Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
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Accession | NC_010997 |
Length | 1,091,523 |
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The map label for this gene is 190894964
Identifier: 190894964
GI number: 190894964
Start: 683215
End: 683508
Strand: Reverse
Name: 190894964
Synonym: RHECIAT_PC0000630
Alternate gene names: NA
Gene position: 683508-683215 (Counterclockwise)
Preceding gene: 190894965
Following gene: 190894963
Centisome position: 62.62
GC content: 61.22
Gene sequence:
>294_bases TTGGATCAGTCTCCGCCGGGCCGATGCGCGCGCCGTTCGGCCGACACGTGCAAGCGGCCGCGGCGACGTAAACCGAAAGG CTGCTTCTGCCTGAAAGTGGGACTATCCACATTGCGCGCTGGCGATCCGGATCGCGCGCCGAAAGTTGCCGCGCCGCAGA AGGCGGAGCGATCTCTTAATTTTCTCGCCGCAGTATCAGCAGCCAAGCGACGTGCTTCGATTGCGGCCACGTCTTCGTCG GTTACGCCTCAAATGACTTGGGCGGCTTTCTCGGAAGAATATTCAGCCGGATGA
Upstream 100 bases:
>100_bases CGAAAAAAGCAATGAAACCAGTTCCTTGCGGAAAAGCTGATACGAAAAAATCGCGATCTGGCTAGGTTCTTCGGATTCCG GATAAGGCGTATGTCCGGCT
Downstream 100 bases:
>100_bases ATGATGCATCAGGCTGTCGCCCACGGTGAGTCAATCCATGATGAAGTCGTCGTCCCAATCGTCTCGGAACCCTGTTCCCG TTCCGGAAACGCACGGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MDQSPPGRCARRSADTCKRPRRRKPKGCFCLKVGLSTLRAGDPDRAPKVAAPQKAERSLNFLAAVSAAKRRASIAATSSS VTPQMTWAAFSEEYSAG
Sequences:
>Translated_97_residues MDQSPPGRCARRSADTCKRPRRRKPKGCFCLKVGLSTLRAGDPDRAPKVAAPQKAERSLNFLAAVSAAKRRASIAATSSS VTPQMTWAAFSEEYSAG >Mature_97_residues MDQSPPGRCARRSADTCKRPRRRKPKGCFCLKVGLSTLRAGDPDRAPKVAAPQKAERSLNFLAAVSAAKRRASIAATSSS VTPQMTWAAFSEEYSAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10411; Mature: 10411
Theoretical pI: Translated: 11.31; Mature: 11.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQSPPGRCARRSADTCKRPRRRKPKGCFCLKVGLSTLRAGDPDRAPKVAAPQKAERSLN CCCCCCCHHHHCCCHHHHCCCCCCCCCEEEHCCCHHHHCCCCCCCCCCCCCCCHHHHHHH FLAAVSAAKRRASIAATSSSVTPQMTWAAFSEEYSAG HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MDQSPPGRCARRSADTCKRPRRRKPKGCFCLKVGLSTLRAGDPDRAPKVAAPQKAERSLN CCCCCCCHHHHCCCHHHHCCCCCCCCCEEEHCCCHHHHCCCCCCCCCCCCCCCHHHHHHH FLAAVSAAKRRASIAATSSSVTPQMTWAAFSEEYSAG HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA