Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
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Accession | NC_010997 |
Length | 1,091,523 |
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The map label for this gene is 190895041
Identifier: 190895041
GI number: 190895041
Start: 766678
End: 767511
Strand: Reverse
Name: 190895041
Synonym: RHECIAT_PC0000707
Alternate gene names: NA
Gene position: 767511-766678 (Counterclockwise)
Preceding gene: 190895043
Following gene: 190895039
Centisome position: 70.32
GC content: 60.55
Gene sequence:
>834_bases ATGCGGGACTATGCCAAGGAATTGCCCGAGCACAGGGAAAAATTTATCGGAGAGAACGACCTTTTTCTTGAGATATTTCA TGGGAACTGTGGCTCGCAAAAAGCCGGCCGGCCGCCGCTGCTGTTCGTCCATGGGGCCTTCACCGGCAGCTGGATGTGGA GCAAGTACATCCCGCATTTCATGGCCGCAGGATGGGACTCCTCCTGCATCAATCTGCGCGGTCACTACAAAAGCAGATCG GTCGATTTCACGCAGGTCGAATTCGAGGATTATCTCGAAGACATTCGAGAGGCGATCGCCGAAGTCGTCGATGAAAGCGG AAGCCCGCCTGTGGTGATCGGCTTCAGTATGGGCGGCATCCTCAGCCAGAAACTGGCGGAAAGCGTGGAGATCGCTGGGC TGGTGCTGATCGACTCCAGCATCTGCAGGCAAGTGCATGACGCGGTGCCCTATCAAGGTCGCGCGCCGCGGGCGCCCGGT CTCGTCGTGCCCGCGCCGGCGCGCGACGAGCAGTTCAGCGCCGATGAGACCTTCGAAGATCTCGCGTTCCAGCGGAAATA CCTGTCCATGGAGTCCGGCAAGGCTTTCGGCGCCTTCTCCTTTCATTTCGGAGCGCAGGGAATTTCCGTCGACGGCCGAA GGATCACCTGTCCTAGCCTGGTCATCTCAGCCGTCGGAGATGAAGATGATGACCGGCGCGGCCGGGCGGCGGCGCGGCAC ATCGGCGGCGAATATCTGGGTCTTGCCGGCACGACGCATACGGGCTTGCTGGTCGGGCAACGATATCACGAGGCGGTCAG ACGCATCTTGGACTGGCTGGCGCGCTTCCCCTGA
Upstream 100 bases:
>100_bases ATTTTGTCCTTTGTGTAAGTCCATCTGCAGTGATTGATCAACATTGCGTAACAAATATCCTCTGTCTCGGATAGCTTGCC CAACTTGAGGAGCGAATGCC
Downstream 100 bases:
>100_bases AACCCGGCAATCAGGCGGATAGTCTGGGAACGAGATGACCTGGCAAGGTGACAGCTTCGACGGCACGGGCTCCGGTAATC ATCTCCACTATCGTGTTAAT
Product: putative hydrolase
Products: NA
Alternate protein names: Hydrolase Protein; Alpha/Beta Hydrolase Fold Protein; Acetone-Cyanohydrin Lyase; Hydrolase Or Acyltransferase; Alpha/Beta Hydrolase; Hydrolase Alpha/Beta Hydrolase Fold Family; Hydrolase
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MRDYAKELPEHREKFIGENDLFLEIFHGNCGSQKAGRPPLLFVHGAFTGSWMWSKYIPHFMAAGWDSSCINLRGHYKSRS VDFTQVEFEDYLEDIREAIAEVVDESGSPPVVIGFSMGGILSQKLAESVEIAGLVLIDSSICRQVHDAVPYQGRAPRAPG LVVPAPARDEQFSADETFEDLAFQRKYLSMESGKAFGAFSFHFGAQGISVDGRRITCPSLVISAVGDEDDDRRGRAAARH IGGEYLGLAGTTHTGLLVGQRYHEAVRRILDWLARFP
Sequences:
>Translated_277_residues MRDYAKELPEHREKFIGENDLFLEIFHGNCGSQKAGRPPLLFVHGAFTGSWMWSKYIPHFMAAGWDSSCINLRGHYKSRS VDFTQVEFEDYLEDIREAIAEVVDESGSPPVVIGFSMGGILSQKLAESVEIAGLVLIDSSICRQVHDAVPYQGRAPRAPG LVVPAPARDEQFSADETFEDLAFQRKYLSMESGKAFGAFSFHFGAQGISVDGRRITCPSLVISAVGDEDDDRRGRAAARH IGGEYLGLAGTTHTGLLVGQRYHEAVRRILDWLARFP >Mature_277_residues MRDYAKELPEHREKFIGENDLFLEIFHGNCGSQKAGRPPLLFVHGAFTGSWMWSKYIPHFMAAGWDSSCINLRGHYKSRS VDFTQVEFEDYLEDIREAIAEVVDESGSPPVVIGFSMGGILSQKLAESVEIAGLVLIDSSICRQVHDAVPYQGRAPRAPG LVVPAPARDEQFSADETFEDLAFQRKYLSMESGKAFGAFSFHFGAQGISVDGRRITCPSLVISAVGDEDDDRRGRAAARH IGGEYLGLAGTTHTGLLVGQRYHEAVRRILDWLARFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30681; Mature: 30681
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDYAKELPEHREKFIGENDLFLEIFHGNCGSQKAGRPPLLFVHGAFTGSWMWSKYIPHF CCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHH MAAGWDSSCINLRGHYKSRSVDFTQVEFEDYLEDIREAIAEVVDESGSPPVVIGFSMGGI HHCCCCCCEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHH LSQKLAESVEIAGLVLIDSSICRQVHDAVPYQGRAPRAPGLVVPAPARDEQFSADETFED HHHHHHHHHHHHEEEEECHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHH LAFQRKYLSMESGKAFGAFSFHFGAQGISVDGRRITCPSLVISAVGDEDDDRRGRAAARH HHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEHHHHHHHHCCCCCCHHHHHHHHHH IGGEYLGLAGTTHTGLLVGQRYHEAVRRILDWLARFP CCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRDYAKELPEHREKFIGENDLFLEIFHGNCGSQKAGRPPLLFVHGAFTGSWMWSKYIPHF CCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHH MAAGWDSSCINLRGHYKSRSVDFTQVEFEDYLEDIREAIAEVVDESGSPPVVIGFSMGGI HHCCCCCCEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHH LSQKLAESVEIAGLVLIDSSICRQVHDAVPYQGRAPRAPGLVVPAPARDEQFSADETFED HHHHHHHHHHHHEEEEECHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHH LAFQRKYLSMESGKAFGAFSFHFGAQGISVDGRRITCPSLVISAVGDEDDDRRGRAAARH HHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEHHHHHHHHCCCCCCHHHHHHHHHH IGGEYLGLAGTTHTGLLVGQRYHEAVRRILDWLARFP CCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA