| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is yaeT [H]
Identifier: 193213407
GI number: 193213407
Start: 1938176
End: 1940698
Strand: Direct
Name: yaeT [H]
Synonym: Cpar_1768
Alternate gene names: 193213407
Gene position: 1938176-1940698 (Clockwise)
Preceding gene: 193213406
Following gene: 193213413
Centisome position: 84.66
GC content: 54.26
Gene sequence:
>2523_bases ATGAATACAACACCCTTTTCGCCAGACAAGCTCTCAGCACTTCTGATTGGCCTGGCACTGCTTAACGGTCCGATATCGAC CGCTTATGCGAAAACCGCAGCAACAAACGCTTCCCCGGCCTCCGAAGCTGCTACCGGCACTCCGGCCTCTTCGCAATCCG CGAAGCTGCGTACAGTGACCGTCCGTCAGATTTCGTTCAGCGGGCTGCAAACCATCAAGGAGTCGGAACTGCTCAAAAGC CTGCCCATCAAGGCCGGAGAACAGATCACCATTCCAGGGCAGCAGATTCCCGGCTTGCTGCAGTACCTCTGGAATCTCCA GTACTTCAGCAACATCGAAATCGGGCAAACCGAGCTTGGTGGCGACAACATCGGGCTGACCTTCAGAGTCACCGAATTTC CGATTCTGGAAAGCATCGAGTTCCAGGGCAACGACAAATACAAGGACAAGGAGCTGCTCAAAACCACGGGCCTTGTCGTC GGTCGCAGAATAAGCCAGCAGGAGCTGCTCAACGCGTCCAACAAGATTGAAAAACAGTACGCAGCCAAAGGCTACCTGAC CGCCGGTGTAGAGTACCGCGTGGAAAACACCGGAGACAACCGGGCCAAGGCAATCTTTACCGTCCACGAAGGCTCGAAAG TGGTAATCGAAAAAATACGGTTCCACGGCAACAAAGCCTTCAAGGAGGGAAAACTCCGCGATGTGCTCAAGGAGACCTCA CAAAACTCCTGGTGGAGAAAAATCTTCGGTCAGCCGAAGCTCGACAAAGACAAGTTTGAAGAAGACAAGAACCTGCTGGT CGATTTCTATCGTAACAACGGCTACCGCGATGCGCGCATCGTCAAGGACACCCTCACCTATACCAAGGATAACAAAGGGG TCAACATCGATATTTACGTCGAAGAGGGGCCGAAGTATCAGATCGGCAGCATCACCTGGATCGGCAACACCAAGGATTTT GCAACAACCGGTATCCTTGACGAGACATTCGGCATTAAGCAGGGTGACCTGTACAGCGCCAAAAAGATCAACGAGCGCCT GAACTTCTCCCAGGATCATTCGGATATCGCCTCGCTCTACCTGGACAGAGGCTATCTCTCGTTCAGGGCCCGGCTTGAAG AACAGGTCGTGCAACCAAATACGGTCAATCTGGTCATCACGCTGACCGAGGGCGATCCGTTCACCCTGAACCTCATCAAT GTCAAGGGTAATACCAAAACGAAGGATCACGTCATTCGCCGCGAGCTTTACACGGTACCTGGCGATACCTTCAGCCGAAA GAAAGTGGTGAGAAGCATCAGGGAGCTTTCGATGCTGAACTACTTCGACCCCGAAACCCTGACGCCAGACATTGACCCGA ATCAGCGCGACAACACGGTCGATGTAACCTACAACATCACCGAACGCCAGACCGATACCTTCAATGCGGCCGTCGGTTAC AGCGCGTCGAGCGGTGGCACGGGCTCTCTCGGCTTAACGTTCAATAACTTCTCGCTCGGCGACATCTTCAACCCTTCGGC ATACCGGCCGCTGCCTCACGGCGATGGTCAGAAGCTTTCGATGCAATGGCAGTTCGGCACCAACAACTACCGGACGCTCT CCCTTTCGGTCAGCGATCCCTGGGCCTTCGGTACCCATACCTCTGTAGGGCTCAGCGCATTCAAAACCAAGCAGACCTAT GACCTGAACAGCAGCAACGAAGTCACCGATAACAAAACCATCAAGCAGTATGGTGCAAACCTCTCCATCGGGCGCAGACT GACCTGGCCGGATGACTATTTCACCATCAGCTGGCGTATTGGTTACCTGCACACGGAAGGCGGCTTCGTGAGCTTCCTGA ACGAAACCAACGTGCCCGAAACGGCCGAGGAGTATTCGATCACCCAAACCATCACCCGCAACAGCGTCGATAACCCGATC TATCCCAGGCACGGCAGTAAGAATACCTTCACTGCCCAGCTGGCCGGTGGATTCCTGCCTGGCACGATCGACTTCTACAA ACTGATCGGAACAACAAGCTGGTACCTGCCGGTATCGAAGGATCTGGTTCTGAATCTTTCGGCGCAACAAGGCTATCTGG ACACCTTCAGCGACAAGGACTATATTCCTTACACCAGCTATTTCTACATGGGTGGAAGCGGCATGTCCTCGCTGCCAACC GTACCTCTTCGAGGCTACCCCGACCAGTCCCTCGGCGGACTGTTCTCGGGTGAAGACAACCTGTACGGCGGTAAGGTCTA TACCAAAATCACCACTGAGCTGCGCTATCCGCTCACCCTGAGCCCATCGGCAAGCATCTATGGCCTGGTCTTCTTTGAAG CTGGCAATCTATGGGCCGACTCCGGTTCGGTGGATCTGACCGATCTGAAAAAATCGGCCGGTATCGGACTGCGGCTGTAC CTGCCGATTATCGGCCAGGTCGGTATTGATTACGGCTATGGATTCGACTCCGCGCCTTCCGAGCCCGACAAAAATTCGCA GGGCTGGAACTTCACCTTCACCTTCGGACAACCGAACAACTGA
Upstream 100 bases:
>100_bases GTATCAGAACCGGGAAAGGCGCTTTGGCCAGACAAGCGAACAACTCAAAGCCGAAACCTTGAGAAAACAGGCCTAACTCA CCGAATCATTCAGGTTTTTC
Downstream 100 bases:
>100_bases GTTTTCGACCAGCCGAAACAACAAAGGGTGACCATTTGGTCACCCTTTTCATTTTCTCACCGATCATCGATTATCACTCC TCTTCATCATCCGGCTCTTT
Product: outer membrane protein assembly complex protein YaeT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 840; Mature: 840
Protein sequence:
>840_residues MNTTPFSPDKLSALLIGLALLNGPISTAYAKTAATNASPASEAATGTPASSQSAKLRTVTVRQISFSGLQTIKESELLKS LPIKAGEQITIPGQQIPGLLQYLWNLQYFSNIEIGQTELGGDNIGLTFRVTEFPILESIEFQGNDKYKDKELLKTTGLVV GRRISQQELLNASNKIEKQYAAKGYLTAGVEYRVENTGDNRAKAIFTVHEGSKVVIEKIRFHGNKAFKEGKLRDVLKETS QNSWWRKIFGQPKLDKDKFEEDKNLLVDFYRNNGYRDARIVKDTLTYTKDNKGVNIDIYVEEGPKYQIGSITWIGNTKDF ATTGILDETFGIKQGDLYSAKKINERLNFSQDHSDIASLYLDRGYLSFRARLEEQVVQPNTVNLVITLTEGDPFTLNLIN VKGNTKTKDHVIRRELYTVPGDTFSRKKVVRSIRELSMLNYFDPETLTPDIDPNQRDNTVDVTYNITERQTDTFNAAVGY SASSGGTGSLGLTFNNFSLGDIFNPSAYRPLPHGDGQKLSMQWQFGTNNYRTLSLSVSDPWAFGTHTSVGLSAFKTKQTY DLNSSNEVTDNKTIKQYGANLSIGRRLTWPDDYFTISWRIGYLHTEGGFVSFLNETNVPETAEEYSITQTITRNSVDNPI YPRHGSKNTFTAQLAGGFLPGTIDFYKLIGTTSWYLPVSKDLVLNLSAQQGYLDTFSDKDYIPYTSYFYMGGSGMSSLPT VPLRGYPDQSLGGLFSGEDNLYGGKVYTKITTELRYPLTLSPSASIYGLVFFEAGNLWADSGSVDLTDLKKSAGIGLRLY LPIIGQVGIDYGYGFDSAPSEPDKNSQGWNFTFTFGQPNN
Sequences:
>Translated_840_residues MNTTPFSPDKLSALLIGLALLNGPISTAYAKTAATNASPASEAATGTPASSQSAKLRTVTVRQISFSGLQTIKESELLKS LPIKAGEQITIPGQQIPGLLQYLWNLQYFSNIEIGQTELGGDNIGLTFRVTEFPILESIEFQGNDKYKDKELLKTTGLVV GRRISQQELLNASNKIEKQYAAKGYLTAGVEYRVENTGDNRAKAIFTVHEGSKVVIEKIRFHGNKAFKEGKLRDVLKETS QNSWWRKIFGQPKLDKDKFEEDKNLLVDFYRNNGYRDARIVKDTLTYTKDNKGVNIDIYVEEGPKYQIGSITWIGNTKDF ATTGILDETFGIKQGDLYSAKKINERLNFSQDHSDIASLYLDRGYLSFRARLEEQVVQPNTVNLVITLTEGDPFTLNLIN VKGNTKTKDHVIRRELYTVPGDTFSRKKVVRSIRELSMLNYFDPETLTPDIDPNQRDNTVDVTYNITERQTDTFNAAVGY SASSGGTGSLGLTFNNFSLGDIFNPSAYRPLPHGDGQKLSMQWQFGTNNYRTLSLSVSDPWAFGTHTSVGLSAFKTKQTY DLNSSNEVTDNKTIKQYGANLSIGRRLTWPDDYFTISWRIGYLHTEGGFVSFLNETNVPETAEEYSITQTITRNSVDNPI YPRHGSKNTFTAQLAGGFLPGTIDFYKLIGTTSWYLPVSKDLVLNLSAQQGYLDTFSDKDYIPYTSYFYMGGSGMSSLPT VPLRGYPDQSLGGLFSGEDNLYGGKVYTKITTELRYPLTLSPSASIYGLVFFEAGNLWADSGSVDLTDLKKSAGIGLRLY LPIIGQVGIDYGYGFDSAPSEPDKNSQGWNFTFTFGQPNN >Mature_840_residues MNTTPFSPDKLSALLIGLALLNGPISTAYAKTAATNASPASEAATGTPASSQSAKLRTVTVRQISFSGLQTIKESELLKS LPIKAGEQITIPGQQIPGLLQYLWNLQYFSNIEIGQTELGGDNIGLTFRVTEFPILESIEFQGNDKYKDKELLKTTGLVV GRRISQQELLNASNKIEKQYAAKGYLTAGVEYRVENTGDNRAKAIFTVHEGSKVVIEKIRFHGNKAFKEGKLRDVLKETS QNSWWRKIFGQPKLDKDKFEEDKNLLVDFYRNNGYRDARIVKDTLTYTKDNKGVNIDIYVEEGPKYQIGSITWIGNTKDF ATTGILDETFGIKQGDLYSAKKINERLNFSQDHSDIASLYLDRGYLSFRARLEEQVVQPNTVNLVITLTEGDPFTLNLIN VKGNTKTKDHVIRRELYTVPGDTFSRKKVVRSIRELSMLNYFDPETLTPDIDPNQRDNTVDVTYNITERQTDTFNAAVGY SASSGGTGSLGLTFNNFSLGDIFNPSAYRPLPHGDGQKLSMQWQFGTNNYRTLSLSVSDPWAFGTHTSVGLSAFKTKQTY DLNSSNEVTDNKTIKQYGANLSIGRRLTWPDDYFTISWRIGYLHTEGGFVSFLNETNVPETAEEYSITQTITRNSVDNPI YPRHGSKNTFTAQLAGGFLPGTIDFYKLIGTTSWYLPVSKDLVLNLSAQQGYLDTFSDKDYIPYTSYFYMGGSGMSSLPT VPLRGYPDQSLGGLFSGEDNLYGGKVYTKITTELRYPLTLSPSASIYGLVFFEAGNLWADSGSVDLTDLKKSAGIGLRLY LPIIGQVGIDYGYGFDSAPSEPDKNSQGWNFTFTFGQPNN
Specific function: Involved in the assembly of outer membrane proteins. Does not play a direct role in the export of outer membrane lipids [H]
COG id: COG4775
COG function: function code M; Outer membrane protein/protective antigen OMA87
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surface antigen D15 family [H]
Homologues:
Organism=Escherichia coli, GI1786374, Length=805, Percent_Identity=24.7204968944099, Blast_Score=173, Evalue=5e-44,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000184 - InterPro: IPR016474 - InterPro: IPR010827 [H]
Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]
EC number: NA
Molecular weight: Translated: 93470; Mature: 93470
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTTPFSPDKLSALLIGLALLNGPISTAYAKTAATNASPASEAATGTPASSQSAKLRTVT CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEE VRQISFSGLQTIKESELLKSLPIKAGEQITIPGQQIPGLLQYLWNLQYFSNIEIGQTELG EEEEEHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCHHCCCCCCCCEECC GDNIGLTFRVTEFPILESIEFQGNDKYKDKELLKTTGLVVGRRISQQELLNASNKIEKQY CCCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AAKGYLTAGVEYRVENTGDNRAKAIFTVHEGSKVVIEKIRFHGNKAFKEGKLRDVLKETS HHCCEEEECEEEEEECCCCCCEEEEEEEECCCCEEEEHHHHCCCHHHCCCHHHHHHHHHC QNSWWRKIFGQPKLDKDKFEEDKNLLVDFYRNNGYRDARIVKDTLTYTKDNKGVNIDIYV CCCHHHHHCCCCCCCHHHHHCCCCEEEEEEECCCCCCCEEEEEHHHEECCCCCEEEEEEE EEGPKYQIGSITWIGNTKDFATTGILDETFGIKQGDLYSAKKINERLNFSQDHSDIASLY CCCCCEEEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHH LDRGYLSFRARLEEQVVQPNTVNLVITLTEGDPFTLNLINVKGNTKTKDHVIRRELYTVP HCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHEECC GDTFSRKKVVRSIRELSMLNYFDPETLTPDIDPNQRDNTVDVTYNITERQTDTFNAAVGY CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECC SASSGGTGSLGLTFNNFSLGDIFNPSAYRPLPHGDGQKLSMQWQFGTNNYRTLSLSVSDP CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCC WAFGTHTSVGLSAFKTKQTYDLNSSNEVTDNKTIKQYGANLSIGRRLTWPDDYFTISWRI CCCCCCCCCCHHHHCCCEEECCCCCCCCCCCHHHHHHCCCCEECCEECCCCCEEEEEEEE GYLHTEGGFVSFLNETNVPETAEEYSITQTITRNSVDNPIYPRHGSKNTFTAQLAGGFLP EEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCC GTIDFYKLIGTTSWYLPVSKDLVLNLSAQQGYLDTFSDKDYIPYTSYFYMGGSGMSSLPT CHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC VPLRGYPDQSLGGLFSGEDNLYGGKVYTKITTELRYPLTLSPSASIYGLVFFEAGNLWAD CCCCCCCCHHHCCCCCCCCCCCCCEEEEEEEEEEECCEEECCCCCEEEEEEEECCCEEEC SGSVDLTDLKKSAGIGLRLYLPIIGQVGIDYGYGFDSAPSEPDKNSQGWNFTFTFGQPNN CCCEEHHHHHHHCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure MNTTPFSPDKLSALLIGLALLNGPISTAYAKTAATNASPASEAATGTPASSQSAKLRTVT CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEE VRQISFSGLQTIKESELLKSLPIKAGEQITIPGQQIPGLLQYLWNLQYFSNIEIGQTELG EEEEEHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCHHCCCCCCCCEECC GDNIGLTFRVTEFPILESIEFQGNDKYKDKELLKTTGLVVGRRISQQELLNASNKIEKQY CCCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AAKGYLTAGVEYRVENTGDNRAKAIFTVHEGSKVVIEKIRFHGNKAFKEGKLRDVLKETS HHCCEEEECEEEEEECCCCCCEEEEEEEECCCCEEEEHHHHCCCHHHCCCHHHHHHHHHC QNSWWRKIFGQPKLDKDKFEEDKNLLVDFYRNNGYRDARIVKDTLTYTKDNKGVNIDIYV CCCHHHHHCCCCCCCHHHHHCCCCEEEEEEECCCCCCCEEEEEHHHEECCCCCEEEEEEE EEGPKYQIGSITWIGNTKDFATTGILDETFGIKQGDLYSAKKINERLNFSQDHSDIASLY CCCCCEEEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHH LDRGYLSFRARLEEQVVQPNTVNLVITLTEGDPFTLNLINVKGNTKTKDHVIRRELYTVP HCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHEECC GDTFSRKKVVRSIRELSMLNYFDPETLTPDIDPNQRDNTVDVTYNITERQTDTFNAAVGY CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECC SASSGGTGSLGLTFNNFSLGDIFNPSAYRPLPHGDGQKLSMQWQFGTNNYRTLSLSVSDP CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCC WAFGTHTSVGLSAFKTKQTYDLNSSNEVTDNKTIKQYGANLSIGRRLTWPDDYFTISWRI CCCCCCCCCCHHHHCCCEEECCCCCCCCCCCHHHHHHCCCCEECCEECCCCCEEEEEEEE GYLHTEGGFVSFLNETNVPETAEEYSITQTITRNSVDNPIYPRHGSKNTFTAQLAGGFLP EEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCC GTIDFYKLIGTTSWYLPVSKDLVLNLSAQQGYLDTFSDKDYIPYTSYFYMGGSGMSSLPT CHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC VPLRGYPDQSLGGLFSGEDNLYGGKVYTKITTELRYPLTLSPSASIYGLVFFEAGNLWAD CCCCCCCCHHHCCCCCCCCCCCCCEEEEEEEEEEECCEEECCCCCEEEEEEEECCCEEEC SGSVDLTDLKKSAGIGLRLYLPIIGQVGIDYGYGFDSAPSEPDKNSQGWNFTFTFGQPNN CCCEEHHHHHHHCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA