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The map label for this gene is ybbC [H]

Identifier: 194333077

GI number: 194333077

Start: 243991

End: 245151

Strand: Reverse

Name: ybbC [H]

Synonym: Paes_0233

Alternate gene names: 194333077

Gene position: 245151-243991 (Counterclockwise)

Preceding gene: 194333078

Following gene: 194333076

Centisome position: 9.76

GC content: 52.28

Gene sequence:

>1161_bases
ATGATCGCTACCGGACTGGACCTGCTGCTGCAGGACACCTCGGCACTCAAAGGAAAAAACATTGCCCTGATTGCCAATCA
GACATCCGTCACCCGAGATCTCGACTACTCATGGAATGCTCTTGCCGAAAAGGGTATCCGCCTGAAACGGATTTTCTCCC
CCGAACACGGGCTTTTTGCAACCGAACAGGATCAGGTGGCTGTAACAGTTCAACCCGAAACAGGCTGTGACATCGTCAGT
CTGTATGGGGACTGCATGGAAAGCCTGCTTCCCGATGAGTCCCTCTTCGACGATATAGACATTCTGCTTTTCGATATCCA
GGATGTCGGAGCCAGATACTATACCTACGTCAACACGCTCGCCCTGATCATGGAGGCAATAGACGGGCGGGATATCGAGC
TCATCATTCTTGACCGCCCTAACCCGCTTGGGGGCATCCATGTCGAAGGACCTATGCCTGACCCCGCCTACCGTTCATTT
GTCGGGATTTTTCCTGTACCCGTTCGCCATGCCATGACTCCGGGAGAACTGGCACACCTCTATCGCGATTGGCGAAAAAT
CGACATCAATCTTACCGTCATCTCATTGCAGGGATGGCAGCGAACCATGAATTTCAGCAAAACAGGCCTCCCCTGGATAC
CCCCATCTCCGAATATGCCCACCACGGAAACAGCTCTGGTCTATCCCGGGATGTGCCTGCTCGAAGGACTCAATATTTCA
GAAGGCAGAGGGACAACAACCCCCTTCCTCCATTTCGGAGCACCGTTCATTGAACCCTATGACCTGAAAAAATCGCTTGA
CGAACTCGAGCTGGAAGGGGTGATCTTCCGACCGACATTTTTCAAACCGTCGTTTCACAAATACAGCAATGAAGTCGCAG
GCGGGCTCTTTCTCCACGTCTGTGATCCGGAAAGCTTCGACGCATTCTCGACCGCTATCGCTCTGACAGCCGCGCTTCAG
CGCCTCTATCCGCAAGAACTCCGTTTTCTTGATGAAGTCTATGAATTCAACGCAACCTTCCCCGCATTCGATCTTCTCTG
CGGCAGCGGATCGCTTCGCAGGATGATCTCTGAAAACCGCCCGTTTGAGGAACTGAGAGCCTCATGGAAAAAGGATGAGG
CAGCATTTCTTTCTGCCAAGGAAATCTTTCACCTCTACTGA

Upstream 100 bases:

>100_bases
CCGGCGTCTCGATCGATGAACGACAGATCGTCAGCAACAGCATCGTCTATACAGAAGGAATCATTACTCTCAACCAGGTA
ATCACGGAGAACCCCGGCTC

Downstream 100 bases:

>100_bases
CCCTGATGCACCATGCAGCCACTTGACCTGTCCATTATCATCGTTTTTCTCCTGGCAATGACCGTGTACGGTATATGGCA
GGGGCACACCAACCGTTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MIATGLDLLLQDTSALKGKNIALIANQTSVTRDLDYSWNALAEKGIRLKRIFSPEHGLFATEQDQVAVTVQPETGCDIVS
LYGDCMESLLPDESLFDDIDILLFDIQDVGARYYTYVNTLALIMEAIDGRDIELIILDRPNPLGGIHVEGPMPDPAYRSF
VGIFPVPVRHAMTPGELAHLYRDWRKIDINLTVISLQGWQRTMNFSKTGLPWIPPSPNMPTTETALVYPGMCLLEGLNIS
EGRGTTTPFLHFGAPFIEPYDLKKSLDELELEGVIFRPTFFKPSFHKYSNEVAGGLFLHVCDPESFDAFSTAIALTAALQ
RLYPQELRFLDEVYEFNATFPAFDLLCGSGSLRRMISENRPFEELRASWKKDEAAFLSAKEIFHLY

Sequences:

>Translated_386_residues
MIATGLDLLLQDTSALKGKNIALIANQTSVTRDLDYSWNALAEKGIRLKRIFSPEHGLFATEQDQVAVTVQPETGCDIVS
LYGDCMESLLPDESLFDDIDILLFDIQDVGARYYTYVNTLALIMEAIDGRDIELIILDRPNPLGGIHVEGPMPDPAYRSF
VGIFPVPVRHAMTPGELAHLYRDWRKIDINLTVISLQGWQRTMNFSKTGLPWIPPSPNMPTTETALVYPGMCLLEGLNIS
EGRGTTTPFLHFGAPFIEPYDLKKSLDELELEGVIFRPTFFKPSFHKYSNEVAGGLFLHVCDPESFDAFSTAIALTAALQ
RLYPQELRFLDEVYEFNATFPAFDLLCGSGSLRRMISENRPFEELRASWKKDEAAFLSAKEIFHLY
>Mature_386_residues
MIATGLDLLLQDTSALKGKNIALIANQTSVTRDLDYSWNALAEKGIRLKRIFSPEHGLFATEQDQVAVTVQPETGCDIVS
LYGDCMESLLPDESLFDDIDILLFDIQDVGARYYTYVNTLALIMEAIDGRDIELIILDRPNPLGGIHVEGPMPDPAYRSF
VGIFPVPVRHAMTPGELAHLYRDWRKIDINLTVISLQGWQRTMNFSKTGLPWIPPSPNMPTTETALVYPGMCLLEGLNIS
EGRGTTTPFLHFGAPFIEPYDLKKSLDELELEGVIFRPTFFKPSFHKYSNEVAGGLFLHVCDPESFDAFSTAIALTAALQ
RLYPQELRFLDEVYEFNATFPAFDLLCGSGSLRRMISENRPFEELRASWKKDEAAFLSAKEIFHLY

Specific function: Unknown

COG id: COG3876

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008302 [H]

Pfam domain/function: PF07075 DUF1343 [H]

EC number: NA

Molecular weight: Translated: 43401; Mature: 43401

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIATGLDLLLQDTSALKGKNIALIANQTSVTRDLDYSWNALAEKGIRLKRIFSPEHGLFA
CCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCEE
TEQDQVAVTVQPETGCDIVSLYGDCMESLLPDESLFDDIDILLFDIQDVGARYYTYVNTL
CCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHCCCEEEEEEHHHHCHHHHHHHHHH
ALIMEAIDGRDIELIILDRPNPLGGIHVEGPMPDPAYRSFVGIFPVPVRHAMTPGELAHL
HHHHHHHCCCCEEEEEEECCCCCCCEEECCCCCCHHHHHHHCCCCCCHHHCCCHHHHHHH
YRDWRKIDINLTVISLQGWQRTMNFSKTGLPWIPPSPNMPTTETALVYPGMCLLEGLNIS
HHHHEEEEEEEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHCCCCCC
EGRGTTTPFLHFGAPFIEPYDLKKSLDELELEGVIFRPTFFKPSFHKYSNEVAGGLFLHV
CCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHCCCEEEEEE
CDPESFDAFSTAIALTAALQRLYPQELRFLDEVYEFNATFPAFDLLCGSGSLRRMISENR
ECCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHCCC
PFEELRASWKKDEAAFLSAKEIFHLY
CHHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MIATGLDLLLQDTSALKGKNIALIANQTSVTRDLDYSWNALAEKGIRLKRIFSPEHGLFA
CCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCEE
TEQDQVAVTVQPETGCDIVSLYGDCMESLLPDESLFDDIDILLFDIQDVGARYYTYVNTL
CCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHCCCEEEEEEHHHHCHHHHHHHHHH
ALIMEAIDGRDIELIILDRPNPLGGIHVEGPMPDPAYRSFVGIFPVPVRHAMTPGELAHL
HHHHHHHCCCCEEEEEEECCCCCCCEEECCCCCCHHHHHHHCCCCCCHHHCCCHHHHHHH
YRDWRKIDINLTVISLQGWQRTMNFSKTGLPWIPPSPNMPTTETALVYPGMCLLEGLNIS
HHHHEEEEEEEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHCCCCCC
EGRGTTTPFLHFGAPFIEPYDLKKSLDELELEGVIFRPTFFKPSFHKYSNEVAGGLFLHV
CCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHCCCEEEEEE
CDPESFDAFSTAIALTAALQRLYPQELRFLDEVYEFNATFPAFDLLCGSGSLRRMISENR
ECCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHCCC
PFEELRASWKKDEAAFLSAKEIFHLY
CHHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8011666; 9274029; 9384377 [H]