| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193213587
Identifier: 193213587
GI number: 193213587
Start: 2148290
End: 2148994
Strand: Direct
Name: 193213587
Synonym: Cpar_1948
Alternate gene names: NA
Gene position: 2148290-2148994 (Clockwise)
Preceding gene: 193213586
Following gene: 193213588
Centisome position: 93.84
GC content: 56.74
Gene sequence:
>705_bases ATGCAGTGGCTTTATTGCGATTTTCACATCCATACGACCTGGAGTGACGGTTCGTGCTCGATTGACGAGGTGGTCGATCT GTACGGCGATGCGGGCTTCGACGTGATCGCCATCACCGACCACGTGCTCGACACCGAAAGCATCACGAGATACGGACGAC CGGTATCGGAACTTCAGGTCATGGACAGTTCACAATTCAGCGAGTACCAGGCAGCCTTGTGGCAAGGTGCGCGAAGAGCT TGGGAACGCTATGGAATGCTGCTCGTTCCGGGCGTCGAGCTAACCAACAACACCGGGCGCTACCACATCCTCGCCCTCGA CATCAAGGAGTACATCTCACCCGACCTCTCCGTCGAGGAGATCATCGAGGCCATCAGACGGCAGCATGGCATTTCTGTCG CCTGCCACCCCTACATCCGTAACCACTCGGGCGAGAACCCTTCCGCTCACCTCTGGCAGAACCACGAACGGCTCGCCGCG ATGTTCGATGCGTGGGAGGTGGCCAACCGCGACGACCTGTTCAACGTGGTCGGGTTGAAGAAGTTCAACTATATCGCCAA CTCCGACTTTCACGAACAGCGCCACCTGCTCTCGTGGAAAACGCTCCTGCGATGCGAAAAAAATGTCGAGTCGGTCAAGT CGGCCATCAGAACGAACGACCAGGTTTCGTTGTTTCTCTACCGCGGAGGGAAAATCAGGCAGTAA
Upstream 100 bases:
>100_bases AAGCCTGCCGCCTCACCCCGTCCCCGGAAAGTTCACACACCGTTCACGCCCTGTTCCCGCTTTTCACTGTACCTTTCGGC AAAACTTTACCCGAACGGCT
Downstream 100 bases:
>100_bases TTACTGAATACCTCTGCATTTATCAGCGAAACCGATTGAGAACAATATGACCGCCATTTCCCGACAGCTTGTTGGCTTGT ACGATTTTCTTGAGCATCTC
Product: PHP domain-containing protein
Products: NA
Alternate protein names: PHP Domain Protein; Phosphotransferase Domain-Containing Protein; PHP Domain; Phosphoesterase PHP-Like
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MQWLYCDFHIHTTWSDGSCSIDEVVDLYGDAGFDVIAITDHVLDTESITRYGRPVSELQVMDSSQFSEYQAALWQGARRA WERYGMLLVPGVELTNNTGRYHILALDIKEYISPDLSVEEIIEAIRRQHGISVACHPYIRNHSGENPSAHLWQNHERLAA MFDAWEVANRDDLFNVVGLKKFNYIANSDFHEQRHLLSWKTLLRCEKNVESVKSAIRTNDQVSLFLYRGGKIRQ
Sequences:
>Translated_234_residues MQWLYCDFHIHTTWSDGSCSIDEVVDLYGDAGFDVIAITDHVLDTESITRYGRPVSELQVMDSSQFSEYQAALWQGARRA WERYGMLLVPGVELTNNTGRYHILALDIKEYISPDLSVEEIIEAIRRQHGISVACHPYIRNHSGENPSAHLWQNHERLAA MFDAWEVANRDDLFNVVGLKKFNYIANSDFHEQRHLLSWKTLLRCEKNVESVKSAIRTNDQVSLFLYRGGKIRQ >Mature_234_residues MQWLYCDFHIHTTWSDGSCSIDEVVDLYGDAGFDVIAITDHVLDTESITRYGRPVSELQVMDSSQFSEYQAALWQGARRA WERYGMLLVPGVELTNNTGRYHILALDIKEYISPDLSVEEIIEAIRRQHGISVACHPYIRNHSGENPSAHLWQNHERLAA MFDAWEVANRDDLFNVVGLKKFNYIANSDFHEQRHLLSWKTLLRCEKNVESVKSAIRTNDQVSLFLYRGGKIRQ
Specific function: Unknown
COG id: COG0613
COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27032; Mature: 27032
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQWLYCDFHIHTTWSDGSCSIDEVVDLYGDAGFDVIAITDHVLDTESITRYGRPVSELQV CCEEEEEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECHHHCHHHHHHHCCCHHHHHH MDSSQFSEYQAALWQGARRAWERYGMLLVPGVELTNNTGRYHILALDIKEYISPDLSVEE HCCHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEECCCCEEEEEEEEHHHHCCCCCCHHH IIEAIRRQHGISVACHPYIRNHSGENPSAHLWQNHERLAAMFDAWEVANRDDLFNVVGLK HHHHHHHHCCCEEEEECHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHH KFNYIANSDFHEQRHLLSWKTLLRCEKNVESVKSAIRTNDQVSLFLYRGGKIRQ HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC >Mature Secondary Structure MQWLYCDFHIHTTWSDGSCSIDEVVDLYGDAGFDVIAITDHVLDTESITRYGRPVSELQV CCEEEEEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECHHHCHHHHHHHCCCHHHHHH MDSSQFSEYQAALWQGARRAWERYGMLLVPGVELTNNTGRYHILALDIKEYISPDLSVEE HCCHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEECCCCEEEEEEEEHHHHCCCCCCHHH IIEAIRRQHGISVACHPYIRNHSGENPSAHLWQNHERLAAMFDAWEVANRDDLFNVVGLK HHHHHHHHCCCEEEEECHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHH KFNYIANSDFHEQRHLLSWKTLLRCEKNVESVKSAIRTNDQVSLFLYRGGKIRQ HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA