Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
---|---|
Accession | NC_011059 |
Length | 2,512,923 |
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The map label for this gene is mpg1 [H]
Identifier: 194333078
GI number: 194333078
Start: 245148
End: 246107
Strand: Reverse
Name: mpg1 [H]
Synonym: Paes_0234
Alternate gene names: 194333078
Gene position: 246107-245148 (Counterclockwise)
Preceding gene: 194333079
Following gene: 194333077
Centisome position: 9.79
GC content: 50.83
Gene sequence:
>960_bases ATGAAAGCCTTCGTTCTCGCTGCCGGCTTCGGAACACGACTCAGACCGCTGACCGTCAGCATACCCAAACCACTGATACC CGTCCTGAACATTCCCTCGCTGTGCTACACGCTCTTCCTTCTCAAAGAAGCGGGCATCAGGGACATCGTCTGCAACCTGC ACTATCATGCAGATGCCATCGTCAGATATCTCGAAGAGCAGGATTTTTTCGGCATGAATATCATGATCTCGGAGGAAAAA GAGATCCTCGGTACCGGAGGAGGTCTGAAAAAATGCGAATCATTGCTCAAGGATGATGATTTTGTCCTGATCAACAGCGA TATTATTACTGATATCAGCCTCGATGCGCTCATCAAGGCCTACCGCAGGAGCGACGCGTCAGGAGTACTCATGCTTCATG AAACCCCCCAGGCTGGAGCTATTGGCCATATTGGTGTTCAGAACGGAATGGTCAAGGATTTCAGGAACATGCGAAGAACG GAACTCCGATCAGACCTTATTTATACAGGAACCGCCGTTCTCAGCCCGGATATCTTCAATCATCTGCAAACAGGGTTTTC AAGCATTGTCGACACGGGCTTTACAGGCCTTATCGATAACGGCGGGGTGGCATCATATGTACATGACGGACTCTGGCAGG ATATCGGTACACTTGAAGAGTACCTCTACAGCTCAACACACAAAAACAGACCGGTTCTGGAGCTTGGCAACCGTATGCAG AACGCTCTCGGAATCAGGCCGCATATGCTTGCCGACGATGCCCGAATCAGTCCGGAAGCAACCGTTACATCATCGGTTAT CGGTAAAGGTTGCCAGGTCGGCCCTGGCGCAATCATAGAGAACGCTCTACTCCTGCCCGGCGTCTCGATCGATGAACGAC AGATCGTCAGCAACAGCATCGTCTATACAGAAGGAATCATTACTCTCAACCAGGTAATCACGGAGAACCCCGGCTCATGA
Upstream 100 bases:
>100_bases TTGAACCCACAATCGCCTATCTTCCCGACTATATAAACCGGCATGCCGAACTCAAAACAGCAGGCAGAATCATCATGGAA ACTCTGGCACCATCTTTATC
Downstream 100 bases:
>100_bases TCGCTACCGGACTGGACCTGCTGCTGCAGGACACCTCGGCACTCAAAGGAAAAAACATTGCCCTGATTGCCAATCAGACA TCCGTCACCCGAGATCTCGA
Product: Nucleotidyl transferase
Products: NA
Alternate protein names: ATP-mannose-1-phosphate guanylyltransferase; GDP-mannose pyrophosphorylase; NDP-hexose pyrophosphorylase [H]
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MKAFVLAAGFGTRLRPLTVSIPKPLIPVLNIPSLCYTLFLLKEAGIRDIVCNLHYHADAIVRYLEEQDFFGMNIMISEEK EILGTGGGLKKCESLLKDDDFVLINSDIITDISLDALIKAYRRSDASGVLMLHETPQAGAIGHIGVQNGMVKDFRNMRRT ELRSDLIYTGTAVLSPDIFNHLQTGFSSIVDTGFTGLIDNGGVASYVHDGLWQDIGTLEEYLYSSTHKNRPVLELGNRMQ NALGIRPHMLADDARISPEATVTSSVIGKGCQVGPGAIIENALLLPGVSIDERQIVSNSIVYTEGIITLNQVITENPGS
Sequences:
>Translated_319_residues MKAFVLAAGFGTRLRPLTVSIPKPLIPVLNIPSLCYTLFLLKEAGIRDIVCNLHYHADAIVRYLEEQDFFGMNIMISEEK EILGTGGGLKKCESLLKDDDFVLINSDIITDISLDALIKAYRRSDASGVLMLHETPQAGAIGHIGVQNGMVKDFRNMRRT ELRSDLIYTGTAVLSPDIFNHLQTGFSSIVDTGFTGLIDNGGVASYVHDGLWQDIGTLEEYLYSSTHKNRPVLELGNRMQ NALGIRPHMLADDARISPEATVTSSVIGKGCQVGPGAIIENALLLPGVSIDERQIVSNSIVYTEGIITLNQVITENPGS >Mature_319_residues MKAFVLAAGFGTRLRPLTVSIPKPLIPVLNIPSLCYTLFLLKEAGIRDIVCNLHYHADAIVRYLEEQDFFGMNIMISEEK EILGTGGGLKKCESLLKDDDFVLINSDIITDISLDALIKAYRRSDASGVLMLHETPQAGAIGHIGVQNGMVKDFRNMRRT ELRSDLIYTGTAVLSPDIFNHLQTGFSSIVDTGFTGLIDNGGVASYVHDGLWQDIGTLEEYLYSSTHKNRPVLELGNRMQ NALGIRPHMLADDARISPEATVTSSVIGKGCQVGPGAIIENALLLPGVSIDERQIVSNSIVYTEGIITLNQVITENPGS
Specific function: Lipopolysaccharide biosynthesis. [C]
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Homo sapiens, GI11761621, Length=302, Percent_Identity=28.1456953642384, Blast_Score=123, Evalue=2e-28, Organism=Homo sapiens, GI11761619, Length=317, Percent_Identity=27.4447949526814, Blast_Score=123, Evalue=3e-28, Organism=Homo sapiens, GI31881779, Length=344, Percent_Identity=25.5813953488372, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI45447090, Length=344, Percent_Identity=25.5813953488372, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI133931050, Length=320, Percent_Identity=28.4375, Blast_Score=114, Evalue=6e-26, Organism=Caenorhabditis elegans, GI17509979, Length=328, Percent_Identity=25, Blast_Score=69, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6320148, Length=315, Percent_Identity=29.5238095238095, Blast_Score=129, Evalue=7e-31, Organism=Drosophila melanogaster, GI21355443, Length=312, Percent_Identity=27.8846153846154, Blast_Score=121, Evalue=5e-28, Organism=Drosophila melanogaster, GI24644084, Length=312, Percent_Identity=27.8846153846154, Blast_Score=121, Evalue=5e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.13 [H]
Molecular weight: Translated: 34756; Mature: 34756
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAFVLAAGFGTRLRPLTVSIPKPLIPVLNIPSLCYTLFLLKEAGIRDIVCNLHYHADAI CCEEEEEECCCCCCCEEEEECCCCCHHHCCCHHHHHHHHHHHHCCHHHHHEECHHHHHHH VRYLEEQDFFGMNIMISEEKEILGTGGGLKKCESLLKDDDFVLINSDIITDISLDALIKA HHHHHHCCCCCEEEEEECCHHHHCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHH YRRSDASGVLMLHETPQAGAIGHIGVQNGMVKDFRNMRRTELRSDLIYTGTAVLSPDIFN HHCCCCCCEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHEEECHHHCCHHHHH HLQTGFSSIVDTGFTGLIDNGGVASYVHDGLWQDIGTLEEYLYSSTHKNRPVLELGNRMQ HHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH NALGIRPHMLADDARISPEATVTSSVIGKGCQVGPGAIIENALLLPGVSIDERQIVSNSI HHHCCCCCEECCCCCCCCCHHHHHHHHCCCCCCCCCHHHHCHHCCCCCCCCHHHHHHCCE VYTEGIITLNQVITENPGS EEECCHHHHHHHHHCCCCC >Mature Secondary Structure MKAFVLAAGFGTRLRPLTVSIPKPLIPVLNIPSLCYTLFLLKEAGIRDIVCNLHYHADAI CCEEEEEECCCCCCCEEEEECCCCCHHHCCCHHHHHHHHHHHHCCHHHHHEECHHHHHHH VRYLEEQDFFGMNIMISEEKEILGTGGGLKKCESLLKDDDFVLINSDIITDISLDALIKA HHHHHHCCCCCEEEEEECCHHHHCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHH YRRSDASGVLMLHETPQAGAIGHIGVQNGMVKDFRNMRRTELRSDLIYTGTAVLSPDIFN HHCCCCCCEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHEEECHHHCCHHHHH HLQTGFSSIVDTGFTGLIDNGGVASYVHDGLWQDIGTLEEYLYSSTHKNRPVLELGNRMQ HHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH NALGIRPHMLADDARISPEATVTSSVIGKGCQVGPGAIIENALLLPGVSIDERQIVSNSI HHHCCCCCEECCCCCCCCCHHHHHHHHCCCCCCCCCHHHHCHHCCCCCCCCHHHHHHCCE VYTEGIITLNQVITENPGS EEECCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8334170 [H]