Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
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Accession | NC_011027 |
Length | 2,289,249 |
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The map label for this gene is 193213101
Identifier: 193213101
GI number: 193213101
Start: 1593182
End: 1593970
Strand: Direct
Name: 193213101
Synonym: Cpar_1456
Alternate gene names: NA
Gene position: 1593182-1593970 (Clockwise)
Preceding gene: 193213100
Following gene: 193213102
Centisome position: 69.59
GC content: 45.12
Gene sequence:
>789_bases ATGAACAGTATTGAATATCAGATGCTCGATGTCCTCAAACAACTTCGTGATGAGTATGGGGTGTTCGAGATCAAGGCGGA GTTTGAAGCCGAGGGGAGCAGGATTGAGGAGATGATGCGCCTCAAGGACGTTACCTCTAAGGTTAACCTGCCGATTATTC TTAAAATCGGCGGGGTTGAAGCCGTAACCGATATTTACAACGGCCTTTCCATCGGAGTCAAAGGCGTCATTGCGCCCATG GCGGAGACAGCGTTTGCCGTCTCGAAGTTTCTAAATGCTATCAAAACCTTTGTTGCTGAAGATAATCGCGCCGATATTGA TTTTGCTATTAATATTGAAACCATTACAGCATACAACAATCTGGATGAAATCTTTGCTCTTGAGCATATCGATTTGTTGC ATGGCATTACAATGGGAAGAGTGGATTTTGTTGGCTCGATAGGCCGTGACCGTCATATCGTCGATAGCGATCAGATGTAC GACTATTGCCATACGGTGTTCAGCAAGGCTAGGCAGAAAGGACTGAAAACCGGCCTGGGCGGTGCCATCTCGATCGGGTC TATCGATTTCATTTCAAAGCTCCATTCTGAAGCGCTGATCGATAAATTTGAGACCAGAAAAGTTGTTTTCAAATCGAATT CTATACTTAATGATCCTGAGAAAGCTATTCTCAAAGCGGTTGAATTCGAATTGCTCTGGCTCAAGAGTAAGCGCCGTTAC TATCACCGCGTCAAGTCCGAAGATGAATATCGCATCGAAATGCTCGAAAAAAGGCTTGGTCAGGCATAG
Upstream 100 bases:
>100_bases GCCGATAAAGAGTTCATGCTGGCCAAATATGACGATCTCAAGGTGGATGAATTCAGGACGGGGTTACAAACATTAATTGA AATTTTTGAGAATCAGTGAT
Downstream 100 bases:
>100_bases TTACAGTGCCTTATGCAGCACCAGAACGATGAAAGCATGACAATCAAGCGATTGTTTCTGACTGGAGGGACCGGCTTCTT CGGAAAATCTCTCCTTCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MNSIEYQMLDVLKQLRDEYGVFEIKAEFEAEGSRIEEMMRLKDVTSKVNLPIILKIGGVEAVTDIYNGLSIGVKGVIAPM AETAFAVSKFLNAIKTFVAEDNRADIDFAINIETITAYNNLDEIFALEHIDLLHGITMGRVDFVGSIGRDRHIVDSDQMY DYCHTVFSKARQKGLKTGLGGAISIGSIDFISKLHSEALIDKFETRKVVFKSNSILNDPEKAILKAVEFELLWLKSKRRY YHRVKSEDEYRIEMLEKRLGQA
Sequences:
>Translated_262_residues MNSIEYQMLDVLKQLRDEYGVFEIKAEFEAEGSRIEEMMRLKDVTSKVNLPIILKIGGVEAVTDIYNGLSIGVKGVIAPM AETAFAVSKFLNAIKTFVAEDNRADIDFAINIETITAYNNLDEIFALEHIDLLHGITMGRVDFVGSIGRDRHIVDSDQMY DYCHTVFSKARQKGLKTGLGGAISIGSIDFISKLHSEALIDKFETRKVVFKSNSILNDPEKAILKAVEFELLWLKSKRRY YHRVKSEDEYRIEMLEKRLGQA >Mature_262_residues MNSIEYQMLDVLKQLRDEYGVFEIKAEFEAEGSRIEEMMRLKDVTSKVNLPIILKIGGVEAVTDIYNGLSIGVKGVIAPM AETAFAVSKFLNAIKTFVAEDNRADIDFAINIETITAYNNLDEIFALEHIDLLHGITMGRVDFVGSIGRDRHIVDSDQMY DYCHTVFSKARQKGLKTGLGGAISIGSIDFISKLHSEALIDKFETRKVVFKSNSILNDPEKAILKAVEFELLWLKSKRRY YHRVKSEDEYRIEMLEKRLGQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29722; Mature: 29722
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSIEYQMLDVLKQLRDEYGVFEIKAEFEAEGSRIEEMMRLKDVTSKVNLPIILKIGGVE CCCHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHH AVTDIYNGLSIGVKGVIAPMAETAFAVSKFLNAIKTFVAEDNRADIDFAINIETITAYNN HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCC LDEIFALEHIDLLHGITMGRVDFVGSIGRDRHIVDSDQMYDYCHTVFSKARQKGLKTGLG HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC GAISIGSIDFISKLHSEALIDKFETRKVVFKSNSILNDPEKAILKAVEFELLWLKSKRRY CEEEECHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH YHRVKSEDEYRIEMLEKRLGQA HHHCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MNSIEYQMLDVLKQLRDEYGVFEIKAEFEAEGSRIEEMMRLKDVTSKVNLPIILKIGGVE CCCHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHH AVTDIYNGLSIGVKGVIAPMAETAFAVSKFLNAIKTFVAEDNRADIDFAINIETITAYNN HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCC LDEIFALEHIDLLHGITMGRVDFVGSIGRDRHIVDSDQMYDYCHTVFSKARQKGLKTGLG HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC GAISIGSIDFISKLHSEALIDKFETRKVVFKSNSILNDPEKAILKAVEFELLWLKSKRRY CEEEECHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH YHRVKSEDEYRIEMLEKRLGQA HHHCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA