Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
---|---|
Accession | NC_011059 |
Length | 2,512,923 |
Click here to switch to the map view.
The map label for this gene is 194334650
Identifier: 194334650
GI number: 194334650
Start: 2022967
End: 2024220
Strand: Reverse
Name: 194334650
Synonym: Paes_1851
Alternate gene names: NA
Gene position: 2024220-2022967 (Counterclockwise)
Preceding gene: 194334651
Following gene: 194334649
Centisome position: 80.55
GC content: 52.39
Gene sequence:
>1254_bases ATGCAGATAGTCATATTTGAAGACGAGACCGCATACTCGCTCACTCCGCTATCAGATCTCAAGCCTGTCGTCGCTCTTTG CACCGGAGCAGGTTCGCTGCTTGATAAATTGCTGTTTCACACTGCCGGTTATTCTCATCCGCTCTTTCATGTCAGGAGCT ACCTTCGTCCTTTCTACCGGAACCGTCTCTCTCTTTTTGAACAAGCCTCTTCACCGGACCAGGATCTTCTTCTGATAAAC GGGCGTCTTTTGTTCAGTGCTGAAGCGGCACGACTCTGCATGGAAACCCCTCTTTCGCCGGGCAGCTCTGTGCTGCAGGG TGGAGATCTGATCGTCAGTCGCGTCGCTGCCGGCGTTGTTACCAGACAGGACGGCACGTTGCCGGACTGCATCGATACGG CTGAAATTTGCAGCAAAACTGCGGTTTCAGAGGTGTCCGGGTTTTCGCTGATCACGCGACTCTGGGATGTTATCGATTTT CACGAAAAACAGCTGCAGCGCGATGCCGGGATGTTTCCCCTTGGACGTATCGACGGGTGTATAGAAGAGGGCGCCCATCT GATCAACAGGGAGAGGATCTCAGTGGCCAGGGGAGCTGTTGTTCGGCCTGGAGCGGTCATTGATGCCTCCGAGGGTTTTG TTGCCCTTGGTTGCGGGGCTGTAGTCGAGCCCCAGGCGGTTGTGGCGGCAAATGTTGTAATCGGAGATGGTGCCAGGGTG AAAATGGGCGCGCGAATCTACAATAATGTCTCGATTGGATGTTCATCGAAAGCCGGCGGTGAGATAGAGGATTCCATAAT GGAATCGTATGCCAACAAGCAGCACGATGGATTTCTGGGTCATTCATATATCTCTTCATGGTGTAACCTCGGTGCTGGGA CCAATACGTCGGATCTGCGTAATGACTACAAAAAGGTGAAATTGCATATTGACGGATCCGAAACGGATACGGGTATGCAG TTTCTCGGGCTTCTGATGGGGGAACACTCCAAGGCAGCCATCAATACGATGTTCAATACAGGAACAATCGTTGGAACATC GAGCAATGTTTTCGGCGCGGGATTTCCTCCGAAATCGATTCCTTCATTTGCCTGGGGCGGCGGGGCATCGGGGGTGGTGC CCTACGATATAGACAGAGCGGTAGAAACTGCCCGGGTTGTTATGGGGCGGAGAAACATCGGTATGGACGATCTGTATGAA ACCATGTTTCGATTTGTCGCTTCGCGATCCCTTGGTGAGAGGGTATCTCTTTAA
Upstream 100 bases:
>100_bases TGCCCTGAACCTTCTTGGATATCAGGGAGTTCGTTAAGAGTAGATTCTTCAACGCCTATTGCTCTGTTTATCCTGTTTCC TGTCATTCGTCACTGAAGCC
Downstream 100 bases:
>100_bases GTATTATTTATCTCAATTAATAGATCGAGTATGGTCATTGTTATCGATAATTACGACTCTTTTACCTATAACCTTGTTCA ATACCTGGGCGAACTTGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Glucose-1-Phosphate Thymidylyltransferase; Sugar Phospate Transferase; Sugar-Phosphate Nucleotydyltransferase; Sugar Phosphate Nucleotydyl Transferase; Nucleoside-Diphosphate-Sugar Pyrophosphorylase; Transferase Hexapeptide Repeat Containing Protein; Transferase Hexapeptide Repeat; Sugar-1-Phosphate Nucleotidylyltransferase; Glucosamine-1-Phosphate N-Acetyltransferase; N-Acetylglucosamine-1-Phosphate Uridyltransferase; UDP-GlcNAc Pyrophosphorylase; Sugar-1-Phosphate Guanyl Transferase; Hexapeptide Transferase Family Protein; UDP-N-Acetylglucosamine Pyrophosphorylase GlmU-Related; Bifunctional GlmU Protein; Bacterial Transferase Hexapeptide Repeat Protein; Hexapeptide Repeat-Containing Protein; Translation Initiation Factor EIF2B Subunit
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MQIVIFEDETAYSLTPLSDLKPVVALCTGAGSLLDKLLFHTAGYSHPLFHVRSYLRPFYRNRLSLFEQASSPDQDLLLIN GRLLFSAEAARLCMETPLSPGSSVLQGGDLIVSRVAAGVVTRQDGTLPDCIDTAEICSKTAVSEVSGFSLITRLWDVIDF HEKQLQRDAGMFPLGRIDGCIEEGAHLINRERISVARGAVVRPGAVIDASEGFVALGCGAVVEPQAVVAANVVIGDGARV KMGARIYNNVSIGCSSKAGGEIEDSIMESYANKQHDGFLGHSYISSWCNLGAGTNTSDLRNDYKKVKLHIDGSETDTGMQ FLGLLMGEHSKAAINTMFNTGTIVGTSSNVFGAGFPPKSIPSFAWGGGASGVVPYDIDRAVETARVVMGRRNIGMDDLYE TMFRFVASRSLGERVSL
Sequences:
>Translated_417_residues MQIVIFEDETAYSLTPLSDLKPVVALCTGAGSLLDKLLFHTAGYSHPLFHVRSYLRPFYRNRLSLFEQASSPDQDLLLIN GRLLFSAEAARLCMETPLSPGSSVLQGGDLIVSRVAAGVVTRQDGTLPDCIDTAEICSKTAVSEVSGFSLITRLWDVIDF HEKQLQRDAGMFPLGRIDGCIEEGAHLINRERISVARGAVVRPGAVIDASEGFVALGCGAVVEPQAVVAANVVIGDGARV KMGARIYNNVSIGCSSKAGGEIEDSIMESYANKQHDGFLGHSYISSWCNLGAGTNTSDLRNDYKKVKLHIDGSETDTGMQ FLGLLMGEHSKAAINTMFNTGTIVGTSSNVFGAGFPPKSIPSFAWGGGASGVVPYDIDRAVETARVVMGRRNIGMDDLYE TMFRFVASRSLGERVSL >Mature_417_residues MQIVIFEDETAYSLTPLSDLKPVVALCTGAGSLLDKLLFHTAGYSHPLFHVRSYLRPFYRNRLSLFEQASSPDQDLLLIN GRLLFSAEAARLCMETPLSPGSSVLQGGDLIVSRVAAGVVTRQDGTLPDCIDTAEICSKTAVSEVSGFSLITRLWDVIDF HEKQLQRDAGMFPLGRIDGCIEEGAHLINRERISVARGAVVRPGAVIDASEGFVALGCGAVVEPQAVVAANVVIGDGARV KMGARIYNNVSIGCSSKAGGEIEDSIMESYANKQHDGFLGHSYISSWCNLGAGTNTSDLRNDYKKVKLHIDGSETDTGMQ FLGLLMGEHSKAAINTMFNTGTIVGTSSNVFGAGFPPKSIPSFAWGGGASGVVPYDIDRAVETARVVMGRRNIGMDDLYE TMFRFVASRSLGERVSL
Specific function: Unknown
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44726; Mature: 44726
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIVIFEDETAYSLTPLSDLKPVVALCTGAGSLLDKLLFHTAGYSHPLFHVRSYLRPFYR CEEEEEECCCCEEECCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH NRLSLFEQASSPDQDLLLINGRLLFSAEAARLCMETPLSPGSSVLQGGDLIVSRVAAGVV HHHHHHHHCCCCCCCEEEECCEEEEEHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHE TRQDGTLPDCIDTAEICSKTAVSEVSGFSLITRLWDVIDFHEKQLQRDAGMFPLGRIDGC ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH IEEGAHLINRERISVARGAVVRPGAVIDASEGFVALGCGAVVEPQAVVAANVVIGDGARV HHHHHHHHHHHHHHHHCCCEECCCCEEECCCCEEEECCCCCCCCCCEEEEEEEECCCCEE KMGARIYNNVSIGCSSKAGGEIEDSIMESYANKQHDGFLGHSYISSWCNLGAGTNTSDLR EECCEEECCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHH NDYKKVKLHIDGSETDTGMQFLGLLMGEHSKAAINTMFNTGTIVGTSSNVFGAGFPPKSI CCCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCC PSFAWGGGASGVVPYDIDRAVETARVVMGRRNIGMDDLYETMFRFVASRSLGERVSL CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure MQIVIFEDETAYSLTPLSDLKPVVALCTGAGSLLDKLLFHTAGYSHPLFHVRSYLRPFYR CEEEEEECCCCEEECCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH NRLSLFEQASSPDQDLLLINGRLLFSAEAARLCMETPLSPGSSVLQGGDLIVSRVAAGVV HHHHHHHHCCCCCCCEEEECCEEEEEHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHE TRQDGTLPDCIDTAEICSKTAVSEVSGFSLITRLWDVIDFHEKQLQRDAGMFPLGRIDGC ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH IEEGAHLINRERISVARGAVVRPGAVIDASEGFVALGCGAVVEPQAVVAANVVIGDGARV HHHHHHHHHHHHHHHHCCCEECCCCEEECCCCEEEECCCCCCCCCCEEEEEEEECCCCEE KMGARIYNNVSIGCSSKAGGEIEDSIMESYANKQHDGFLGHSYISSWCNLGAGTNTSDLR EECCEEECCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHH NDYKKVKLHIDGSETDTGMQFLGLLMGEHSKAAINTMFNTGTIVGTSSNVFGAGFPPKSI CCCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCC PSFAWGGGASGVVPYDIDRAVETARVVMGRRNIGMDDLYETMFRFVASRSLGERVSL CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA