Definition Rhizobium etli CIAT 652 plasmid pC, complete sequence.
Accession NC_010997
Length 1,091,523

Click here to switch to the map view.

The map label for this gene is 190894963

Identifier: 190894963

GI number: 190894963

Start: 680302

End: 680553

Strand: Reverse

Name: 190894963

Synonym: RHECIAT_PC0000628

Alternate gene names: NA

Gene position: 680553-680302 (Counterclockwise)

Preceding gene: 190894964

Following gene: 190894960

Centisome position: 62.35

GC content: 59.13

Gene sequence:

>252_bases
GTGCCTGAAAGCCTCGCCCGAAGCTCTGCCACCAGCCATCTCGCTGCGGGCCCGGGCGGGGTTGCGTATCACGTGAATCG
GATATCCATCCTGATCGAAGGCAGAAAACTTGAGATGGACGAGACGGCCATCGGCAAGGTCGTCCGCCCCGCGGATAAGG
AACGACCGCTTGCGAGTTCGCTTCGAAGCACGGCGAGCGGGATTTCATTTCGCCGGTTCTTAAGCTGCAGAACTGACCGG
TTCTCAATTTGA

Upstream 100 bases:

>100_bases
TTGACGGGCAAATCTGCCACAAGCATGATGCGCTAGCCATCAGACGTCGATTTCGCTGGCACGGTGTTCGAATCCGTCCT
CATGTCCTCGATCTCGGAAC

Downstream 100 bases:

>100_bases
CGGTTGCGTTATCCGAATTTCGCAATGTTGTCCGATCGGCGCAGCAAAGCTTGGAACTGAGCCGTGCGCAGGGGCGAAAG
TAGCAGTTTGTTAAGGTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 82

Protein sequence:

>83_residues
MPESLARSSATSHLAAGPGGVAYHVNRISILIEGRKLEMDETAIGKVVRPADKERPLASSLRSTASGISFRRFLSCRTDR
FSI

Sequences:

>Translated_83_residues
MPESLARSSATSHLAAGPGGVAYHVNRISILIEGRKLEMDETAIGKVVRPADKERPLASSLRSTASGISFRRFLSCRTDR
FSI
>Mature_82_residues
PESLARSSATSHLAAGPGGVAYHVNRISILIEGRKLEMDETAIGKVVRPADKERPLASSLRSTASGISFRRFLSCRTDRF
SI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9001; Mature: 8870

Theoretical pI: Translated: 10.99; Mature: 10.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPESLARSSATSHLAAGPGGVAYHVNRISILIEGRKLEMDETAIGKVVRPADKERPLASS
CCCHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCHHHHHHCCCCCCCCHHHHH
LRSTASGISFRRFLSCRTDRFSI
HHHHHCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PESLARSSATSHLAAGPGGVAYHVNRISILIEGRKLEMDETAIGKVVRPADKERPLASS
CCHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCHHHHHHCCCCCCCCHHHHH
LRSTASGISFRRFLSCRTDRFSI
HHHHHCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA