Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
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Accession | NC_011027 |
Length | 2,289,249 |
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The map label for this gene is 193213139
Identifier: 193213139
GI number: 193213139
Start: 1636206
End: 1637468
Strand: Direct
Name: 193213139
Synonym: Cpar_1494
Alternate gene names: NA
Gene position: 1636206-1637468 (Clockwise)
Preceding gene: 193213132
Following gene: 193213140
Centisome position: 71.47
GC content: 57.09
Gene sequence:
>1263_bases ATGAACGTCAACAATTTCAGATTTACGCTCGGCGGAAAAGAGTTTGTCCCTATCGTGATCGGCGGCATGGGAGTCAACAT CTCGACTTCGGAGCTTGCACTCTCGGCAGAACGGCTGGGCGGTATCGGCCATATTTCCGATGCCGAGGTCATGCAGGTTT GTGATCAGATTTTCGGAACCACCTACACCAGCGACAAACGCCAGAGGTACGCCTCGAACTTCAATAATCCGGACAAATCG AGCGTGCAGTTCGATCTGGAGCAGCTCGCCGAAGCGCAGAAGCGCTTCGTTGACTACACCATGAGCCGGAAAACGGGCAA TGGGGCGATCTTCATGAACTGCATGGAGAAGCTCACGATGAACAACTCCGCTGCGACGCTCAAGGTGCGCCTGGAGGCTG CCCTGAACGCAGGCATCGACGGCATCACGCTCGCCGCCGGCCTGAACCTCAGAACCCTCGATCTTATCAGCGATCACGAA CGGTTCCGTGACGTCAAGCTCGGAATCATCATCTCTTCGGTGCGGGCACTCTCGATTTTCCTGAAACGAGCCATCCGGCT TGAGCGGCTGCCGGACTATATTGTGGTCGAAGGGCCTCTTGCGGGTGGCCATCTCGGCTTCAGCCTGGACGACTGGCAGT CACAGAGTCTGCAAACCATCGTTGCTGAAACGATCGCCTTCCTGAAAAAAGAGAATCTCGATATTCCGGTCATTCCGGCA GGCGGCATCTTCACCGGTACCGACGCGGTGGAGTACCTGCAGATGGGCGCTTCGGCTGTTCAGGTGGCCACACGGTTCAC CATCGCGCAGGAATCGGGACTTCCGGACAAGGTCAAACAGCACTATATCAATGCCCAGCCGGAAGATGTCGAGGTCAACA CCGCTTCCACGACCGGCTACCCGATGCGCATGCTCAAGCAGTCACCCACGCTTCAGTACGGCATAAAGCCCAACTGCGAG GGACTCGGCTACCTGCTCGACAACTCGGGTAAATGCCCCTACATCGACGACTACTACCAGGCGCTCGAATCTAGAGACCC TGCCGAGGGCCGTTTCGTCGTCAAAAACCACACATGCCTCTGCACCGGTATGGCGCGCTATGACTGCTGGACCTGCGGGC AAACGGTCTCGCGCCTGAAAGAGACCACCAACCGCCTGCCCGATGGCACCTGGCAACTGCCCACAGCCGAGGAGATTTTC AACGATTACCTCCTGAGCGAAAACCACTCCATCAGCAAACCGGCTATCGAAAAGGAGCAGTGA
Upstream 100 bases:
>100_bases TCCATGGCACCGGCAAAGGCTGCCCATCGAATGACGGAACCAATCAGCGGTGCCCTCCGGGCAGTACCTCAGTAATCAGC ACGTATCGTATCTGAACACC
Downstream 100 bases:
>100_bases AAGCAGGAAGTATTTTTGCCTCGGAAGATCGGATAGCTTACTTTGTATGAAAGATGTAACAGGGTGAACAATTTGCCCGT TACGAAATAGCATTTCGGTC
Product: 2-nitropropane dioxygenase NPD
Products: NA
Alternate protein names: 2-Nitropropane Dioxygenase; Oxidoreductase 2-Nitropropane Dioxygenase Family; 2-Nitropropane Dioxygenase Family Oxidoreductase; Dioxygenase Related 2-Nitropropane Dioxygenase; Oxidoreductase; Enoyl-(Acyl-Carrier-Protein) Reductase II; Oxidoreductase 2-Nitropropane Dioxygenase Family Protein; 2-Nitropropane Dioxygenase Npd; 2-Nitropropane Dioxygenase-Like Protein; Trans-2-Enoyl-ACP Reductase; Dioxygenases Related 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family; Flavin-Containing Oxidoreductase; Trans-2-Enoyl-ACP Reductase II; Enoyl-ACP Reductase; Enoyl-[Acyl-Carrier Protein] Reductase; Dioxygenase; 2-Nitropropane Dioxygenase-Like Dioxygenase
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MNVNNFRFTLGGKEFVPIVIGGMGVNISTSELALSAERLGGIGHISDAEVMQVCDQIFGTTYTSDKRQRYASNFNNPDKS SVQFDLEQLAEAQKRFVDYTMSRKTGNGAIFMNCMEKLTMNNSAATLKVRLEAALNAGIDGITLAAGLNLRTLDLISDHE RFRDVKLGIIISSVRALSIFLKRAIRLERLPDYIVVEGPLAGGHLGFSLDDWQSQSLQTIVAETIAFLKKENLDIPVIPA GGIFTGTDAVEYLQMGASAVQVATRFTIAQESGLPDKVKQHYINAQPEDVEVNTASTTGYPMRMLKQSPTLQYGIKPNCE GLGYLLDNSGKCPYIDDYYQALESRDPAEGRFVVKNHTCLCTGMARYDCWTCGQTVSRLKETTNRLPDGTWQLPTAEEIF NDYLLSENHSISKPAIEKEQ
Sequences:
>Translated_420_residues MNVNNFRFTLGGKEFVPIVIGGMGVNISTSELALSAERLGGIGHISDAEVMQVCDQIFGTTYTSDKRQRYASNFNNPDKS SVQFDLEQLAEAQKRFVDYTMSRKTGNGAIFMNCMEKLTMNNSAATLKVRLEAALNAGIDGITLAAGLNLRTLDLISDHE RFRDVKLGIIISSVRALSIFLKRAIRLERLPDYIVVEGPLAGGHLGFSLDDWQSQSLQTIVAETIAFLKKENLDIPVIPA GGIFTGTDAVEYLQMGASAVQVATRFTIAQESGLPDKVKQHYINAQPEDVEVNTASTTGYPMRMLKQSPTLQYGIKPNCE GLGYLLDNSGKCPYIDDYYQALESRDPAEGRFVVKNHTCLCTGMARYDCWTCGQTVSRLKETTNRLPDGTWQLPTAEEIF NDYLLSENHSISKPAIEKEQ >Mature_420_residues MNVNNFRFTLGGKEFVPIVIGGMGVNISTSELALSAERLGGIGHISDAEVMQVCDQIFGTTYTSDKRQRYASNFNNPDKS SVQFDLEQLAEAQKRFVDYTMSRKTGNGAIFMNCMEKLTMNNSAATLKVRLEAALNAGIDGITLAAGLNLRTLDLISDHE RFRDVKLGIIISSVRALSIFLKRAIRLERLPDYIVVEGPLAGGHLGFSLDDWQSQSLQTIVAETIAFLKKENLDIPVIPA GGIFTGTDAVEYLQMGASAVQVATRFTIAQESGLPDKVKQHYINAQPEDVEVNTASTTGYPMRMLKQSPTLQYGIKPNCE GLGYLLDNSGKCPYIDDYYQALESRDPAEGRFVVKNHTCLCTGMARYDCWTCGQTVSRLKETTNRLPDGTWQLPTAEEIF NDYLLSENHSISKPAIEKEQ
Specific function: Unknown
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46411; Mature: 46411
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVNNFRFTLGGKEFVPIVIGGMGVNISTSELALSAERLGGIGHISDAEVMQVCDQIFGT CCCCCEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC TYTSDKRQRYASNFNNPDKSSVQFDLEQLAEAQKRFVDYTMSRKTGNGAIFMNCMEKLTM CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHC NNSAATLKVRLEAALNAGIDGITLAAGLNLRTLDLISDHERFRDVKLGIIISSVRALSIF CCCCEEEEEEEEEHHHCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH LKRAIRLERLPDYIVVEGPLAGGHLGFSLDDWQSQSLQTIVAETIAFLKKENLDIPVIPA HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECC GGIFTGTDAVEYLQMGASAVQVATRFTIAQESGLPDKVKQHYINAQPEDVEVNTASTTGY CCCCCCHHHHHHHHHCHHHHHHHHHHEEHHCCCCHHHHHHHHCCCCCCCEEEEECCCCCC PMRMLKQSPTLQYGIKPNCEGLGYLLDNSGKCPYIDDYYQALESRDPAEGRFVVKNHTCL HHHHHHCCCCEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEECCEEE CTGMARYDCWTCGQTVSRLKETTNRLPDGTWQLPTAEEIFNDYLLSENHSISKPAIEKEQ EECCHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MNVNNFRFTLGGKEFVPIVIGGMGVNISTSELALSAERLGGIGHISDAEVMQVCDQIFGT CCCCCEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC TYTSDKRQRYASNFNNPDKSSVQFDLEQLAEAQKRFVDYTMSRKTGNGAIFMNCMEKLTM CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHC NNSAATLKVRLEAALNAGIDGITLAAGLNLRTLDLISDHERFRDVKLGIIISSVRALSIF CCCCEEEEEEEEEHHHCCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH LKRAIRLERLPDYIVVEGPLAGGHLGFSLDDWQSQSLQTIVAETIAFLKKENLDIPVIPA HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECC GGIFTGTDAVEYLQMGASAVQVATRFTIAQESGLPDKVKQHYINAQPEDVEVNTASTTGY CCCCCCHHHHHHHHHCHHHHHHHHHHEEHHCCCCHHHHHHHHCCCCCCCEEEEECCCCCC PMRMLKQSPTLQYGIKPNCEGLGYLLDNSGKCPYIDDYYQALESRDPAEGRFVVKNHTCL HHHHHHCCCCEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEECCEEE CTGMARYDCWTCGQTVSRLKETTNRLPDGTWQLPTAEEIFNDYLLSENHSISKPAIEKEQ EECCHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA