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The map label for this gene is 193212912

Identifier: 193212912

GI number: 193212912

Start: 1377756

End: 1378175

Strand: Direct

Name: 193212912

Synonym: Cpar_1262

Alternate gene names: NA

Gene position: 1377756-1378175 (Clockwise)

Preceding gene: 193212908

Following gene: 193212913

Centisome position: 60.18

GC content: 51.19

Gene sequence:

>420_bases
ATGATAGAGATCAAAAGAACCCCTCTGGATCTGATTGACGATATATACAGCATCGCCTACTGGATGACCGGCAGCGAAAA
GGCCTCTTCCGATCTGGTGAGTTCCACGTACCTCAACACCGATTTCGATGTCGAAAAGACCGATGTACTGAAAACGTTCA
GGAACTGCTACTTGGAAACCTACGGACAACACGCCGATCTGGACATTTACGAGAGCGACCACGCACCTGCAAGTCTGATG
GATTCATTCAGGAAATGGACGGCAGACATCAAGCTCTCGGTGCTGCTTTCCGAAATCACCGGCCTGAAGCACGCGCAGAT
TTCTGAAGTCATCGGCAAACCGGTGGACACCATCAGGTTGTGGCTGTTCTGGGGACGGAAGTTCTTTACCCACGACCATC
TTCTAAGGGCCTCTGCCTGA

Upstream 100 bases:

>100_bases
TTGCATTTTTCGGGAAAAAAAACTGGACAAGTCACTTTTTTTATCTACATTAAAACAGGACAAAATTTATCCAAGTTACA
ATCATAGAAAAGGAGCCATC

Downstream 100 bases:

>100_bases
ATCGTTTTGATGCCTCCATATATCCCAGCGCAAGACCGGTTTCTCCAGCGAACCGGTCTTTTGCTTTTACAGGCCAACAG
GCGTATATTTTTTTGTGCAC

Product: ECF subfamily RNA polymerase sigma-24 subunit

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Factor; ECF Subfamily RNA Polymerase Sigma-24 Subunit; Sigma-

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MIEIKRTPLDLIDDIYSIAYWMTGSEKASSDLVSSTYLNTDFDVEKTDVLKTFRNCYLETYGQHADLDIYESDHAPASLM
DSFRKWTADIKLSVLLSEITGLKHAQISEVIGKPVDTIRLWLFWGRKFFTHDHLLRASA

Sequences:

>Translated_139_residues
MIEIKRTPLDLIDDIYSIAYWMTGSEKASSDLVSSTYLNTDFDVEKTDVLKTFRNCYLETYGQHADLDIYESDHAPASLM
DSFRKWTADIKLSVLLSEITGLKHAQISEVIGKPVDTIRLWLFWGRKFFTHDHLLRASA
>Mature_139_residues
MIEIKRTPLDLIDDIYSIAYWMTGSEKASSDLVSSTYLNTDFDVEKTDVLKTFRNCYLETYGQHADLDIYESDHAPASLM
DSFRKWTADIKLSVLLSEITGLKHAQISEVIGKPVDTIRLWLFWGRKFFTHDHLLRASA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16008; Mature: 16008

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEIKRTPLDLIDDIYSIAYWMTGSEKASSDLVSSTYLNTDFDVEKTDVLKTFRNCYLET
CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
YGQHADLDIYESDHAPASLMDSFRKWTADIKLSVLLSEITGLKHAQISEVIGKPVDTIRL
CCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHH
WLFWGRKFFTHDHLLRASA
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIEIKRTPLDLIDDIYSIAYWMTGSEKASSDLVSSTYLNTDFDVEKTDVLKTFRNCYLET
CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
YGQHADLDIYESDHAPASLMDSFRKWTADIKLSVLLSEITGLKHAQISEVIGKPVDTIRL
CCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHH
WLFWGRKFFTHDHLLRASA
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA