:   IPR006311 [H]

Pfam domain/function: PF05951 Peptidase_M15_2 [H]

EC number: NA

Molecular weight: Translated: 20355; Mature: 20355

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKFDANRRKLLALGGVALGAAILPAPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRA
CCCCCCCCCEEEEECCHHHHHHHHCCCCEEECCCCCCEEEEECCCCCCCCCEEEEECCHH
YIQDELAKLNHFFRDYRANKVRSIDPRLFDQLYRLQGLLGTRKPVQLISGYRSLDTNNEL
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCH
RARSSGVAKKSYHTKGQAMDFHIEGVALSNIRKAALSMRAGGVGYYPRSNFVHIDTGPAR
HHHHCCCCHHHCCCCCCEEEEEECCEEHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCC
HW
CC
>Mature Secondary Structure
MDKFDANRRKLLALGGVALGAAILPAPAFATLSTPRPRILTLNNLHTGESIKAEFFDGRA
CCCCCCCCCEEEEECCHHHHHHHHCCCCEEECCCCCCEEEEECCCCCCCCCEEEEECCHH
YIQDELAKLNHFFRDYRANKVRSIDPRLFDQLYRLQGLLGTRKPVQLISGYRSLDTNNEL
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCH
RARSSGVAKKSYHTKGQAMDFHIEGVALSNIRKAALSMRAGGVGYYPRSNFVHIDTGPAR
HHHHCCCCHHHCCCCCCEEEEEECCEEHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCC
HW
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]