Click here to switch to the map view.

The map label for this gene is 192288838

Identifier: 192288838

GI number: 192288838

Start: 436304

End: 436678

Strand: Reverse

Name: 192288838

Synonym: Rpal_0407

Alternate gene names: NA

Gene position: 436678-436304 (Counterclockwise)

Preceding gene: 192288839

Following gene: 192288836

Centisome position: 7.6

GC content: 65.33

Gene sequence:

>375_bases
ATGACGACTGATCACAGCGTGGGGTTCGAACCTGCCGACCGCTTGGCGCAGGATCCTGAACAGGTGCGCCGGCGGTTCTG
GCGCAAGATCAAGAGCGTTGCGGTCCGACTGCCGTTCGTCGAAGACATTCTGGCGGCGTATTACTGCGCGTTCGACCGGC
AGACACCGCGGCACGTCCAGATCGCGCTGCTCGGCGCGATCGCTTACTTCATCCTGCCGTTCGATTTCCTGCCCGACATT
CTGCCGGTGCTTGGCTTCACCGACGACGCCGCGATCCTCGCCACCGCACTGCGGATGGTCGCCAGCAACATCACGCCCGA
ACACCGCGAAGCCGCGCGCGCAGCGATGCAGCGCGGGCTGGAGGACGAGGCGTAG

Upstream 100 bases:

>100_bases
CGCTGCGGCGCGCGATGACGCGCCGCCTTGCGAGGACGCGGACCGATCACCAGATTCGGCGGGACCGCCAAAACGGGTTC
GCGGCCGCTGGAGTACTTCA

Downstream 100 bases:

>100_bases
AACGCTGCCGAACGGCCTCAGGCCGGCTCGATCATCCGCGCCAGCACCTGCGTCGCCAGCGCTGCCCGCTGCGCAATCGC
ATCCGCGCCGATCGGCGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MTTDHSVGFEPADRLAQDPEQVRRRFWRKIKSVAVRLPFVEDILAAYYCAFDRQTPRHVQIALLGAIAYFILPFDFLPDI
LPVLGFTDDAAILATALRMVASNITPEHREAARAAMQRGLEDEA

Sequences:

>Translated_124_residues
MTTDHSVGFEPADRLAQDPEQVRRRFWRKIKSVAVRLPFVEDILAAYYCAFDRQTPRHVQIALLGAIAYFILPFDFLPDI
LPVLGFTDDAAILATALRMVASNITPEHREAARAAMQRGLEDEA
>Mature_123_residues
TTDHSVGFEPADRLAQDPEQVRRRFWRKIKSVAVRLPFVEDILAAYYCAFDRQTPRHVQIALLGAIAYFILPFDFLPDIL
PVLGFTDDAAILATALRMVASNITPEHREAARAAMQRGLEDEA

Specific function: Unknown

COG id: COG3339

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13999; Mature: 13868

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTDHSVGFEPADRLAQDPEQVRRRFWRKIKSVAVRLPFVEDILAAYYCAFDRQTPRHVQ
CCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHH
IALLGAIAYFILPFDFLPDILPVLGFTDDAAILATALRMVASNITPEHREAARAAMQRGL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
EDEA
CCCC
>Mature Secondary Structure 
TTDHSVGFEPADRLAQDPEQVRRRFWRKIKSVAVRLPFVEDILAAYYCAFDRQTPRHVQ
CCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHH
IALLGAIAYFILPFDFLPDILPVLGFTDDAAILATALRMVASNITPEHREAARAAMQRGL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
EDEA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA