Definition Prosthecochloris aestuarii DSM 271 chromosome, complete genome.
Accession NC_011059
Length 2,512,923

Click here to switch to the map view.

The map label for this gene is 194333252

Identifier: 194333252

GI number: 194333252

Start: 444724

End: 445083

Strand: Reverse

Name: 194333252

Synonym: Paes_0408

Alternate gene names: NA

Gene position: 445083-444724 (Counterclockwise)

Preceding gene: 194333253

Following gene: 194333251

Centisome position: 17.71

GC content: 46.94

Gene sequence:

>360_bases
ATGATGCAGAAAAGGGATAAGCGCATAGACGATCAAGTCCGGACAACACTTGAAATACTGGATAATCTTCCTCAACTGGA
AGCACACCATCTCTTCAGGGTCCACCTGATGAACAGGATTGAACAAAACAGCCCAGGCATGCTTCATATGCCCTACATGG
CAGGGTATGGCCTTAAAATGGCGCTTATGGCCCTCCTTGTAGTCATCAATATCGGCACGGCATTTCTGTTCATGCAGTCT
GGTAACGACTCTGCCATGATCTCTGAAAACGATATGCTTGAGCGCCTGAATAATGAGTACAGCAGTCCTGCGCTCTCCTA
TTATCTTGATGAAACTCAGGAAGATGCAGCGCTGGAATAG

Upstream 100 bases:

>100_bases
TGAAAAACACTACTCCGCAGAAAAGGCATAATCCACAGAGTGCGCAAGGTTTTCGGCTGACAAGCGTCAAAACTGTTACG
ATCAACAAAAACATAGCATT

Downstream 100 bases:

>100_bases
CAAGAACGATGTATGACTCTATGAAAGGAACAAAAATGATTTTGGCTCCTCAACGCGAAAAGATGAAGATGAACTGATGA
ATGGCCCTGCAATGGAACTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MMQKRDKRIDDQVRTTLEILDNLPQLEAHHLFRVHLMNRIEQNSPGMLHMPYMAGYGLKMALMALLVVINIGTAFLFMQS
GNDSAMISENDMLERLNNEYSSPALSYYLDETQEDAALE

Sequences:

>Translated_119_residues
MMQKRDKRIDDQVRTTLEILDNLPQLEAHHLFRVHLMNRIEQNSPGMLHMPYMAGYGLKMALMALLVVINIGTAFLFMQS
GNDSAMISENDMLERLNNEYSSPALSYYLDETQEDAALE
>Mature_119_residues
MMQKRDKRIDDQVRTTLEILDNLPQLEAHHLFRVHLMNRIEQNSPGMLHMPYMAGYGLKMALMALLVVINIGTAFLFMQS
GNDSAMISENDMLERLNNEYSSPALSYYLDETQEDAALE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13680; Mature: 13680

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
9.2 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
9.2 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQKRDKRIDDQVRTTLEILDNLPQLEAHHLFRVHLMNRIEQNSPGMLHMPYMAGYGLKM
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHCCCHHH
ALMALLVVINIGTAFLFMQSGNDSAMISENDMLERLNNEYSSPALSYYLDETQEDAALE
HHHHHHHHHHHHHHEEEEECCCCCEEECHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MMQKRDKRIDDQVRTTLEILDNLPQLEAHHLFRVHLMNRIEQNSPGMLHMPYMAGYGLKM
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHCCCHHH
ALMALLVVINIGTAFLFMQSGNDSAMISENDMLERLNNEYSSPALSYYLDETQEDAALE
HHHHHHHHHHHHHHEEEEECCCCCEEECHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA