Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192289135

Identifier: 192289135

GI number: 192289135

Start: 739047

End: 741449

Strand: Reverse

Name: 192289135

Synonym: Rpal_0705

Alternate gene names: NA

Gene position: 741449-739047 (Counterclockwise)

Preceding gene: 192289147

Following gene: 192289134

Centisome position: 12.91

GC content: 64.79

Gene sequence:

>2403_bases
ATGTCTTTTGTTTCTATCGATCACACACCACGCGCTCAGAATCGTATCGCCTGGTCGTTTGATGTTTTCGATACATTTCT
GATCCGCGCCTGCACCACGCCGACCGGCGTATTCGAGCTGACTTATCAGCTGTCGCGTGTTTCGGATCTGTGTCCGAACA
TGTCTGAGCATTTCGTCCAGCATCGTATCTTGGCCGAGTCGCGTGTGCGCGAGGCGGCGCGTTCGCGCGGAGAGGCGACA
GAGATCAACATCGACCAGATCTACGCGCGCTTCCCCTTCCGGCTGTTCGGATTGGAGCGCGAGGATCTCAACCACCTGAT
CGAGGCCGAGTTCAGCGCCGAACTCGAACTGTGCCGAATCAATCCGGACATGCTCGAGCAATATCGCGCGCGGCGCCGCG
CCGGGAATCGCGTCGGCTTCATCTCCGACACCTATTGGAATACCGAGCGGCTGGGACGGCTGCTGCGCGCCTGCAGTCCG
GGGCTGACGTGGGATTTCCTCTACGCATCGTGCGATCACGGCAGCAGTAAAGGTGAGGATCTGTTCGCGACCTATCTGCG
CCAACAGGGCGTCGACGCGAGCTCGGCATACCATGTCGGCGACAATGAGCATGCCGACATTCGCGGCGCGAAGCGCCATG
GCATCCGGCCACGGCACTATCCGCAGGCCGGGCCGCGGCTCACAACGCGGCTGCTGCGCGAAGATTTGCTGCAGCAGCTG
ATGTTCAAAGGACAGCCGACGAGGCTCGACCGCGGCGCGCGTACACTGCGGCGGATGGTGGCGGCGCGTAGTGCCGAACA
ATCTGCGGCGCATCATCTCGGCAGCACGGTGGTCGGACCGGTGTTGGCAGCATTCGACCAATTCGTGGCGACGCGCAGGG
CCGACCTTGCAGGTGATGGCCGCCGTGTCGCGATCGGGTTTTTGGGCCGCGACGGCTTCCTGTCGCACCGCCTGTGGCAA
CAGAGCCGCGGCGAACCGGCCGCTTATCTGGAGATCAATCGCCGGGTCAGCCTGATTGCCTCGGCCGATACGATCGGGCC
AATCTGCGAATTGATCCGCAAGATCCCAAGGATCGACGCGGCGAAACTGCAGGACATGCTCAAAATCTTGCCGCCGGCCC
TGGCGGATTTTTTTGCGCACTGCGACGGTGGAATCGCCACCGGCGCCGAACTGGCTGATGCCCTTCCAAACCTGATCGAG
TCGCACGAGATCGCAATGCTCGCGGCCAGTCTGCGCGGACGCCTGCTCGATTACATCCGGCAGCAGATTCCCGACCTCGA
CGACTGCACCGACCTGCTGCTGGTCGATCTCGGCTATTCGGCCAGCGTGCAGAAGGCGCTGAGCCGCGTGTTCAAACTCG
CCGGTCTCGGGCTGCGCGTCCACGGCTGCTATTTGCTCGCCCTCGGCGACGCGTGGGACGAGCTCGCCGAGGAAGACACC
GTCTCGGGGCTGATCGACGATCTGGTGCTGGCGCCGCATCTCAATCGAACGCTGATCCGTAACGCGCCGATCTTCGAGCA
GATCTGCTGCTCGGCAGACGGCTCGGTACGCGACTATGAGGACGGTCACGTGCTCCGCGAGCCCGATCCGCGACCGGCCA
CGCAGATCGAGGTGACATCCGAGATTCAGGCGGGAGTGTTGACCTACGCGTCGGCGGCACGCGGCGTCGCCGACGAGGTT
GGGCTCGATCCCTATCGGGACCTCGGCGTCGCCGCGCGCGCGACCGCCACGACGCTCGGCCGCCTGTTGCTGCTGCCGGA
CGACGAAGAACTGGCGCTGTTCGGCTCATTTCAGCACGACGTCAATCTCGGCACCGATACGCTCGCGCCCATGATTCACA
GCAACGCGATCAGCAACCAGATCGCGCTGCGGGGGCTGCCGGTGACCTGTGCGCTGTCGCCGCCGCCGATGTGGATGGCG
GGCAGCTTCGCTGCGGTCTCGCCGTCGCATGCCTATCTGTATGCGTTGTTCGGTGCTGGCCAACTTCCCGGCGAGATGGT
CGGCGACCGGCCTCACGGCTCGCTCCGAATCGGTCTGTTCGGTGCGGACGGCGCGGGATCGCTTCAGGAGGTGTCGGTGC
TGCGTACTGGTTTCGGCGGCTTGCGCCTGCGCATTCCGCTGTCTGGCGCGATGCAGATCGCCATGATCGCGGTGCCGCTG
GGCCGACTCGCGCGCGAGGGCCTGATCGACGGGGTGATGATCCAGCGCGGAAGCACGGCCGCCGAGACGATGCGCACCGA
AGCGTTCATGCCGGTCGCCGCCGACCGCCTCAGCACGGCCGGGCTGACCCGCAGCGGACGGCACTACCTCGCTGCAGACG
ACGAGGGCTGCCTGCTGATTCCGGTCGAGCCGGCGGACGGCATCACCATCTACACCGTCGCAGTGACCCCGCTCGGCTGT
TAG

Upstream 100 bases:

>100_bases
GTGAAAGCAATCAACTGATCGCACGACGACTTTCTGTATCGACGCGCCTGATTTGTACCATGCGTCCGTTGAACAAAGGC
AAACAATTGAGTTTCGCCTT

Downstream 100 bases:

>100_bases
CGGATCAGGCGCCGGCCGCGCCTGATCCGGCGGCCTGCTGCGTTGAAGTCATAACCATGCCTTCAACGAGCGCGCCATGA
TGCCGACCTCCCCCTCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Haloacid Dehalogenase Domain-Containing Protein Hydrolase; Xsa-Associated Protein; HAD Family Hydrolase; Hydrolase; HAD Superfamily Hydrolase-Like Protein

Number of amino acids: Translated: 800; Mature: 799

Protein sequence:

>800_residues
MSFVSIDHTPRAQNRIAWSFDVFDTFLIRACTTPTGVFELTYQLSRVSDLCPNMSEHFVQHRILAESRVREAARSRGEAT
EINIDQIYARFPFRLFGLEREDLNHLIEAEFSAELELCRINPDMLEQYRARRRAGNRVGFISDTYWNTERLGRLLRACSP
GLTWDFLYASCDHGSSKGEDLFATYLRQQGVDASSAYHVGDNEHADIRGAKRHGIRPRHYPQAGPRLTTRLLREDLLQQL
MFKGQPTRLDRGARTLRRMVAARSAEQSAAHHLGSTVVGPVLAAFDQFVATRRADLAGDGRRVAIGFLGRDGFLSHRLWQ
QSRGEPAAYLEINRRVSLIASADTIGPICELIRKIPRIDAAKLQDMLKILPPALADFFAHCDGGIATGAELADALPNLIE
SHEIAMLAASLRGRLLDYIRQQIPDLDDCTDLLLVDLGYSASVQKALSRVFKLAGLGLRVHGCYLLALGDAWDELAEEDT
VSGLIDDLVLAPHLNRTLIRNAPIFEQICCSADGSVRDYEDGHVLREPDPRPATQIEVTSEIQAGVLTYASAARGVADEV
GLDPYRDLGVAARATATTLGRLLLLPDDEELALFGSFQHDVNLGTDTLAPMIHSNAISNQIALRGLPVTCALSPPPMWMA
GSFAAVSPSHAYLYALFGAGQLPGEMVGDRPHGSLRIGLFGADGAGSLQEVSVLRTGFGGLRLRIPLSGAMQIAMIAVPL
GRLAREGLIDGVMIQRGSTAAETMRTEAFMPVAADRLSTAGLTRSGRHYLAADDEGCLLIPVEPADGITIYTVAVTPLGC

Sequences:

>Translated_800_residues
MSFVSIDHTPRAQNRIAWSFDVFDTFLIRACTTPTGVFELTYQLSRVSDLCPNMSEHFVQHRILAESRVREAARSRGEAT
EINIDQIYARFPFRLFGLEREDLNHLIEAEFSAELELCRINPDMLEQYRARRRAGNRVGFISDTYWNTERLGRLLRACSP
GLTWDFLYASCDHGSSKGEDLFATYLRQQGVDASSAYHVGDNEHADIRGAKRHGIRPRHYPQAGPRLTTRLLREDLLQQL
MFKGQPTRLDRGARTLRRMVAARSAEQSAAHHLGSTVVGPVLAAFDQFVATRRADLAGDGRRVAIGFLGRDGFLSHRLWQ
QSRGEPAAYLEINRRVSLIASADTIGPICELIRKIPRIDAAKLQDMLKILPPALADFFAHCDGGIATGAELADALPNLIE
SHEIAMLAASLRGRLLDYIRQQIPDLDDCTDLLLVDLGYSASVQKALSRVFKLAGLGLRVHGCYLLALGDAWDELAEEDT
VSGLIDDLVLAPHLNRTLIRNAPIFEQICCSADGSVRDYEDGHVLREPDPRPATQIEVTSEIQAGVLTYASAARGVADEV
GLDPYRDLGVAARATATTLGRLLLLPDDEELALFGSFQHDVNLGTDTLAPMIHSNAISNQIALRGLPVTCALSPPPMWMA
GSFAAVSPSHAYLYALFGAGQLPGEMVGDRPHGSLRIGLFGADGAGSLQEVSVLRTGFGGLRLRIPLSGAMQIAMIAVPL
GRLAREGLIDGVMIQRGSTAAETMRTEAFMPVAADRLSTAGLTRSGRHYLAADDEGCLLIPVEPADGITIYTVAVTPLGC
>Mature_799_residues
SFVSIDHTPRAQNRIAWSFDVFDTFLIRACTTPTGVFELTYQLSRVSDLCPNMSEHFVQHRILAESRVREAARSRGEATE
INIDQIYARFPFRLFGLEREDLNHLIEAEFSAELELCRINPDMLEQYRARRRAGNRVGFISDTYWNTERLGRLLRACSPG
LTWDFLYASCDHGSSKGEDLFATYLRQQGVDASSAYHVGDNEHADIRGAKRHGIRPRHYPQAGPRLTTRLLREDLLQQLM
FKGQPTRLDRGARTLRRMVAARSAEQSAAHHLGSTVVGPVLAAFDQFVATRRADLAGDGRRVAIGFLGRDGFLSHRLWQQ
SRGEPAAYLEINRRVSLIASADTIGPICELIRKIPRIDAAKLQDMLKILPPALADFFAHCDGGIATGAELADALPNLIES
HEIAMLAASLRGRLLDYIRQQIPDLDDCTDLLLVDLGYSASVQKALSRVFKLAGLGLRVHGCYLLALGDAWDELAEEDTV
SGLIDDLVLAPHLNRTLIRNAPIFEQICCSADGSVRDYEDGHVLREPDPRPATQIEVTSEIQAGVLTYASAARGVADEVG
LDPYRDLGVAARATATTLGRLLLLPDDEELALFGSFQHDVNLGTDTLAPMIHSNAISNQIALRGLPVTCALSPPPMWMAG
SFAAVSPSHAYLYALFGAGQLPGEMVGDRPHGSLRIGLFGADGAGSLQEVSVLRTGFGGLRLRIPLSGAMQIAMIAVPLG
RLAREGLIDGVMIQRGSTAAETMRTEAFMPVAADRLSTAGLTRSGRHYLAADDEGCLLIPVEPADGITIYTVAVTPLGC

Specific function: Unknown

COG id: COG5610

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87389; Mature: 87258

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: PS00047 HISTONE_H4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFVSIDHTPRAQNRIAWSFDVFDTFLIRACTTPTGVFELTYQLSRVSDLCPNMSEHFVQ
CCEEECCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
HRILAESRVREAARSRGEATEINIDQIYARFPFRLFGLEREDLNHLIEAEFSAELELCRI
HHHHHHHHHHHHHHCCCCCEEECHHHHHHHCCHHEECCCHHHHHHHHHHHHCCCEEEEEC
NPDMLEQYRARRRAGNRVGFISDTYWNTERLGRLLRACSPGLTWDFLYASCDHGSSKGED
CHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHH
LFATYLRQQGVDASSAYHVGDNEHADIRGAKRHGIRPRHYPQAGPRLTTRLLREDLLQQL
HHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
MFKGQPTRLDRGARTLRRMVAARSAEQSAAHHLGSTVVGPVLAAFDQFVATRRADLAGDG
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RRVAIGFLGRDGFLSHRLWQQSRGEPAAYLEINRRVSLIASADTIGPICELIRKIPRIDA
CEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCHHHHHHHHHHCCCCCH
AKLQDMLKILPPALADFFAHCDGGIATGAELADALPNLIESHEIAMLAASLRGRLLDYIR
HHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQIPDLDDCTDLLLVDLGYSASVQKALSRVFKLAGLGLRVHGCYLLALGDAWDELAEEDT
HHCCCCCHHHHHHHEECCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEECCHHHHHHHHHH
VSGLIDDLVLAPHLNRTLIRNAPIFEQICCSADGSVRDYEDGHVLREPDPRPATQIEVTS
HHHHHHHHHHCCCCCHHHHCCCCHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCEEEEHH
EIQAGVLTYASAARGVADEVGLDPYRDLGVAARATATTLGRLLLLPDDEELALFGSFQHD
HHHHHHHHHHHHHCCCHHHCCCCCCHHCCHHHHHHHHHHCEEEECCCCCCEEEEECCCCC
VNLGTDTLAPMIHSNAISNQIALRGLPVTCALSPPPMWMAGSFAAVSPSHAYLYALFGAG
CCCCHHHHHHHHHHHHHCCCEEEECCCEEEECCCCCCCCCCCCEECCCCCEEEEEEECCC
QLPGEMVGDRPHGSLRIGLFGADGAGSLQEVSVLRTGFGGLRLRIPLSGAMQIAMIAVPL
CCCHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHH
GRLAREGLIDGVMIQRGSTAAETMRTEAFMPVAADRLSTAGLTRSGRHYLAADDEGCLLI
HHHHHHHHHCCCEEECCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEECCCCEEEE
PVEPADGITIYTVAVTPLGC
EECCCCCEEEEEEEECCCCC
>Mature Secondary Structure 
SFVSIDHTPRAQNRIAWSFDVFDTFLIRACTTPTGVFELTYQLSRVSDLCPNMSEHFVQ
CEEECCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
HRILAESRVREAARSRGEATEINIDQIYARFPFRLFGLEREDLNHLIEAEFSAELELCRI
HHHHHHHHHHHHHHCCCCCEEECHHHHHHHCCHHEECCCHHHHHHHHHHHHCCCEEEEEC
NPDMLEQYRARRRAGNRVGFISDTYWNTERLGRLLRACSPGLTWDFLYASCDHGSSKGED
CHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHH
LFATYLRQQGVDASSAYHVGDNEHADIRGAKRHGIRPRHYPQAGPRLTTRLLREDLLQQL
HHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH
MFKGQPTRLDRGARTLRRMVAARSAEQSAAHHLGSTVVGPVLAAFDQFVATRRADLAGDG
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RRVAIGFLGRDGFLSHRLWQQSRGEPAAYLEINRRVSLIASADTIGPICELIRKIPRIDA
CEEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCHHHHHHHHHHCCCCCH
AKLQDMLKILPPALADFFAHCDGGIATGAELADALPNLIESHEIAMLAASLRGRLLDYIR
HHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQIPDLDDCTDLLLVDLGYSASVQKALSRVFKLAGLGLRVHGCYLLALGDAWDELAEEDT
HHCCCCCHHHHHHHEECCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEECCHHHHHHHHHH
VSGLIDDLVLAPHLNRTLIRNAPIFEQICCSADGSVRDYEDGHVLREPDPRPATQIEVTS
HHHHHHHHHHCCCCCHHHHCCCCHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCEEEEHH
EIQAGVLTYASAARGVADEVGLDPYRDLGVAARATATTLGRLLLLPDDEELALFGSFQHD
HHHHHHHHHHHHHCCCHHHCCCCCCHHCCHHHHHHHHHHCEEEECCCCCCEEEEECCCCC
VNLGTDTLAPMIHSNAISNQIALRGLPVTCALSPPPMWMAGSFAAVSPSHAYLYALFGAG
CCCCHHHHHHHHHHHHHCCCEEEECCCEEEECCCCCCCCCCCCEECCCCCEEEEEEECCC
QLPGEMVGDRPHGSLRIGLFGADGAGSLQEVSVLRTGFGGLRLRIPLSGAMQIAMIAVPL
CCCHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHH
GRLAREGLIDGVMIQRGSTAAETMRTEAFMPVAADRLSTAGLTRSGRHYLAADDEGCLLI
HHHHHHHHHCCCEEECCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEECCCCEEEE
PVEPADGITIYTVAVTPLGC
EECCCCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA