Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
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Accession | NC_011004 |
Length | 5,744,041 |
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The map label for this gene is 192289134
Identifier: 192289134
GI number: 192289134
Start: 737642
End: 738970
Strand: Reverse
Name: 192289134
Synonym: Rpal_0704
Alternate gene names: NA
Gene position: 738970-737642 (Counterclockwise)
Preceding gene: 192289135
Following gene: 192289133
Centisome position: 12.86
GC content: 68.47
Gene sequence:
>1329_bases ATGATGCCGACCTCCCCCTCCGCCAAGCTCACCGAACTGCTGCAAGCAAGCGGGCTGCGGCTCGGGACGTCGCAGCGGCG ACGACTGGACTGGCTGGCGGATCGCGTGGGTCCCGCACGGCTGCAGCGTCCCGGCGAAGCGCCGCACCGTGACGCCGGGC TGGTGATCGTCACTGAGCCGATGAGCGGGGCCGGCGCCGAGCTGTTCTGCAACGCGCTGCCGCGGGATTGCATGGTGGTG CTGCCTTTCGGTGAAAATCCCGACTTCGATTTCCTCAAATCCAAACTCACCGAATTCGGAACTGTCGGCCCGTGCGGTGC CGAGGGCCCGCATGAAATGTGGTGGGGCGGAGTCGGCGACGCCGAGACGCTCGTGGCCGATGCTGGCGAGACAGCCCGGC CTCGGATCGTGTCCTGCTATCAGCACGGCTGCGACGATCTGGTCTGGCCGCTGCGGCAAGCCGCCGAGTCGTTCGGTCTC GCCGCGCACATCGGCCCACTGATGAGCGAATGCGACGACCGTGTGCTCGCTTATGAGAAGGCCGAGTTCATCCTGCAGGC CTGGGAGCTGTTTCCCGAACCGCTGCTCTATATCGAAGCCGGCGCGTTGTTGCAGGCGCCGCCGCTTCTGCCGGCACAGC TCGATTGTGACGTCGCCCTGCACCGATGGAATCGCTGGGAGCTGTCGGCGCGGACCTTGTATTTCGGCCGTTCGGACGCA GCGAAGGCGCTGCTGCTCGGCTGGCGGCGGTTGGCCAAAGCCCACCCCGCCGTCTGGGACGGCTATCTGCTCGACCAGGC CTGGAGTCTGGCGCTGTCGCGCAGCGCGCTCGACACGGTCTGGCTGCCGCGCAGCTATCACACGCTGCATGGCGATCCGG CGCAGCCCTCGGCGGTGATCGTTCACGATCTGCCCGGCACCTCGGCCGACCTTGGCCCGGACCCCGGCTTCGCATCGCTG GTGCGTACCGCGCGCCGCGCCGGCCGCACCGGCGGACGTGATGCGCTGGTGGTGATGACGTCACATCAAGCCTCCGGCGA CGGCGTTGCGGTCATCCTGCGGGACATCGCGGCCGCGGACAGCCGGCTCGTCGCCACAACGGTCGAGACCACGACGAGCG CCTTCGCAGCCGACAATGGCGGGTTCGGCCGGCTCGAACTGATGCTGTGCGCATGGCGGGATGAAGTCGACTTCGCGCGC GAAGCGGCGGCATCGGCGCGGCTGCGCGTCGCGGAGATCGTGCCCGGCCAGCCGATCCCTCACGACTTCTTCGCCAGGCT CGATCGGCAGGACGCCGGAGCCCCTTCGCTGATTGCCCACGGTCGCTAA
Upstream 100 bases:
>100_bases GCAGTGACCCCGCTCGGCTGTTAGCGGATCAGGCGCCGGCCGCGCCTGATCCGGCGGCCTGCTGCGTTGAAGTCATAACC ATGCCTTCAACGAGCGCGCC
Downstream 100 bases:
>100_bases CTCGCCATCACCACCAGGAGCTCGTCATGCTGAAAAACCTGATCCTGTTCGCCGCCAACGACGAACACCGGCCCGCGCTC GCCGCGCTGCTGCGCGAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MMPTSPSAKLTELLQASGLRLGTSQRRRLDWLADRVGPARLQRPGEAPHRDAGLVIVTEPMSGAGAELFCNALPRDCMVV LPFGENPDFDFLKSKLTEFGTVGPCGAEGPHEMWWGGVGDAETLVADAGETARPRIVSCYQHGCDDLVWPLRQAAESFGL AAHIGPLMSECDDRVLAYEKAEFILQAWELFPEPLLYIEAGALLQAPPLLPAQLDCDVALHRWNRWELSARTLYFGRSDA AKALLLGWRRLAKAHPAVWDGYLLDQAWSLALSRSALDTVWLPRSYHTLHGDPAQPSAVIVHDLPGTSADLGPDPGFASL VRTARRAGRTGGRDALVVMTSHQASGDGVAVILRDIAAADSRLVATTVETTTSAFAADNGGFGRLELMLCAWRDEVDFAR EAAASARLRVAEIVPGQPIPHDFFARLDRQDAGAPSLIAHGR
Sequences:
>Translated_442_residues MMPTSPSAKLTELLQASGLRLGTSQRRRLDWLADRVGPARLQRPGEAPHRDAGLVIVTEPMSGAGAELFCNALPRDCMVV LPFGENPDFDFLKSKLTEFGTVGPCGAEGPHEMWWGGVGDAETLVADAGETARPRIVSCYQHGCDDLVWPLRQAAESFGL AAHIGPLMSECDDRVLAYEKAEFILQAWELFPEPLLYIEAGALLQAPPLLPAQLDCDVALHRWNRWELSARTLYFGRSDA AKALLLGWRRLAKAHPAVWDGYLLDQAWSLALSRSALDTVWLPRSYHTLHGDPAQPSAVIVHDLPGTSADLGPDPGFASL VRTARRAGRTGGRDALVVMTSHQASGDGVAVILRDIAAADSRLVATTVETTTSAFAADNGGFGRLELMLCAWRDEVDFAR EAAASARLRVAEIVPGQPIPHDFFARLDRQDAGAPSLIAHGR >Mature_442_residues MMPTSPSAKLTELLQASGLRLGTSQRRRLDWLADRVGPARLQRPGEAPHRDAGLVIVTEPMSGAGAELFCNALPRDCMVV LPFGENPDFDFLKSKLTEFGTVGPCGAEGPHEMWWGGVGDAETLVADAGETARPRIVSCYQHGCDDLVWPLRQAAESFGL AAHIGPLMSECDDRVLAYEKAEFILQAWELFPEPLLYIEAGALLQAPPLLPAQLDCDVALHRWNRWELSARTLYFGRSDA AKALLLGWRRLAKAHPAVWDGYLLDQAWSLALSRSALDTVWLPRSYHTLHGDPAQPSAVIVHDLPGTSADLGPDPGFASL VRTARRAGRTGGRDALVVMTSHQASGDGVAVILRDIAAADSRLVATTVETTTSAFAADNGGFGRLELMLCAWRDEVDFAR EAAASARLRVAEIVPGQPIPHDFFARLDRQDAGAPSLIAHGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47844; Mature: 47844
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPTSPSAKLTELLQASGLRLGTSQRRRLDWLADRVGPARLQRPGEAPHRDAGLVIVTEP CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCEEEEECC MSGAGAELFCNALPRDCMVVLPFGENPDFDFLKSKLTEFGTVGPCGAEGPHEMWWGGVGD CCCCCHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCC AETLVADAGETARPRIVSCYQHGCDDLVWPLRQAAESFGLAAHIGPLMSECDDRVLAYEK HHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHH AEFILQAWELFPEPLLYIEAGALLQAPPLLPAQLDCDVALHRWNRWELSARTLYFGRSDA HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEEEEECCCHH AKALLLGWRRLAKAHPAVWDGYLLDQAWSLALSRSALDTVWLPRSYHTLHGDPAQPSAVI HHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEE VHDLPGTSADLGPDPGFASLVRTARRAGRTGGRDALVVMTSHQASGDGVAVILRDIAAAD EECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCC SRLVATTVETTTSAFAADNGGFGRLELMLCAWRDEVDFAREAAASARLRVAEIVPGQPIP CEEEEEEEHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCEEEEECCCCCCCC HDFFARLDRQDAGAPSLIAHGR HHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MMPTSPSAKLTELLQASGLRLGTSQRRRLDWLADRVGPARLQRPGEAPHRDAGLVIVTEP CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCEEEEECC MSGAGAELFCNALPRDCMVVLPFGENPDFDFLKSKLTEFGTVGPCGAEGPHEMWWGGVGD CCCCCHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCC AETLVADAGETARPRIVSCYQHGCDDLVWPLRQAAESFGLAAHIGPLMSECDDRVLAYEK HHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHH AEFILQAWELFPEPLLYIEAGALLQAPPLLPAQLDCDVALHRWNRWELSARTLYFGRSDA HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEEEEECCCHH AKALLLGWRRLAKAHPAVWDGYLLDQAWSLALSRSALDTVWLPRSYHTLHGDPAQPSAVI HHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEE VHDLPGTSADLGPDPGFASLVRTARRAGRTGGRDALVVMTSHQASGDGVAVILRDIAAAD EECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCC SRLVATTVETTTSAFAADNGGFGRLELMLCAWRDEVDFAREAAASARLRVAEIVPGQPIP CEEEEEEEHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCEEEEECCCCCCCC HDFFARLDRQDAGAPSLIAHGR HHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA