Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
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Accession | NC_011027 |
Length | 2,289,249 |
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The map label for this gene is 193213140
Identifier: 193213140
GI number: 193213140
Start: 1637590
End: 1638597
Strand: Direct
Name: 193213140
Synonym: Cpar_1495
Alternate gene names: NA
Gene position: 1637590-1638597 (Clockwise)
Preceding gene: 193213139
Following gene: 193213142
Centisome position: 71.53
GC content: 53.37
Gene sequence:
>1008_bases ATGAAGCGCCATCTGATTTCCTGGTTGAGGCTTTCGGCCTCATTCATCTTCCTGCTTCTGGCAGCCATAGCTGTCAACCA GCTTTACAGCCTGTCGATGCTGCTCGAAAAGCTTCTCCCCTTTTCGGGCTACGCTTTCCTTGCGCTCTGGGCTATTTTTT TCATCATCACAGCCGTCACCGGCTACCGACTCTGGAAAGCGCCGAAGATTCCGCCGCTGGCAGACAGGGAGGGCGGCAAG CATTTTGACGACTATATCGCCTACCTCTCCAGGGCACTCAGGGTGCATACCACAATGCCGGAAGACAGCAGAAAAAGTGG CGATCTGCGTTGGGTTAAAACCAACCTCAAATTGCATGAGGTCGATGCGCTGAACCACACCAAGACCGTCGCCACCAAGA ATTTCTTCATCGGCGCCTTTGCCCAGAACACCTCGTACGGCACCACAACATCGCTGATGAACAACATCAAGCTGATCTGG CATATTTATTCCAGCTACTACCACCATCAATCGGCCAGAGAGTTCGTGCAGCTACTCAAATCGGTTTACGAATGCCTGCC GCTGTCGGACTTCAACAAGGATGAACTTCCGGCCCACATCAAGCCGATCATCCAGTGCTCGTTCAGCAACACGCTCTCTT CGCTCTTACCGGGAGGAAACCTGCTGACCCCGTTTTTCCTCAACCTGTTTCTGGCGGGCGCAACCAACACCTATCTGACC TGCCTGGCCGGTATCATCACCTCGAAGCACTGCCAGATGCTGTCGCTTGAAGACAAGCAGGAAATCATTCAGCAGAGCAT GTTCGAGGCATCCTTCATGGTCAAGGAGATTGTCAAGGAGTGCAACCCGATTCTGTCGGTTACGATCAGCAATGCCGTCA AGAAGGCCGGGATCGAAAGCCTTGACACCGTCACAGCCCCATCAACAGGCAGCAGCGTGGCCCAGGACATCGTCTCCCAC CTGGCCAGCTCGTTGAAACATATTATCAGAGAAACCGGGAATGAGTAA
Upstream 100 bases:
>100_bases CGGAAGATCGGATAGCTTACTTTGTATGAAAGATGTAACAGGGTGAACAATTTGCCCGTTACGAAATAGCATTTCGGTCA GAAACCACCTTCCTGCCGAC
Downstream 100 bases:
>100_bases ATACTAGCGGTCGCGATCAATATCAATGAAAGAGAGCACACAAAAGCACAGAGCTCTTGAATGAAACTGAATTAACGCCC CGTATTCCCCTCCTCTTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MKRHLISWLRLSASFIFLLLAAIAVNQLYSLSMLLEKLLPFSGYAFLALWAIFFIITAVTGYRLWKAPKIPPLADREGGK HFDDYIAYLSRALRVHTTMPEDSRKSGDLRWVKTNLKLHEVDALNHTKTVATKNFFIGAFAQNTSYGTTTSLMNNIKLIW HIYSSYYHHQSAREFVQLLKSVYECLPLSDFNKDELPAHIKPIIQCSFSNTLSSLLPGGNLLTPFFLNLFLAGATNTYLT CLAGIITSKHCQMLSLEDKQEIIQQSMFEASFMVKEIVKECNPILSVTISNAVKKAGIESLDTVTAPSTGSSVAQDIVSH LASSLKHIIRETGNE
Sequences:
>Translated_335_residues MKRHLISWLRLSASFIFLLLAAIAVNQLYSLSMLLEKLLPFSGYAFLALWAIFFIITAVTGYRLWKAPKIPPLADREGGK HFDDYIAYLSRALRVHTTMPEDSRKSGDLRWVKTNLKLHEVDALNHTKTVATKNFFIGAFAQNTSYGTTTSLMNNIKLIW HIYSSYYHHQSAREFVQLLKSVYECLPLSDFNKDELPAHIKPIIQCSFSNTLSSLLPGGNLLTPFFLNLFLAGATNTYLT CLAGIITSKHCQMLSLEDKQEIIQQSMFEASFMVKEIVKECNPILSVTISNAVKKAGIESLDTVTAPSTGSSVAQDIVSH LASSLKHIIRETGNE >Mature_335_residues MKRHLISWLRLSASFIFLLLAAIAVNQLYSLSMLLEKLLPFSGYAFLALWAIFFIITAVTGYRLWKAPKIPPLADREGGK HFDDYIAYLSRALRVHTTMPEDSRKSGDLRWVKTNLKLHEVDALNHTKTVATKNFFIGAFAQNTSYGTTTSLMNNIKLIW HIYSSYYHHQSAREFVQLLKSVYECLPLSDFNKDELPAHIKPIIQCSFSNTLSSLLPGGNLLTPFFLNLFLAGATNTYLT CLAGIITSKHCQMLSLEDKQEIIQQSMFEASFMVKEIVKECNPILSVTISNAVKKAGIESLDTVTAPSTGSSVAQDIVSH LASSLKHIIRETGNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37526; Mature: 37526
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRHLISWLRLSASFIFLLLAAIAVNQLYSLSMLLEKLLPFSGYAFLALWAIFFIITAVT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH GYRLWKAPKIPPLADREGGKHFDDYIAYLSRALRVHTTMPEDSRKSGDLRWVKTNLKLHE HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCEEEE VDALNHTKTVATKNFFIGAFAQNTSYGTTTSLMNNIKLIWHIYSSYYHHQSAREFVQLLK HHHHCCHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVYECLPLSDFNKDELPAHIKPIIQCSFSNTLSSLLPGGNLLTPFFLNLFLAGATNTYLT HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHH CLAGIITSKHCQMLSLEDKQEIIQQSMFEASFMVKEIVKECNPILSVTISNAVKKAGIES HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHH LDTVTAPSTGSSVAQDIVSHLASSLKHIIRETGNE HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKRHLISWLRLSASFIFLLLAAIAVNQLYSLSMLLEKLLPFSGYAFLALWAIFFIITAVT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH GYRLWKAPKIPPLADREGGKHFDDYIAYLSRALRVHTTMPEDSRKSGDLRWVKTNLKLHE HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCEEEE VDALNHTKTVATKNFFIGAFAQNTSYGTTTSLMNNIKLIWHIYSSYYHHQSAREFVQLLK HHHHCCHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVYECLPLSDFNKDELPAHIKPIIQCSFSNTLSSLLPGGNLLTPFFLNLFLAGATNTYLT HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHH CLAGIITSKHCQMLSLEDKQEIIQQSMFEASFMVKEIVKECNPILSVTISNAVKKAGIES HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHH LDTVTAPSTGSSVAQDIVSHLASSLKHIIRETGNE HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA