| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is glmM [H]
Identifier: 193213413
GI number: 193213413
Start: 1946196
End: 1947611
Strand: Direct
Name: glmM [H]
Synonym: Cpar_1774
Alternate gene names: 193213413
Gene position: 1946196-1947611 (Clockwise)
Preceding gene: 193213407
Following gene: 193213414
Centisome position: 85.01
GC content: 61.72
Gene sequence:
>1416_bases ATGAGCCTGATGATCAGCGTCTCCGGCATCCGCGGCGTTGTCGGCGCAAGCCTCACTCCGGAAACTCTCACCGACTTCAC GATGGCCTTCGCCACCTGGGTCAGCCGCCGCAAAGCGTTGCAGAACCCGGCATCGGACGCGAAACCCAAAATCGTCATCG GCAGAGACAGCCGACCGACTGGCGGCATCATCACCCAGCTCGTTTCGAGCACGCTCAACCTCTGTGGCTGCGACGTGATC GATGTCGGCATGACCACCACGCCGACGGTCGAACTCGCCACGGCGGGCGAAGAGGCCGACGGCGGGCTGATCGTCACCGC ATCGCACAACCCGGTCGAGTGGAACGCGCTGAAAATGCTCGACGAAAAGGGCGAGTTCCTGACCGCCAGCGACGTCGAGG AACTGCTCGTCATTCTGAATGAGAAAAACAAAGAATCCGCCCGCTGGGACGGTCTCGGCTCCATGATAGCGAACGGCTCG TGGGATAAAAAACATATCGACCGGATTCTGAAGCTCGACTGCATCGACCGCGACCTGATTTCGAGCATGAAGTTCCGAGT GCTGGTGGACGCGGTCGAGGGCGCAGGCTCGTTTATCGTGCCGGAACTGTGCCGCCAGCTCGGCATCGCGGAGGTCAAGA CGCTCGCCTGCCTCGGCACCGGCATCTTTCCGCGCAACCCCGAACCGGTCGAAGAGAACCTCCGCGAAACGATGGACATC CTCTCGAAAGAGAGTTGCGATCTGGGTATCATCGTCGATCCCGACGCCGACCGGCTGGCGCTGATCTGCGAGGACGGCAT GCTCTTCGGCGAGGAATACACGCTGGTGGCCTGCGCGGACTTCTACCTCAAGCACCACAACGGGCCGGTGGTCAATAATC TTTCGAGCAGCCGCGCTTTGCAGGACATCGCCGAAAAGCACGAAGTCGAGTGCTACAGCGCGAAGGTCGGCGAAGCCAAC GTGACCGAGGTGATGAAGGGCTGCAACGCGGTGATCGGCGGTGAAGGCAACGGCGGGGTGATCCTGCCGGAGCTGCACTA CGGCCGCGACGCACTTGCGGGCATCGCGCTCTTCATCCAGGCTTTCGCCGAGTGGAAAGCAGTGACCGACGGCACGCTCT CGGAGTTCCGGAAGACCTTCCCGAATTACGTAATGTCAAAGCAGAAGGTCAAGCTCGACGGCATGACCAAAGAGTCACTC GCCGCGCTGTTCGACGCCATCGCGGCGCGCCATCCGGAGGCATCGATCAACCGGCTCGACGGCATCAAACTCGACTTCCC GGAAGGCTGGGTACACCTGCGCCCCTCCAACACCGAGCCGATCGTGCGCATCTACACCGAAGCCGCGACCAAAGCCGAGG CCGACGCGCTGGCCGCGAGGTTCATCGATGAAATCAACCAATCGACCATCGCCTGA
Upstream 100 bases:
>100_bases GAAAATCTTGTTCATCCTGACCGCTTTGCACCCCGGCTTCGGTGGATTTTACTATATTCCCGCAACACGACGGCATTCGA ACATTCCAACCTCTGCCTCC
Downstream 100 bases:
>100_bases ACGATATGCGCGGCACGGCAAACACAGCATCGGGATTCCGCACGCAGCAGGACGAAACTCTTGGCAAACGCAAGAAAGGG TCGGTCGATCGCTATATCAT
Product: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 471; Mature: 470
Protein sequence:
>471_residues MSLMISVSGIRGVVGASLTPETLTDFTMAFATWVSRRKALQNPASDAKPKIVIGRDSRPTGGIITQLVSSTLNLCGCDVI DVGMTTTPTVELATAGEEADGGLIVTASHNPVEWNALKMLDEKGEFLTASDVEELLVILNEKNKESARWDGLGSMIANGS WDKKHIDRILKLDCIDRDLISSMKFRVLVDAVEGAGSFIVPELCRQLGIAEVKTLACLGTGIFPRNPEPVEENLRETMDI LSKESCDLGIIVDPDADRLALICEDGMLFGEEYTLVACADFYLKHHNGPVVNNLSSSRALQDIAEKHEVECYSAKVGEAN VTEVMKGCNAVIGGEGNGGVILPELHYGRDALAGIALFIQAFAEWKAVTDGTLSEFRKTFPNYVMSKQKVKLDGMTKESL AALFDAIAARHPEASINRLDGIKLDFPEGWVHLRPSNTEPIVRIYTEAATKAEADALAARFIDEINQSTIA
Sequences:
>Translated_471_residues MSLMISVSGIRGVVGASLTPETLTDFTMAFATWVSRRKALQNPASDAKPKIVIGRDSRPTGGIITQLVSSTLNLCGCDVI DVGMTTTPTVELATAGEEADGGLIVTASHNPVEWNALKMLDEKGEFLTASDVEELLVILNEKNKESARWDGLGSMIANGS WDKKHIDRILKLDCIDRDLISSMKFRVLVDAVEGAGSFIVPELCRQLGIAEVKTLACLGTGIFPRNPEPVEENLRETMDI LSKESCDLGIIVDPDADRLALICEDGMLFGEEYTLVACADFYLKHHNGPVVNNLSSSRALQDIAEKHEVECYSAKVGEAN VTEVMKGCNAVIGGEGNGGVILPELHYGRDALAGIALFIQAFAEWKAVTDGTLSEFRKTFPNYVMSKQKVKLDGMTKESL AALFDAIAARHPEASINRLDGIKLDFPEGWVHLRPSNTEPIVRIYTEAATKAEADALAARFIDEINQSTIA >Mature_470_residues SLMISVSGIRGVVGASLTPETLTDFTMAFATWVSRRKALQNPASDAKPKIVIGRDSRPTGGIITQLVSSTLNLCGCDVID VGMTTTPTVELATAGEEADGGLIVTASHNPVEWNALKMLDEKGEFLTASDVEELLVILNEKNKESARWDGLGSMIANGSW DKKHIDRILKLDCIDRDLISSMKFRVLVDAVEGAGSFIVPELCRQLGIAEVKTLACLGTGIFPRNPEPVEENLRETMDIL SKESCDLGIIVDPDADRLALICEDGMLFGEEYTLVACADFYLKHHNGPVVNNLSSSRALQDIAEKHEVECYSAKVGEANV TEVMKGCNAVIGGEGNGGVILPELHYGRDALAGIALFIQAFAEWKAVTDGTLSEFRKTFPNYVMSKQKVKLDGMTKESLA ALFDAIAARHPEASINRLDGIKLDFPEGWVHLRPSNTEPIVRIYTEAATKAEADALAARFIDEINQSTIA
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1789566, Length=468, Percent_Identity=27.7777777777778, Blast_Score=96, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 51028; Mature: 50897
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLMISVSGIRGVVGASLTPETLTDFTMAFATWVSRRKALQNPASDAKPKIVIGRDSRPT CEEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCC GGIITQLVSSTLNLCGCDVIDVGMTTTPTVELATAGEEADGGLIVTASHNPVEWNALKML CHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCCCHHHHHHH DEKGEFLTASDVEELLVILNEKNKESARWDGLGSMIANGSWDKKHIDRILKLDCIDRDLI HCCCCEECCCCHHHHHHHHCCCCCCCHHHCCHHHHHCCCCCCHHHHHHHHHHHHCCHHHH SSMKFRVLVDAVEGAGSFIVPELCRQLGIAEVKTLACLGTGIFPRNPEPVEENLRETMDI HHHHHHHEEEHHHCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH LSKESCDLGIIVDPDADRLALICEDGMLFGEEYTLVACADFYLKHHNGPVVNNLSSSRAL HHCCCCCEEEEECCCCCCEEEEECCCEEECCCEEEEEHHHHHHHHCCCCCCCCCHHHHHH QDIAEKHEVECYSAKVGEANVTEVMKGCNAVIGGEGNGGVILPELHYGRDALAGIALFIQ HHHHHHHCCEEEECCCCCCHHHHHHHCCCEEECCCCCCCEEECCCCCCHHHHHHHHHHHH AFAEWKAVTDGTLSEFRKTFPNYVMSKQKVKLDGMTKESLAALFDAIAARHPEASINRLD HHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHCC GIKLDFPEGWVHLRPSNTEPIVRIYTEAATKAEADALAARFIDEINQSTIA CCEEECCCCEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLMISVSGIRGVVGASLTPETLTDFTMAFATWVSRRKALQNPASDAKPKIVIGRDSRPT EEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCC GGIITQLVSSTLNLCGCDVIDVGMTTTPTVELATAGEEADGGLIVTASHNPVEWNALKML CHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCCCHHHHHHH DEKGEFLTASDVEELLVILNEKNKESARWDGLGSMIANGSWDKKHIDRILKLDCIDRDLI HCCCCEECCCCHHHHHHHHCCCCCCCHHHCCHHHHHCCCCCCHHHHHHHHHHHHCCHHHH SSMKFRVLVDAVEGAGSFIVPELCRQLGIAEVKTLACLGTGIFPRNPEPVEENLRETMDI HHHHHHHEEEHHHCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH LSKESCDLGIIVDPDADRLALICEDGMLFGEEYTLVACADFYLKHHNGPVVNNLSSSRAL HHCCCCCEEEEECCCCCCEEEEECCCEEECCCEEEEEHHHHHHHHCCCCCCCCCHHHHHH QDIAEKHEVECYSAKVGEANVTEVMKGCNAVIGGEGNGGVILPELHYGRDALAGIALFIQ HHHHHHHCCEEEECCCCCCHHHHHHHCCCEEECCCCCCCEEECCCCCCHHHHHHHHHHHH AFAEWKAVTDGTLSEFRKTFPNYVMSKQKVKLDGMTKESLAALFDAIAARHPEASINRLD HHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHHCC GIKLDFPEGWVHLRPSNTEPIVRIYTEAATKAEADALAARFIDEINQSTIA CCEEECCCCEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11930014 [H]