Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
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Accession | NC_011059 |
Length | 2,512,923 |
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The map label for this gene is sglT [H]
Identifier: 194333076
GI number: 194333076
Start: 242575
End: 243978
Strand: Reverse
Name: sglT [H]
Synonym: Paes_0232
Alternate gene names: 194333076
Gene position: 243978-242575 (Counterclockwise)
Preceding gene: 194333077
Following gene: 194333075
Centisome position: 9.71
GC content: 51.78
Gene sequence:
>1404_bases ATGCAGCCACTTGACCTGTCCATTATCATCGTTTTTCTCCTGGCAATGACCGTGTACGGTATATGGCAGGGGCACACCAA CCGTTCGACCGGAGACTATTTTCTCGGAGGAAGAAATCTGCCGTGGATAGTCGCCATGCTCTCAATCGTTGCAACAGAAA CGTCTGTTCTGACCTTTGTCAGTATTCCCGGCATCGCCTACAGGGGAGACTGGACCTTTCTTCAGCTCGCCATGGGCTAC ATTCTCGGGAGAATTCTCGTCAGCGCAATCCTGCTGCCCGTCTATTTCAAGCAGGGAGTCTCTTCCATCTACGAGGTCAT CGGAAAGCGTTTCGGAAAACCGATGCAGAAACTCTCTTCCATCGTCTTCCTTATCACCAGAATTCTTGCTGACGGGGTCC GGTTTCTGGCGACGGCTGTCGTCGTCGAAGCAGTCACCGGCTGGCCGATGCCTGTCGCTGTTCTCATTATCGGAGTGGTA ACCCTTATCTATACCCTCTCTGGCGGTATTAAAACGGTTGTCTGGCTCGACAGCATCCAGTTCATGCTCTACCTTGCCGG AGGAGTACTCACCATCGGTTTCATTCTTTCATCTCTTGACGCAGATCCGGCAAGCGCCCTGCTCTCTCTTGCCAGGGAAG GAAAGCTCAGGATCATCAATACCGATACCCACCTCCTGAGTAACCCCTGGGCATTTTTCAGCGCTTTTGCCGGTGGAACG CTGCTCTCCTTCGCATCTCACGGCGTTGACTATATGATGGTCCAGCGAGCACTCGGCTGTAAAAACCTTGAGTCGGCTCA AAAAGCAATGATCGGCAGCGGTGTCTTTGTGTTCATACAATTCTCCGTCTTCCTGCTGGCAGGCTCACTTATCTACCTCT ATCTTGAAGGAGATCTGAATGTCGCAAAAGACAGAGAATTTGCAACATTCATCGTCAGCTACCTACCGCCCGGCCTCAAA GGACTCCTTCTGGCTGGTGTTCTCTCGGCGGCTATGTCGACGCTCAGCTCTTCGATCAATGCTCTTGCCTCGTCGACCGT CACCGACCTTCTGGGGGGGAAAGCGTCGTTAAACCAGTCCCGCCTGATCAGTTTCGTATGGGCTGCAATACTTATTGCCA TAGCGCTGGGATTTGATGAAAGTGACAATGCCATTGTCATTCTCGGACTGCAGATCGCATCGTTCACCTATGGCGGACTG CTCAGCCTCTTTCTTCTCTCGCAGAGCAAAAAAACATTTCACCCCGCAAGCCTTGCTGCAGGGCTCATGACAGGAATGGG CAGCGTTTTTCTTCTTCAGTACGCAGGTATTGCCTGGACGTGGTATATTTCGTTCTCTCTCGTGATCAATATTTCAACCG CTTTTATCGTGAACCTTCTGCTGCCGGCCAGGAATCAGACGTAA
Upstream 100 bases:
>100_bases AAACCGCCCGTTTGAGGAACTGAGAGCCTCATGGAAAAAGGATGAGGCAGCATTTCTTTCTGCCAAGGAAATCTTTCACC TCTACTGACCCTGATGCACC
Downstream 100 bases:
>100_bases AAGAATAGGCTTTGGAGTACATGACCAGTTTGCATGACATAATTATTTCTCTAAATTAGATATATAGCGTTCCTCACTAA CGGCCAACAGCAAAAGAATC
Product: Na+/solute symporter
Products: Na (I) [Cytoplasm]; pantothenate [Cytoplasm] [C]
Alternate protein names: Na(+)/glucose symporter [H]
Number of amino acids: Translated: 467; Mature: 467
Protein sequence:
>467_residues MQPLDLSIIIVFLLAMTVYGIWQGHTNRSTGDYFLGGRNLPWIVAMLSIVATETSVLTFVSIPGIAYRGDWTFLQLAMGY ILGRILVSAILLPVYFKQGVSSIYEVIGKRFGKPMQKLSSIVFLITRILADGVRFLATAVVVEAVTGWPMPVAVLIIGVV TLIYTLSGGIKTVVWLDSIQFMLYLAGGVLTIGFILSSLDADPASALLSLAREGKLRIINTDTHLLSNPWAFFSAFAGGT LLSFASHGVDYMMVQRALGCKNLESAQKAMIGSGVFVFIQFSVFLLAGSLIYLYLEGDLNVAKDREFATFIVSYLPPGLK GLLLAGVLSAAMSTLSSSINALASSTVTDLLGGKASLNQSRLISFVWAAILIAIALGFDESDNAIVILGLQIASFTYGGL LSLFLLSQSKKTFHPASLAAGLMTGMGSVFLLQYAGIAWTWYISFSLVINISTAFIVNLLLPARNQT
Sequences:
>Translated_467_residues MQPLDLSIIIVFLLAMTVYGIWQGHTNRSTGDYFLGGRNLPWIVAMLSIVATETSVLTFVSIPGIAYRGDWTFLQLAMGY ILGRILVSAILLPVYFKQGVSSIYEVIGKRFGKPMQKLSSIVFLITRILADGVRFLATAVVVEAVTGWPMPVAVLIIGVV TLIYTLSGGIKTVVWLDSIQFMLYLAGGVLTIGFILSSLDADPASALLSLAREGKLRIINTDTHLLSNPWAFFSAFAGGT LLSFASHGVDYMMVQRALGCKNLESAQKAMIGSGVFVFIQFSVFLLAGSLIYLYLEGDLNVAKDREFATFIVSYLPPGLK GLLLAGVLSAAMSTLSSSINALASSTVTDLLGGKASLNQSRLISFVWAAILIAIALGFDESDNAIVILGLQIASFTYGGL LSLFLLSQSKKTFHPASLAAGLMTGMGSVFLLQYAGIAWTWYISFSLVINISTAFIVNLLLPARNQT >Mature_467_residues MQPLDLSIIIVFLLAMTVYGIWQGHTNRSTGDYFLGGRNLPWIVAMLSIVATETSVLTFVSIPGIAYRGDWTFLQLAMGY ILGRILVSAILLPVYFKQGVSSIYEVIGKRFGKPMQKLSSIVFLITRILADGVRFLATAVVVEAVTGWPMPVAVLIIGVV TLIYTLSGGIKTVVWLDSIQFMLYLAGGVLTIGFILSSLDADPASALLSLAREGKLRIINTDTHLLSNPWAFFSAFAGGT LLSFASHGVDYMMVQRALGCKNLESAQKAMIGSGVFVFIQFSVFLLAGSLIYLYLEGDLNVAKDREFATFIVSYLPPGLK GLLLAGVLSAAMSTLSSSINALASSTVTDLLGGKASLNQSRLISFVWAAILIAIALGFDESDNAIVILGLQIASFTYGGL LSLFLLSQSKKTFHPASLAAGLMTGMGSVFLLQYAGIAWTWYISFSLVINISTAFIVNLLLPARNQT
Specific function: Actively transports glucose into cells by Na(+) cotransport [H]
COG id: COG0591
COG function: function code ER; Na+/proline symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI4507035, Length=378, Percent_Identity=28.042328042328, Blast_Score=144, Evalue=3e-34, Organism=Homo sapiens, GI157671931, Length=335, Percent_Identity=29.8507462686567, Blast_Score=135, Evalue=8e-32, Organism=Homo sapiens, GI167466278, Length=385, Percent_Identity=30.1298701298701, Blast_Score=134, Evalue=3e-31, Organism=Homo sapiens, GI256985183, Length=435, Percent_Identity=25.9770114942529, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI4507031, Length=391, Percent_Identity=23.7851662404092, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI4507033, Length=416, Percent_Identity=23.0769230769231, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI110835708, Length=432, Percent_Identity=22.9166666666667, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI14140236, Length=393, Percent_Identity=24.6819338422392, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI206597483, Length=383, Percent_Identity=24.0208877284595, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI17941285, Length=389, Percent_Identity=21.8508997429306, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI206597487, Length=309, Percent_Identity=24.5954692556634, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI109659836, Length=383, Percent_Identity=22.7154046997389, Blast_Score=72, Evalue=2e-12, Organism=Escherichia coli, GI87082237, Length=380, Percent_Identity=26.3157894736842, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1790113, Length=334, Percent_Identity=25.4491017964072, Blast_Score=72, Evalue=7e-14, Organism=Caenorhabditis elegans, GI115533094, Length=338, Percent_Identity=27.810650887574, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI32566512, Length=279, Percent_Identity=27.9569892473118, Blast_Score=87, Evalue=3e-17, Organism=Caenorhabditis elegans, GI115533096, Length=214, Percent_Identity=29.4392523364486, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI28573698, Length=362, Percent_Identity=27.0718232044199, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI24645928, Length=365, Percent_Identity=29.041095890411, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI221459584, Length=400, Percent_Identity=29.5, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24641117, Length=453, Percent_Identity=24.9448123620309, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI24651741, Length=395, Percent_Identity=25.5696202531646, Blast_Score=102, Evalue=5e-22, Organism=Drosophila melanogaster, GI24640370, Length=390, Percent_Identity=26.1538461538462, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24651739, Length=424, Percent_Identity=24.5283018867925, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI24650192, Length=400, Percent_Identity=26.75, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI221459588, Length=405, Percent_Identity=27.1604938271605, Blast_Score=93, Evalue=4e-19, Organism=Drosophila melanogaster, GI161076631, Length=389, Percent_Identity=27.7634961439589, Blast_Score=93, Evalue=5e-19, Organism=Drosophila melanogaster, GI281362054, Length=454, Percent_Identity=24.4493392070485, Blast_Score=92, Evalue=6e-19, Organism=Drosophila melanogaster, GI281362052, Length=454, Percent_Identity=24.4493392070485, Blast_Score=92, Evalue=6e-19, Organism=Drosophila melanogaster, GI281362050, Length=454, Percent_Identity=24.4493392070485, Blast_Score=92, Evalue=6e-19, Organism=Drosophila melanogaster, GI24648056, Length=454, Percent_Identity=24.4493392070485, Blast_Score=92, Evalue=6e-19, Organism=Drosophila melanogaster, GI21356827, Length=454, Percent_Identity=24.4493392070485, Blast_Score=92, Evalue=6e-19, Organism=Drosophila melanogaster, GI281362918, Length=276, Percent_Identity=25, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI28574994, Length=345, Percent_Identity=24.6376811594203, Blast_Score=89, Evalue=6e-18, Organism=Drosophila melanogaster, GI19920916, Length=369, Percent_Identity=27.9132791327913, Blast_Score=86, Evalue=7e-17, Organism=Drosophila melanogaster, GI281364280, Length=370, Percent_Identity=26.2162162162162, Blast_Score=82, Evalue=7e-16, Organism=Drosophila melanogaster, GI221459586, Length=413, Percent_Identity=27.1186440677966, Blast_Score=82, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 50198; Mature: 50198
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPLDLSIIIVFLLAMTVYGIWQGHTNRSTGDYFLGGRNLPWIVAMLSIVATETSVLTFV CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHEEEE SIPGIAYRGDWTFLQLAMGYILGRILVSAILLPVYFKQGVSSIYEVIGKRFGKPMQKLSS ECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH IVFLITRILADGVRFLATAVVVEAVTGWPMPVAVLIIGVVTLIYTLSGGIKTVVWLDSIQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHH FMLYLAGGVLTIGFILSSLDADPASALLSLAREGKLRIINTDTHLLSNPWAFFSAFAGGT HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCHHHHCCCHHHHHHHCCHH LLSFASHGVDYMMVQRALGCKNLESAQKAMIGSGVFVFIQFSVFLLAGSLIYLYLEGDLN HHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCC VAKDREFATFIVSYLPPGLKGLLLAGVLSAAMSTLSSSINALASSTVTDLLGGKASLNQS CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH RLISFVWAAILIAIALGFDESDNAIVILGLQIASFTYGGLLSLFLLSQSKKTFHPASLAA HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH GLMTGMGSVFLLQYAGIAWTWYISFSLVINISTAFIVNLLLPARNQT HHHHHHHHHHHHHHHCHHEEEEEEEHHEEEHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQPLDLSIIIVFLLAMTVYGIWQGHTNRSTGDYFLGGRNLPWIVAMLSIVATETSVLTFV CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHEEEE SIPGIAYRGDWTFLQLAMGYILGRILVSAILLPVYFKQGVSSIYEVIGKRFGKPMQKLSS ECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH IVFLITRILADGVRFLATAVVVEAVTGWPMPVAVLIIGVVTLIYTLSGGIKTVVWLDSIQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHH FMLYLAGGVLTIGFILSSLDADPASALLSLAREGKLRIINTDTHLLSNPWAFFSAFAGGT HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCHHHHCCCHHHHHHHCCHH LLSFASHGVDYMMVQRALGCKNLESAQKAMIGSGVFVFIQFSVFLLAGSLIYLYLEGDLN HHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCC VAKDREFATFIVSYLPPGLKGLLLAGVLSAAMSTLSSSINALASSTVTDLLGGKASLNQS CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH RLISFVWAAILIAIALGFDESDNAIVILGLQIASFTYGGLLSLFLLSQSKKTFHPASLAA HHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH GLMTGMGSVFLLQYAGIAWTWYISFSLVINISTAFIVNLLLPARNQT HHHHHHHHHHHHHHHCHHEEEEEEEHHEEEHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Na (I) [Periplasm]; pantothenate [Periplasm] [C]
Specific reaction: Na (I) [Periplasm] + pantothenate [Periplasm] = Na (I) [Cytoplasm] + pantothenate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8652595; 10835424; 10757971 [H]