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The map label for this gene is alsB [C]

Identifier: 190895039

GI number: 190895039

Start: 764552

End: 765499

Strand: Reverse

Name: alsB [C]

Synonym: RHECIAT_PC0000705

Alternate gene names: 190895039

Gene position: 765499-764552 (Counterclockwise)

Preceding gene: 190895041

Following gene: 190895038

Centisome position: 70.13

GC content: 60.34

Gene sequence:

>948_bases
ATGAAATTAGGTTTGAAATCGCTTTTCGCAGGCGCCGCCGCTGTAGTTGCGCTCATGTGCTCTTCAGCAATTGTCAACGC
AGCGGACATTCGCATCGTGGCCGTCACCCACGGTCAGGCAAATGACCCGTTCTGGTCCGTGGTCAAGAACGGCGTCAACG
CAGCTGCGAAGGATATCGGCATCAGCGTCGACTATCGGGCGCCGGAGACATTCGACATGGTGTCGATGGGGCAGCTCATC
GATGCTGCCATCAATCAGAAGCCCGACGGGCTTGTCGTCTCCATTCCGGACGCCTCGGCGCTCGGTCCGTCGATCAAGAA
GGCCGTGGCCGCCGGCATTCCGGTTATATCGATCAACTCGGGATCCGATGTTTCGAAGGAATTGGGAGCGCTTCTGCATG
TCGGCCAGGACGAATACACCGCGGGCAAGGCCGCCGGTGCGAAGCTGCATGAACTGGGCGGCAAGGAAGGCTTGTGCGTC
AATCAGGAGGTCGGCAATGTCGCGCTCGATCTGCGCTGCAAGGGCTTTGCCGACGGTTTTGGCGGCAAGGTCACGGTTCT
GCCCGTCAGCAACGACCCTGCCGACGTCCGGTCGAAGGTCAAAGCGGCGCTGAGTTCAAATGCCGCTGTCGATACCGTCA
TGGCGCTCGGCGCCGGCACCGCCGGTGAGCCGGCTCTGGCGGCTGTCGAGGATGTTGGAATGACCGGCAAGATTAATGTC
GCGACCTTCGACCTGTCGGCAGATTTCCTGAAGGCCGTGGCCGACGGCAAGGCAGCCTTCGCGATCGATCAACAGCAGTT
CCTGCAGGGTTATCTGCCGGTCGTATTCCTGGCCAACTACGCCAAATACGGGCTGATCCCAGGCGGCAACGTTCCGTCTG
GGCCGAACTTGATCACCAAGGAAAAGGCTGCCCAGGTTGTGGATCTCTCCGCCAAGGGCATTCGCTGA

Upstream 100 bases:

>100_bases
ACAATAAAGTAATTTGGCGTCGCTTGCTACCGGTAGCAATGAGGTTGCAACCGGTAGCAAATGCGGTTCGCATGAGGCGG
ACTGTTTTTGGGAGGGTAAA

Downstream 100 bases:

>100_bases
CCAGAATTGCCGGAAGGCATTCTCGAGAATCTCCTCCCCTCGAGGGGAGGGGGTTCGGTTGAAAGAGCGCTGCCGAGCAG
CGCCGCCGCTACCTCAAAAC

Product: putative sugar ABC transporter substrate-binding protein

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: ABC-Type Sugar Transport System; Ribose ABC Transporter; ABC-Type Sugar Transport System Periplasmic Component; Sugar ABC Transporter Periplasmic Component-Like Protein; Twin-Arginine Translocation Pathway Signal; ABC Transporter; Sugar ABC Transporter Periplasmic Protein; Sugar Regulator; Lipoprotein

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MKLGLKSLFAGAAAVVALMCSSAIVNAADIRIVAVTHGQANDPFWSVVKNGVNAAAKDIGISVDYRAPETFDMVSMGQLI
DAAINQKPDGLVVSIPDASALGPSIKKAVAAGIPVISINSGSDVSKELGALLHVGQDEYTAGKAAGAKLHELGGKEGLCV
NQEVGNVALDLRCKGFADGFGGKVTVLPVSNDPADVRSKVKAALSSNAAVDTVMALGAGTAGEPALAAVEDVGMTGKINV
ATFDLSADFLKAVADGKAAFAIDQQQFLQGYLPVVFLANYAKYGLIPGGNVPSGPNLITKEKAAQVVDLSAKGIR

Sequences:

>Translated_315_residues
MKLGLKSLFAGAAAVVALMCSSAIVNAADIRIVAVTHGQANDPFWSVVKNGVNAAAKDIGISVDYRAPETFDMVSMGQLI
DAAINQKPDGLVVSIPDASALGPSIKKAVAAGIPVISINSGSDVSKELGALLHVGQDEYTAGKAAGAKLHELGGKEGLCV
NQEVGNVALDLRCKGFADGFGGKVTVLPVSNDPADVRSKVKAALSSNAAVDTVMALGAGTAGEPALAAVEDVGMTGKINV
ATFDLSADFLKAVADGKAAFAIDQQQFLQGYLPVVFLANYAKYGLIPGGNVPSGPNLITKEKAAQVVDLSAKGIR
>Mature_315_residues
MKLGLKSLFAGAAAVVALMCSSAIVNAADIRIVAVTHGQANDPFWSVVKNGVNAAAKDIGISVDYRAPETFDMVSMGQLI
DAAINQKPDGLVVSIPDASALGPSIKKAVAAGIPVISINSGSDVSKELGALLHVGQDEYTAGKAAGAKLHELGGKEGLCV
NQEVGNVALDLRCKGFADGFGGKVTVLPVSNDPADVRSKVKAALSSNAAVDTVMALGAGTAGEPALAAVEDVGMTGKINV
ATFDLSADFLKAVADGKAAFAIDQQQFLQGYLPVVFLANYAKYGLIPGGNVPSGPNLITKEKAAQVVDLSAKGIR

Specific function: Part Of The Binding-Protein-Dependent Transport System Alsbac For D-Allose. [C]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31986; Mature: 31986

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGLKSLFAGAAAVVALMCSSAIVNAADIRIVAVTHGQANDPFWSVVKNGVNAAAKDIG
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCC
ISVDYRAPETFDMVSMGQLIDAAINQKPDGLVVSIPDASALGPSIKKAVAAGIPVISINS
EEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHCCHHHHHHHHCCCCEEEECC
GSDVSKELGALLHVGQDEYTAGKAAGAKLHELGGKEGLCVNQEVGNVALDLRCKGFADGF
CCCHHHHHHHHHCCCCCCCCCCHHCCCHHHHCCCCCCEEECCCCCCEEEEEEECCCCCCC
GGKVTVLPVSNDPADVRSKVKAALSSNAAVDTVMALGAGTAGEPALAAVEDVGMTGKINV
CCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEE
ATFDLSADFLKAVADGKAAFAIDQQQFLQGYLPVVFLANYAKYGLIPGGNVPSGPNLITK
EEEECCHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEH
EKAAQVVDLSAKGIR
HHHHHEEECCCCCCC
>Mature Secondary Structure
MKLGLKSLFAGAAAVVALMCSSAIVNAADIRIVAVTHGQANDPFWSVVKNGVNAAAKDIG
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCC
ISVDYRAPETFDMVSMGQLIDAAINQKPDGLVVSIPDASALGPSIKKAVAAGIPVISINS
EEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHCCHHHHHHHHCCCCEEEECC
GSDVSKELGALLHVGQDEYTAGKAAGAKLHELGGKEGLCVNQEVGNVALDLRCKGFADGF
CCCHHHHHHHHHCCCCCCCCCCHHCCCHHHHCCCCCCEEECCCCCCEEEEEEECCCCCCC
GGKVTVLPVSNDPADVRSKVKAALSSNAAVDTVMALGAGTAGEPALAAVEDVGMTGKINV
CCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEE
ATFDLSADFLKAVADGKAAFAIDQQQFLQGYLPVVFLANYAKYGLIPGGNVPSGPNLITK
EEEECCHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEH
EKAAQVVDLSAKGIR
HHHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA