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The map label for this gene is 194333183

Identifier: 194333183

GI number: 194333183

Start: 369872

End: 370501

Strand: Reverse

Name: 194333183

Synonym: Paes_0339

Alternate gene names: NA

Gene position: 370501-369872 (Counterclockwise)

Preceding gene: 194333184

Following gene: 194333182

Centisome position: 14.74

GC content: 48.25

Gene sequence:

>630_bases
ATGCAGGCCAAGCTTTTTAACGACATACCGCAGCAAACACCGCAACGCGACAGGAACGACTACCACTCTCTCGACGAGCT
TGGTGCCCAATCAAAAAACTGCACACAATGCCAGCTTGCCGAAACACGACAGAACGTTGTCTTCGGTGAAGGAAATCCTC
AGGCTAAAATCGTTGTTATAGGGGAAGGGCCAGGAGCTGAAGAGGATGCTCAGGGACGGCCTTTTGTAGGACGTTCAGGA
AAACTGCTCGATAAAATACTTCAATCCATAGGTTTTGACAGAAACGATGTTTATATCTGCAACATAGTCAAGTGTCGGCC
GCCCGCAAACAGAAACCCCCTTGCAGAGGAAATAGAACAATGTCTTCCCTGGCTCAATGCACAGCTCGAGCTGATTCAAC
CGGGAATAATTCTTCTTCTCGGAAAAGTGGCAGCCAATACTATACTGCAGAACAAGTGCTCCATGGGTTCCATGCGGGGA
AGCATTATACGATGGGGAACGTACGATGTGGTCGTCACCTATCATCCGGCCGCACTACTGAGAAACCCCAACTGGAAATA
CCAATGCTGGGAGGACGTCAAAATGCTGAGAAAACATTTTGATTCAATGTACCAAAGCAATCAGCCCTGA

Upstream 100 bases:

>100_bases
ACGCAGCAATCCGGCTACTCGATGCCATTGAATCACTGCTGAGCAGACCGGACAACGGCTGACAAGCTCCATTCACTCTC
GACCATCCATATCGTCAACC

Downstream 100 bases:

>100_bases
CAATTGACCATGAAAGGAACTATCGCCAGAAAAGGCAATGGAGGAATCGATCTGGGCAAGGATATCGATTTTTCCCAGGA
AAGCAGAATCCCTCCATACT

Product: phage SPO1 DNA polymerase-like protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; DNA Polymerase Bacteriophage-Type; Uracil DNA Glycosylase Superfamily Protein; DNA-Directed DNA Polymerase; DNA Polymerase-Related Protein Bacteriophage-Type; Phage Spo1 DNA Polymerase-Related Protein; DNA Glycosylase; Uracil-DNA Glycosylase Family 4 Protein; Bacteriophage-Related DNA Polymerase; Phage DNA Polymerase; DNA Polymerase-Related Protein; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Polymerase Domain-Containing Protein; Phage Related DNA Polymerase; Phage SpO1 DNA Polymerase-Related Protein; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; Phage DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type; Uracil-DNA Glycosylase Phage-Related Protein; Uracil-DNA Glycosylase Superfamily Protein; Phage Shock Protein E; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein; N-Terminus Of Phage SPO1 DNA Polymerase

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MQAKLFNDIPQQTPQRDRNDYHSLDELGAQSKNCTQCQLAETRQNVVFGEGNPQAKIVVIGEGPGAEEDAQGRPFVGRSG
KLLDKILQSIGFDRNDVYICNIVKCRPPANRNPLAEEIEQCLPWLNAQLELIQPGIILLLGKVAANTILQNKCSMGSMRG
SIIRWGTYDVVVTYHPAALLRNPNWKYQCWEDVKMLRKHFDSMYQSNQP

Sequences:

>Translated_209_residues
MQAKLFNDIPQQTPQRDRNDYHSLDELGAQSKNCTQCQLAETRQNVVFGEGNPQAKIVVIGEGPGAEEDAQGRPFVGRSG
KLLDKILQSIGFDRNDVYICNIVKCRPPANRNPLAEEIEQCLPWLNAQLELIQPGIILLLGKVAANTILQNKCSMGSMRG
SIIRWGTYDVVVTYHPAALLRNPNWKYQCWEDVKMLRKHFDSMYQSNQP
>Mature_209_residues
MQAKLFNDIPQQTPQRDRNDYHSLDELGAQSKNCTQCQLAETRQNVVFGEGNPQAKIVVIGEGPGAEEDAQGRPFVGRSG
KLLDKILQSIGFDRNDVYICNIVKCRPPANRNPLAEEIEQCLPWLNAQLELIQPGIILLLGKVAANTILQNKCSMGSMRG
SIIRWGTYDVVVTYHPAALLRNPNWKYQCWEDVKMLRKHFDSMYQSNQP

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 23612; Mature: 23612

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAKLFNDIPQQTPQRDRNDYHSLDELGAQSKNCTQCQLAETRQNVVFGEGNPQAKIVVI
CCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCEEEECCCCCEEEEEE
GEGPGAEEDAQGRPFVGRSGKLLDKILQSIGFDRNDVYICNIVKCRPPANRNPLAEEIEQ
ECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHH
CLPWLNAQLELIQPGIILLLGKVAANTILQNKCSMGSMRGSIIRWGTYDVVVTYHPAALL
HHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEEECCHHHH
RNPNWKYQCWEDVKMLRKHFDSMYQSNQP
CCCCCCEECHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQAKLFNDIPQQTPQRDRNDYHSLDELGAQSKNCTQCQLAETRQNVVFGEGNPQAKIVVI
CCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCEEEECCCCCEEEEEE
GEGPGAEEDAQGRPFVGRSGKLLDKILQSIGFDRNDVYICNIVKCRPPANRNPLAEEIEQ
ECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHHHHHH
CLPWLNAQLELIQPGIILLLGKVAANTILQNKCSMGSMRGSIIRWGTYDVVVTYHPAALL
HHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEEECCHHHH
RNPNWKYQCWEDVKMLRKHFDSMYQSNQP
CCCCCCEECHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA