Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
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Accession | NC_011027 |
Length | 2,289,249 |
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The map label for this gene is cphA [H]
Identifier: 193213072
GI number: 193213072
Start: 1558527
End: 1560263
Strand: Direct
Name: cphA [H]
Synonym: Cpar_1425
Alternate gene names: 193213072
Gene position: 1558527-1560263 (Clockwise)
Preceding gene: 193213071
Following gene: 193213073
Centisome position: 68.08
GC content: 58.03
Gene sequence:
>1737_bases ATGACAAGAAAACACCGAAGTGAAGAGACTCTGGTACCGATGCAGTCCCCCAGCATGAAAAGCTGGGGGCAACCGGCAGA GTTACCAAAGCAGAACGTGATCATCGAGTGCGGATGGGGGCGCGTCATTTTCGGCCACACCTTTCACGACAACACCCGGA TCGCCGAAATACTGCGTCAGGAAAAAGAGGGCTTTCGTGACATCGCCCTCTATCTGCGCGATCCGCAGGTAGTGCTCTCG TACGCGCCGCAGAACCTGTTCATCGACCCGTCGTATACCTTCCGCTTGTGGCTCGATGACTACACTCCGCTACAGAAGTC GAGTGGCATGTTTTCGGTTCGTCAGCTCGATCCGGCAAAGGATATCGACCGAGTCAACTGGATCTACAACGTGCACAACA TGGTACCTGCCGATCCGGAATTTTTGAGAGAAATCGCCGCAAAGCAGTGCATCGACTACTGGGTCGCCGTGGACGATGAT ACGGATCAGGTCATCGCCGTGTGCATGACCATCGACCACAAGGCAGCATTCGACGATCCGGAAAACGGGTCGAGTCTCTG GGCGCTGGCGGTCGATCCGCAAGCGAGGCATTCGGGACTCGGGGTTCAGGTGGTGCAGACGGTGGCGGAACATTACAAAG CCAAAGGCCGGAGCTTCGTTGACCTTTCGGTGCTGCACAGCAACGGCGCGGCCATCGAGATGTACAAAAAGCTCGGCTTC GTGCAGATTCCGGTCTTCACCGTCAAGAACAAAAACGCGATCAACGAGCGGCTCTTCTCCGGCCCGCAGCCTGAAGCGGA GCTGAATCCTTACTCGACCATCATCATCAATGAGGCTCGCCGCCGTGGGATTCGCGTTGATGTGCTCGATCCGGTCGATA ACTATTTCCGGCTTTCGTGGGGTGGAGCGAGCGTGGTGTGCCGCGAATCGCTGACCGAGTTGACCTCGGCCATCGCCATG AGCCGCTGCGCCGACAAGCAGACCACGCACCGCATGCTCTCCGCCGCCGGGCTAAGGGTTCCGGATCAGCAGGTCGCCAC CAGCCCGGAAGAAAACATCCGCTTCCTCGAAAAACACGGGCATCTGGTGGTCAAGCCAGCCGACAGCGAACAGGGCAAGG GCATCACGGTTGGGATCACCACTACCGAAGAGCTTGAACAGGCGATCAAAACCGCCGGAGCGATCTGCTCCAAGGTGCTG CTCGAAGAGATGGTCGAAGGCGCGGATCTGCGCATCATCGTGATCGACTACGAAGTGGTTGCCGCCGCGGTCAGACGACC TCCGAAAATCACCGGTGACGGGCAGCACTCGATTCTCGACCTCGTCAAAAAGCAGAGCCGCCGCAGGGAAAAGGCATCGC AGGGCGAAAGCCGGATTCCCATCGACGACGAGCTTCAGCGCACCATCGGCCTGAAAGGCTACAAACTCGACGACATCCTG CCGAAAGGCGAGGAGCTCGAAGTGCGCAAAACGGCCAACCTGCACACCGGCGGTACGATTCACGACGTCACCGACCAGCT TCATCCTGAGCTTGGCAAGGCCGCCTGTAAAGCCGCTGACATTCTCGGCATTCCGGTTACCGGACTCGATTTTCTTGTAT CATCGCCCGAGAAGAGCGATTATGTCATTATCGAAGCCAACGAACGGCCGGGGCTGGCCAACCACGAGCCGCAACCGACC GCCGAGCGCTTCATCGATTTTCTGTTTCCGCAAAGCATTGCAAGGGCGATTTCATGA
Upstream 100 bases:
>100_bases ACATGCTGCTCGATGCGCCGAAGGAACACATCACACCGTTGCGCGGCTCGAAGCTCTGGCAGATCACGCTTCTCGAATAC TGGTTACAGGAGCAGGGACT
Downstream 100 bases:
>100_bases TCAACATCGATACCGATTACCTCCGCTCCATTCTGTTCAAGATGCTCCAGATTCCCAGCCCGACGGGCTACACCGACGAG ATCGTCCACTTCGTCGGGCG
Product: GNAT-family acetyltransferase
Products: NA
Alternate protein names: Cyanophycin synthase [H]
Number of amino acids: Translated: 578; Mature: 577
Protein sequence:
>578_residues MTRKHRSEETLVPMQSPSMKSWGQPAELPKQNVIIECGWGRVIFGHTFHDNTRIAEILRQEKEGFRDIALYLRDPQVVLS YAPQNLFIDPSYTFRLWLDDYTPLQKSSGMFSVRQLDPAKDIDRVNWIYNVHNMVPADPEFLREIAAKQCIDYWVAVDDD TDQVIAVCMTIDHKAAFDDPENGSSLWALAVDPQARHSGLGVQVVQTVAEHYKAKGRSFVDLSVLHSNGAAIEMYKKLGF VQIPVFTVKNKNAINERLFSGPQPEAELNPYSTIIINEARRRGIRVDVLDPVDNYFRLSWGGASVVCRESLTELTSAIAM SRCADKQTTHRMLSAAGLRVPDQQVATSPEENIRFLEKHGHLVVKPADSEQGKGITVGITTTEELEQAIKTAGAICSKVL LEEMVEGADLRIIVIDYEVVAAAVRRPPKITGDGQHSILDLVKKQSRRREKASQGESRIPIDDELQRTIGLKGYKLDDIL PKGEELEVRKTANLHTGGTIHDVTDQLHPELGKAACKAADILGIPVTGLDFLVSSPEKSDYVIIEANERPGLANHEPQPT AERFIDFLFPQSIARAIS
Sequences:
>Translated_578_residues MTRKHRSEETLVPMQSPSMKSWGQPAELPKQNVIIECGWGRVIFGHTFHDNTRIAEILRQEKEGFRDIALYLRDPQVVLS YAPQNLFIDPSYTFRLWLDDYTPLQKSSGMFSVRQLDPAKDIDRVNWIYNVHNMVPADPEFLREIAAKQCIDYWVAVDDD TDQVIAVCMTIDHKAAFDDPENGSSLWALAVDPQARHSGLGVQVVQTVAEHYKAKGRSFVDLSVLHSNGAAIEMYKKLGF VQIPVFTVKNKNAINERLFSGPQPEAELNPYSTIIINEARRRGIRVDVLDPVDNYFRLSWGGASVVCRESLTELTSAIAM SRCADKQTTHRMLSAAGLRVPDQQVATSPEENIRFLEKHGHLVVKPADSEQGKGITVGITTTEELEQAIKTAGAICSKVL LEEMVEGADLRIIVIDYEVVAAAVRRPPKITGDGQHSILDLVKKQSRRREKASQGESRIPIDDELQRTIGLKGYKLDDIL PKGEELEVRKTANLHTGGTIHDVTDQLHPELGKAACKAADILGIPVTGLDFLVSSPEKSDYVIIEANERPGLANHEPQPT AERFIDFLFPQSIARAIS >Mature_577_residues TRKHRSEETLVPMQSPSMKSWGQPAELPKQNVIIECGWGRVIFGHTFHDNTRIAEILRQEKEGFRDIALYLRDPQVVLSY APQNLFIDPSYTFRLWLDDYTPLQKSSGMFSVRQLDPAKDIDRVNWIYNVHNMVPADPEFLREIAAKQCIDYWVAVDDDT DQVIAVCMTIDHKAAFDDPENGSSLWALAVDPQARHSGLGVQVVQTVAEHYKAKGRSFVDLSVLHSNGAAIEMYKKLGFV QIPVFTVKNKNAINERLFSGPQPEAELNPYSTIIINEARRRGIRVDVLDPVDNYFRLSWGGASVVCRESLTELTSAIAMS RCADKQTTHRMLSAAGLRVPDQQVATSPEENIRFLEKHGHLVVKPADSEQGKGITVGITTTEELEQAIKTAGAICSKVLL EEMVEGADLRIIVIDYEVVAAAVRRPPKITGDGQHSILDLVKKQSRRREKASQGESRIPIDDELQRTIGLKGYKLDDILP KGEELEVRKTANLHTGGTIHDVTDQLHPELGKAACKAADILGIPVTGLDFLVSSPEKSDYVIIEANERPGLANHEPQPTA ERFIDFLFPQSIARAIS
Specific function: Catalyzes the ATP-dependent polymerization of arginine and aspartate to multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water-insoluble reserve polymer) [H]
COG id: COG1181
COG function: function code M; D-alanine-D-alanine ligase and related ATP-grasp enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013651 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR011810 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; PF08443 RimK [H]
EC number: =6.3.2.29; =6.3.2.30 [H]
Molecular weight: Translated: 64469; Mature: 64338
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRKHRSEETLVPMQSPSMKSWGQPAELPKQNVIIECGWGRVIFGHTFHDNTRIAEILRQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCHHHHHHHHH EKEGFRDIALYLRDPQVVLSYAPQNLFIDPSYTFRLWLDDYTPLQKSSGMFSVRQLDPAK HHHCHHEEEEEECCCEEEEEECCCCEEECCCCEEEEEECCCCCCCCCCCCEEEECCCCCH DIDRVNWIYNVHNMVPADPEFLREIAAKQCIDYWVAVDDDTDQVIAVCMTIDHKAAFDDP HHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHEEEEECCCCHHEEEEEEEECCCCCCCCC ENGSSLWALAVDPQARHSGLGVQVVQTVAEHYKAKGRSFVDLSVLHSNGAAIEMYKKLGF CCCCEEEEEEECCCHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEHHHHHCCE VQIPVFTVKNKNAINERLFSGPQPEAELNPYSTIIINEARRRGIRVDVLDPVDNYFRLSW EEEEEEEECCCCHHHHHHHCCCCCCCCCCCCEEEEEEHHHHCCCEEEEECCCCCEEEEEC GGASVVCRESLTELTSAIAMSRCADKQTTHRMLSAAGLRVPDQQVATSPEENIRFLEKHG CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHCC HLVVKPADSEQGKGITVGITTTEELEQAIKTAGAICSKVLLEEMVEGADLRIIVIDYEVV CEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHH AAAVRRPPKITGDGQHSILDLVKKQSRRREKASQGESRIPIDDELQRTIGLKGYKLDDIL HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHCC PKGEELEVRKTANLHTGGTIHDVTDQLHPELGKAACKAADILGIPVTGLDFLVSSPEKSD CCCCCEEEEEECCCCCCCCHHHHHHHHCHHHHHHHHHHHHEECCCCCCHHHHCCCCCCCC YVIIEANERPGLANHEPQPTAERFIDFLFPQSIARAIS EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TRKHRSEETLVPMQSPSMKSWGQPAELPKQNVIIECGWGRVIFGHTFHDNTRIAEILRQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCHHHHHHHHH EKEGFRDIALYLRDPQVVLSYAPQNLFIDPSYTFRLWLDDYTPLQKSSGMFSVRQLDPAK HHHCHHEEEEEECCCEEEEEECCCCEEECCCCEEEEEECCCCCCCCCCCCEEEECCCCCH DIDRVNWIYNVHNMVPADPEFLREIAAKQCIDYWVAVDDDTDQVIAVCMTIDHKAAFDDP HHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHEEEEECCCCHHEEEEEEEECCCCCCCCC ENGSSLWALAVDPQARHSGLGVQVVQTVAEHYKAKGRSFVDLSVLHSNGAAIEMYKKLGF CCCCEEEEEEECCCHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEHHHHHCCE VQIPVFTVKNKNAINERLFSGPQPEAELNPYSTIIINEARRRGIRVDVLDPVDNYFRLSW EEEEEEEECCCCHHHHHHHCCCCCCCCCCCCEEEEEEHHHHCCCEEEEECCCCCEEEEEC GGASVVCRESLTELTSAIAMSRCADKQTTHRMLSAAGLRVPDQQVATSPEENIRFLEKHG CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHCC HLVVKPADSEQGKGITVGITTTEELEQAIKTAGAICSKVLLEEMVEGADLRIIVIDYEVV CEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHH AAAVRRPPKITGDGQHSILDLVKKQSRRREKASQGESRIPIDDELQRTIGLKGYKLDDIL HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHCC PKGEELEVRKTANLHTGGTIHDVTDQLHPELGKAACKAADILGIPVTGLDFLVSSPEKSD CCCCCEEEEEECCCCCCCCHHHHHHHHCHHHHHHHHHHHHEECCCCCCHHHHCCCCCCCC YVIIEANERPGLANHEPQPTAERFIDFLFPQSIARAIS EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA