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The map label for this gene is crtI [H]

Identifier: 192288836

GI number: 192288836

Start: 433392

End: 435527

Strand: Reverse

Name: crtI [H]

Synonym: Rpal_0405

Alternate gene names: 192288836

Gene position: 435527-433392 (Counterclockwise)

Preceding gene: 192288838

Following gene: 192288834

Centisome position: 7.58

GC content: 67.79

Gene sequence:

>2136_bases
ATGAAGACCTTCCTGACGGTGAAGCTGGTCCTGGTTCCGTTTGCGGTGTTCTGGGCACTGCTGGCGCTCCACCAACCCTC
CTGGGCGATCTGGCTCGGCCTCGGGTTGTCGCTGGCGGGCAATGCCTGGCGGGCGTATCGCCGCGAATTGTTCGTGCTCG
AAGCCGGCGGGCTGGTGCTATTCGCAGCTCTCGCAGCGCTCTCACTGATCGCGCCTGCTGTCGCCGCCAGCAACGCGCTG
TGGCTGTCATTCGCGGGGCTGGCCGGGATCAGCGCGCTCAGCCTGGCGGCAAAGCGGCCCTGGACTTCAGACTATTCGCG
CGCCGCCCATCCGGACAACGCCGACACCCCGCAGTTCTTCCTGGTCAATGCTGCAATCACCGCTCTCTGGGCGGTGCTGT
TCGGCGCGATTGCCGCCTGCCGCTATATCGACGCGCCGGGCGAGGTCATCACCGCCATCGTCAGCGTCGGCGCGCTGATC
TCGATCTTCGGACCGAAGGCGGCCATTCACCTGATCCTGAACCGAATGGCGGCGTCGCGGGAAAGCTATCGCTGGCCGAC
GCCGTCGTTCGCGCCGTTCGAGGTGCAGGACTGCGACGTGGTGATCATTGGCGCCGGCATTGGCGGCCTCACCGCCGCGG
CGCTGCTCGCCGACGCCGGACTGCGCGTGAAAGTCTTCGAGCAGCACGTCGTCGCCGGCGGCTATTGCCATACTTATTTG
CGCAAGGCGCATCATCGCGGCCGGCCGGTGCTGTACCGCTTCGACGCCGGACCGCACGACTTCTCCGGCGTGCAGCCGGG
CGGGCCGTTCGCGACGCTGCTGCAGCGGCTCGGCGTTGGGAATCGCATCACCTGGGAGCGGGTGACGCACAGCTTCCACA
CCCAGGCGGGCGCGATCGACGTGCCGCCGGACTGGCGCGACTACGTCCGGCTGCTTGGTGAGCGGTTTCCGGCCAGCGCC
GCCGGCATCAAAGAACTGTTCGACGAGATCAAAGCGATCTTCGACGACATGTTCGCGACCGCTGCCAGCCGCGGCGGCGT
GCCCGGGATGCCGTCGAGCATCGATGAGCTGCTCGCGTTTCCGCGCAATCACCCGCACGCCTATCGCTGGATGAACCGGC
CGTTCGCCGAACTGGTAGCCGCCCACGTCCAGGATCCCGCGGCAGTCGCCTTCATCAACGGCCTCGCCGGCTATATCGGT
GACGGCAGCGAGCCGTCGACCTGCGCCCGGATGGTGCCGATCTTCGGCTATTACTTCCACGGCGGCTACTATCCGCGCGG
CGGCTCAAGCGTTGTCTCGGGCGCGCTGGTCGCGGCGATCGAGGCGCGCGGCGGCGAGGTGAAGCTCAAGACGCCGGTGG
CGCGCATCCTCGTTGAGAACGAAGCGGCCGCCGGCGTGGTGCTCGGCAATGGGGCGACGGTGCGGGCCCGCGCGGTGATC
TCCAATGCCGACCTGAAGCACACGCTGCTCGACCTCGTCCCATCCGAGGCGCTGCCGCAGGATGCCCGGCGCTGGATCAC
CGAGGCGGCGCCGGCGAACTCGTGCTTCAGTGTCCACCTCGGCCTCGACTGCGTGCCGGACATCCGCCCGTCGGTGCATC
TGCACGCGCCGATGCGGGTCGGGCTGGCGATGATGTCGAAGCTCGACCCAACCGCCGCACCAGCGGGGCACTCGATCCTG
TCGCTGATTCATCTGGTGCCACACGCGGAGGCGAAAAGCTGGTTTCCGCCGGAGCCCGAACACGACTGGAAATCCTGGCG
GCGTTCGGAGGCGTATCTGCGCCGCAAGCAGGAGCTCGGCGACCGCATGATCGCGGCGGCCGAAACCGTGATCCCGAACC
TGTCGCAGCACATCGTGTACCGTACCGATGCGAGCCCGGTGACCTACGCGCGCTACGATTGGGCCAGCTTCGGTTCGATC
TACGGCATGTCGACCGCCGGGCAGCTCAAAGGCTCGAAGTCGCCGCTGCGCAATCTGGTCATCGCGGGCGGCGGCAATAT
CGGCGCCGGGATCGAGGCCGTGGTGATATCAGGCGCCGAGGCTGTCGAAGCGCTGATGCCAGGCCTGCTGGCGAGCGCGC
AACCGGTCGCAAGCGAGCCCGCCGCGGCTACGAGGCCGGAGTTGATGCCGGCGTAA

Upstream 100 bases:

>100_bases
ACCATTCAGTACCAGATGTGATAAGGTTGGTACCGAGTGGTACCGCAAGCTGGACCGACTTCAAAGCCGGTTTTTAGCGG
ACCTGAGCCCCGGAGGCAGC

Downstream 100 bases:

>100_bases
CGGCGATCACTCGTAGCTCGCTGATACAAGGGTGGGTTAGGCGCTCTTGCGCCGTAACCCACCATCTTCGCGCGGCGACG
TGAATCGGTGGGTTACGCGC

Product: amine oxidase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 711; Mature: 711

Protein sequence:

>711_residues
MKTFLTVKLVLVPFAVFWALLALHQPSWAIWLGLGLSLAGNAWRAYRRELFVLEAGGLVLFAALAALSLIAPAVAASNAL
WLSFAGLAGISALSLAAKRPWTSDYSRAAHPDNADTPQFFLVNAAITALWAVLFGAIAACRYIDAPGEVITAIVSVGALI
SIFGPKAAIHLILNRMAASRESYRWPTPSFAPFEVQDCDVVIIGAGIGGLTAAALLADAGLRVKVFEQHVVAGGYCHTYL
RKAHHRGRPVLYRFDAGPHDFSGVQPGGPFATLLQRLGVGNRITWERVTHSFHTQAGAIDVPPDWRDYVRLLGERFPASA
AGIKELFDEIKAIFDDMFATAASRGGVPGMPSSIDELLAFPRNHPHAYRWMNRPFAELVAAHVQDPAAVAFINGLAGYIG
DGSEPSTCARMVPIFGYYFHGGYYPRGGSSVVSGALVAAIEARGGEVKLKTPVARILVENEAAAGVVLGNGATVRARAVI
SNADLKHTLLDLVPSEALPQDARRWITEAAPANSCFSVHLGLDCVPDIRPSVHLHAPMRVGLAMMSKLDPTAAPAGHSIL
SLIHLVPHAEAKSWFPPEPEHDWKSWRRSEAYLRRKQELGDRMIAAAETVIPNLSQHIVYRTDASPVTYARYDWASFGSI
YGMSTAGQLKGSKSPLRNLVIAGGGNIGAGIEAVVISGAEAVEALMPGLLASAQPVASEPAAATRPELMPA

Sequences:

>Translated_711_residues
MKTFLTVKLVLVPFAVFWALLALHQPSWAIWLGLGLSLAGNAWRAYRRELFVLEAGGLVLFAALAALSLIAPAVAASNAL
WLSFAGLAGISALSLAAKRPWTSDYSRAAHPDNADTPQFFLVNAAITALWAVLFGAIAACRYIDAPGEVITAIVSVGALI
SIFGPKAAIHLILNRMAASRESYRWPTPSFAPFEVQDCDVVIIGAGIGGLTAAALLADAGLRVKVFEQHVVAGGYCHTYL
RKAHHRGRPVLYRFDAGPHDFSGVQPGGPFATLLQRLGVGNRITWERVTHSFHTQAGAIDVPPDWRDYVRLLGERFPASA
AGIKELFDEIKAIFDDMFATAASRGGVPGMPSSIDELLAFPRNHPHAYRWMNRPFAELVAAHVQDPAAVAFINGLAGYIG
DGSEPSTCARMVPIFGYYFHGGYYPRGGSSVVSGALVAAIEARGGEVKLKTPVARILVENEAAAGVVLGNGATVRARAVI
SNADLKHTLLDLVPSEALPQDARRWITEAAPANSCFSVHLGLDCVPDIRPSVHLHAPMRVGLAMMSKLDPTAAPAGHSIL
SLIHLVPHAEAKSWFPPEPEHDWKSWRRSEAYLRRKQELGDRMIAAAETVIPNLSQHIVYRTDASPVTYARYDWASFGSI
YGMSTAGQLKGSKSPLRNLVIAGGGNIGAGIEAVVISGAEAVEALMPGLLASAQPVASEPAAATRPELMPA
>Mature_711_residues
MKTFLTVKLVLVPFAVFWALLALHQPSWAIWLGLGLSLAGNAWRAYRRELFVLEAGGLVLFAALAALSLIAPAVAASNAL
WLSFAGLAGISALSLAAKRPWTSDYSRAAHPDNADTPQFFLVNAAITALWAVLFGAIAACRYIDAPGEVITAIVSVGALI
SIFGPKAAIHLILNRMAASRESYRWPTPSFAPFEVQDCDVVIIGAGIGGLTAAALLADAGLRVKVFEQHVVAGGYCHTYL
RKAHHRGRPVLYRFDAGPHDFSGVQPGGPFATLLQRLGVGNRITWERVTHSFHTQAGAIDVPPDWRDYVRLLGERFPASA
AGIKELFDEIKAIFDDMFATAASRGGVPGMPSSIDELLAFPRNHPHAYRWMNRPFAELVAAHVQDPAAVAFINGLAGYIG
DGSEPSTCARMVPIFGYYFHGGYYPRGGSSVVSGALVAAIEARGGEVKLKTPVARILVENEAAAGVVLGNGATVRARAVI
SNADLKHTLLDLVPSEALPQDARRWITEAAPANSCFSVHLGLDCVPDIRPSVHLHAPMRVGLAMMSKLDPTAAPAGHSIL
SLIHLVPHAEAKSWFPPEPEHDWKSWRRSEAYLRRKQELGDRMIAAAETVIPNLSQHIVYRTDASPVTYARYDWASFGSI
YGMSTAGQLKGSKSPLRNLVIAGGGNIGAGIEAVVISGAEAVEALMPGLLASAQPVASEPAAATRPELMPA

Specific function: This enzyme converts phytoene into lycopene via the intermediaries of phytofluene, zeta-carotene and neurosporene by the introduction of four double bonds [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

Organism=Homo sapiens, GI203098013, Length=537, Percent_Identity=26.0707635009311, Blast_Score=88, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 75906; Mature: 75906

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFLTVKLVLVPFAVFWALLALHQPSWAIWLGLGLSLAGNAWRAYRRELFVLEAGGLVL
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCHHHHHHHHEEEEEECCHHHH
FAALAALSLIAPAVAASNALWLSFAGLAGISALSLAAKRPWTSDYSRAAHPDNADTPQFF
HHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEE
LVNAAITALWAVLFGAIAACRYIDAPGEVITAIVSVGALISIFGPKAAIHLILNRMAASR
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
ESYRWPTPSFAPFEVQDCDVVIIGAGIGGLTAAALLADAGLRVKVFEQHVVAGGYCHTYL
HCCCCCCCCCCCCEECCCCEEEEECCCHHHHHHHHHHCCCCEEEEEHHHHHCCHHHHHHH
RKAHHRGRPVLYRFDAGPHDFSGVQPGGPFATLLQRLGVGNRITWERVTHSFHTQAGAID
HHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCC
VPPDWRDYVRLLGERFPASAAGIKELFDEIKAIFDDMFATAASRGGVPGMPSSIDELLAF
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHC
PRNHPHAYRWMNRPFAELVAAHVQDPAAVAFINGLAGYIGDGSEPSTCARMVPIFGYYFH
CCCCCHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC
GGYYPRGGSSVVSGALVAAIEARGGEVKLKTPVARILVENEAAAGVVLGNGATVRARAVI
CCCCCCCCCHHHHHHHHHHEECCCCEEEEECHHHHHEECCCCCCEEEECCCCEEEEEEEC
SNADLKHTLLDLVPSEALPQDARRWITEAAPANSCFSVHLGLDCVPDIRPSVHLHAPMRV
CCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEECCHHHH
GLAMMSKLDPTAAPAGHSILSLIHLVPHAEAKSWFPPEPEHDWKSWRRSEAYLRRKQELG
HHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
DRMIAAAETVIPNLSQHIVYRTDASPVTYARYDWASFGSIYGMSTAGQLKGSKSPLRNLV
HHHHHHHHHHHCCCHHCEEEECCCCCCEEEECCHHHHCCCCCCCCCCCCCCCCCCCCEEE
IAGGGNIGAGIEAVVISGAEAVEALMPGLLASAQPVASEPAAATRPELMPA
EECCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKTFLTVKLVLVPFAVFWALLALHQPSWAIWLGLGLSLAGNAWRAYRRELFVLEAGGLVL
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCHHHHHHHHEEEEEECCHHHH
FAALAALSLIAPAVAASNALWLSFAGLAGISALSLAAKRPWTSDYSRAAHPDNADTPQFF
HHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEE
LVNAAITALWAVLFGAIAACRYIDAPGEVITAIVSVGALISIFGPKAAIHLILNRMAASR
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
ESYRWPTPSFAPFEVQDCDVVIIGAGIGGLTAAALLADAGLRVKVFEQHVVAGGYCHTYL
HCCCCCCCCCCCCEECCCCEEEEECCCHHHHHHHHHHCCCCEEEEEHHHHHCCHHHHHHH
RKAHHRGRPVLYRFDAGPHDFSGVQPGGPFATLLQRLGVGNRITWERVTHSFHTQAGAID
HHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCC
VPPDWRDYVRLLGERFPASAAGIKELFDEIKAIFDDMFATAASRGGVPGMPSSIDELLAF
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHC
PRNHPHAYRWMNRPFAELVAAHVQDPAAVAFINGLAGYIGDGSEPSTCARMVPIFGYYFH
CCCCCHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC
GGYYPRGGSSVVSGALVAAIEARGGEVKLKTPVARILVENEAAAGVVLGNGATVRARAVI
CCCCCCCCCHHHHHHHHHHEECCCCEEEEECHHHHHEECCCCCCEEEECCCCEEEEEEEC
SNADLKHTLLDLVPSEALPQDARRWITEAAPANSCFSVHLGLDCVPDIRPSVHLHAPMRV
CCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEECCHHHH
GLAMMSKLDPTAAPAGHSILSLIHLVPHAEAKSWFPPEPEHDWKSWRRSEAYLRRKQELG
HHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
DRMIAAAETVIPNLSQHIVYRTDASPVTYARYDWASFGSIYGMSTAGQLKGSKSPLRNLV
HHHHHHHHHHHCCCHHCEEEECCCCCCEEEECCHHHHCCCCCCCCCCCCCCCCCCCCEEE
IAGGGNIGAGIEAVVISGAEAVEALMPGLLASAQPVASEPAAATRPELMPA
EECCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7592436 [H]