| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193213588
Identifier: 193213588
GI number: 193213588
Start: 2149041
End: 2149910
Strand: Direct
Name: 193213588
Synonym: Cpar_1949
Alternate gene names: NA
Gene position: 2149041-2149910 (Clockwise)
Preceding gene: 193213587
Following gene: 193213589
Centisome position: 93.88
GC content: 57.93
Gene sequence:
>870_bases ATGACCGCCATTTCCCGACAGCTTGTTGGCTTGTACGATTTTCTTGAGCATCTCTGGGAGCATAAACGTACGGAGCGCAT CATCGCGCGCCTGCTGATCACCGTCTTCCTCGCCTTGCTCATTCTTATCGAGCTTTCACGACAGGGATTGCTGCCCGCGC AACTGGCCGCTTTACTGCCGCACAGCCACTTCTACGCCATCAACGTCGCCTTCTCCATGCTGCTCGGCCTCGAAGTGTTC GGACTGGTCTTCAGCCTCGCCAGCTCGGTCTCCGTGTCAGTCGGTAAACAGTTCGAGATTCTGTCGCTCATCCTGCTCCG CCACTCCTTCAAGGAGCTGGTCCATTTCAGCGAACCGCTCCACTGGGACAGCTCTACGGAGGCTGTGCTGCACATGCTCT CCAACGCCAGCGGCGGACTGGTGATCTTTGTGCTGCTCGGCGTCTATTACAAAATGCAGAAGCATCGCGCCATCACCTGC GACATCGAGGCCGCAACCCACTTCATCGCCTCGAAAAAGGTGGTCTCGCTGCTGCTGCTGGTGCTCTTCAGCATCATCGG CGTGATCGACGGAATCCGCTACCTGTCGGGCACCTCGCTCGAGAACTTCTTCTCGCTGTTCTACACGATTCTGGTCTTCA GCGACGTGCTGATCGTGCTGATTTCGTTGCGCTACAGCTCCGACTACCCGATCGTGTTCCGCAACTCGGGCTTCGCCTTC GCCACGGTGCTCATCCGGCTCGCCCTCACCGCACCGGCCTACTTCAACGTGCTCATCGGCATCGGGGCTGTTGTGTTCGC CATCGGCATCACCTACGCCTACAACCGCTTCGAGAAACCGGACATGGCCGACAATTCACTCTGCGAATAA
Upstream 100 bases:
>100_bases ACGAACGACCAGGTTTCGTTGTTTCTCTACCGCGGAGGGAAAATCAGGCAGTAATTACTGAATACCTCTGCATTTATCAG CGAAACCGATTGAGAACAAT
Downstream 100 bases:
>100_bases ACGCTGAATCCTGCTGCACGAACCGGAAATCGCGGTTGGCGACGGCTTAAAAAAGCTTCGCTTCATCGGGATATTTCCGT TTCTTTAGAGCGGAACTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MTAISRQLVGLYDFLEHLWEHKRTERIIARLLITVFLALLILIELSRQGLLPAQLAALLPHSHFYAINVAFSMLLGLEVF GLVFSLASSVSVSVGKQFEILSLILLRHSFKELVHFSEPLHWDSSTEAVLHMLSNASGGLVIFVLLGVYYKMQKHRAITC DIEAATHFIASKKVVSLLLLVLFSIIGVIDGIRYLSGTSLENFFSLFYTILVFSDVLIVLISLRYSSDYPIVFRNSGFAF ATVLIRLALTAPAYFNVLIGIGAVVFAIGITYAYNRFEKPDMADNSLCE
Sequences:
>Translated_289_residues MTAISRQLVGLYDFLEHLWEHKRTERIIARLLITVFLALLILIELSRQGLLPAQLAALLPHSHFYAINVAFSMLLGLEVF GLVFSLASSVSVSVGKQFEILSLILLRHSFKELVHFSEPLHWDSSTEAVLHMLSNASGGLVIFVLLGVYYKMQKHRAITC DIEAATHFIASKKVVSLLLLVLFSIIGVIDGIRYLSGTSLENFFSLFYTILVFSDVLIVLISLRYSSDYPIVFRNSGFAF ATVLIRLALTAPAYFNVLIGIGAVVFAIGITYAYNRFEKPDMADNSLCE >Mature_288_residues TAISRQLVGLYDFLEHLWEHKRTERIIARLLITVFLALLILIELSRQGLLPAQLAALLPHSHFYAINVAFSMLLGLEVFG LVFSLASSVSVSVGKQFEILSLILLRHSFKELVHFSEPLHWDSSTEAVLHMLSNASGGLVIFVLLGVYYKMQKHRAITCD IEAATHFIASKKVVSLLLLVLFSIIGVIDGIRYLSGTSLENFFSLFYTILVFSDVLIVLISLRYSSDYPIVFRNSGFAFA TVLIRLALTAPAYFNVLIGIGAVVFAIGITYAYNRFEKPDMADNSLCE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32256; Mature: 32124
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAISRQLVGLYDFLEHLWEHKRTERIIARLLITVFLALLILIELSRQGLLPAQLAALLP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC HSHFYAINVAFSMLLGLEVFGLVFSLASSVSVSVGKQFEILSLILLRHSFKELVHFSEPL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC HWDSSTEAVLHMLSNASGGLVIFVLLGVYYKMQKHRAITCDIEAATHFIASKKVVSLLLL CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHH VLFSIIGVIDGIRYLSGTSLENFFSLFYTILVFSDVLIVLISLRYSSDYPIVFRNSGFAF HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHH ATVLIRLALTAPAYFNVLIGIGAVVFAIGITYAYNRFEKPDMADNSLCE HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TAISRQLVGLYDFLEHLWEHKRTERIIARLLITVFLALLILIELSRQGLLPAQLAALLP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC HSHFYAINVAFSMLLGLEVFGLVFSLASSVSVSVGKQFEILSLILLRHSFKELVHFSEPL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC HWDSSTEAVLHMLSNASGGLVIFVLLGVYYKMQKHRAITCDIEAATHFIASKKVVSLLLL CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHH VLFSIIGVIDGIRYLSGTSLENFFSLFYTILVFSDVLIVLISLRYSSDYPIVFRNSGFAF HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHH ATVLIRLALTAPAYFNVLIGIGAVVFAIGITYAYNRFEKPDMADNSLCE HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA