| Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
|---|---|
| Accession | NC_010981 |
| Length | 1,482,455 |
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The map label for this gene is tgt [H]
Identifier: 190570999
GI number: 190570999
Start: 636038
End: 637249
Strand: Direct
Name: tgt [H]
Synonym: WPa_0589
Alternate gene names: 190570999
Gene position: 636038-637249 (Clockwise)
Preceding gene: 190570998
Following gene: 190571002
Centisome position: 42.9
GC content: 37.38
Gene sequence:
>1212_bases ATGGAAAAGTTCTCGTTTAGGATAACTAAGCAATCAGGTTCTGCAAGAGTTGGAACGATCAAAACTCCAAATGGAAGTAT AGAAACACCAGCATTTATATTTTGTGCAACCAAAGCTGCTATTAAAGCTGCAGATATCGAGAGAATCAGAGAAGCAGGTA CTCAGATAATACTTTCCAACACCTATCACCTAATGCTCCAACCGGGAGAGGATACTGTGGCAAAGCTTGGTGGCTTGCAC AAGATGATGGGATGGAGTGGGCCAATGCTCACTGATTCTGGTGGATACCAGATATTTAGTTTAGGGCACGGGTCAGTTTC GGAAGAAATAAAGGGAATAAGACAGAAGCAAAAAACTCTGATCAAAATTAACGAGGATGGGGCAATTTTTCGTTCTTACA TAAATGGTAAAACTTATTGTCTAACTCCTGAAAAGTCGATACAAATTCAACAAAAATTAGGTGCAGATTTAATCCTAGTT TTAGATGAATGTACTCCATTCCATGTCAGTAAAGAATACACAAGAAAATCAATGCTCATGAGCCATAGATGGGCTGAACG TTCTTTAAATAAGTTTGAAAAAAATAATGATGGCAAACAGGCGCTTTATGGAATTAGTCAAGGCGGAGTGTATCAAGATT TGCGTAGAGAAAGTTGTGATTTTATCAACGATTTGCCATTTTTTGGTCAAGCAATAGGTGGATCACTTGGTCAAAGTAAA GAGCAGATGTATGATGTAGTTTCCTTTACTATGGAACATTTAAAAAAAGATAGGCCTACTCATTTGCTTGGTATTGGTGG AATTGTAGACATTTTTCGTGGAGTAGAGCTTGGAGTTGATACATTTGATTGCGTGCATCCAACTCGCCTCGCAAGACATG GTGGCGCGCTTGTTAAAGTAAAAAACAGAGATTCTATTTCTTCAAAGCGTAAAGAGCATATTAATTTGCGAAATCAACGA TTCGAACTAGATGATAACCCAATTGAAAATGACTGTTTGTGCTTTACTTGCAGAAAACATTCAAGAGCCTATATACACCA TCTACTGAAAGCTAAAGAGTTGCTGGCTTATACACTCGTTACCATTCACAATGTTTTCTTCATGAATAAGTTGATGGAAT CAATAAGACAAGCAATATTGAATGATAGGCTAGATCAGGAAAAAAATAATTGGATTAGTGAAATACCGCTGCATTGTGAA CTATATACCTAG
Upstream 100 bases:
>100_bases ATGCGTTAATGCCCCTGTGGTGCAGATCAATAATGACTTTTATGAAAACCTCACTCCTGAAAAAGTGGAAAATATCATAG CAGAACTTTCAAGTAAATAG
Downstream 100 bases:
>100_bases TTCATATTTTGTACATGTGCGTTGCATTTTTTAATCTTCTTTAAAAACTTGACAGTACCGTATATATACGGGTATACTAA AAATATAATTTTGTGAGGCA
Product: queuine tRNA-ribosyltransferase
Products: NA
Alternate protein names: Guanine insertion enzyme; tRNA-guanine transglycosylase [H]
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MEKFSFRITKQSGSARVGTIKTPNGSIETPAFIFCATKAAIKAADIERIREAGTQIILSNTYHLMLQPGEDTVAKLGGLH KMMGWSGPMLTDSGGYQIFSLGHGSVSEEIKGIRQKQKTLIKINEDGAIFRSYINGKTYCLTPEKSIQIQQKLGADLILV LDECTPFHVSKEYTRKSMLMSHRWAERSLNKFEKNNDGKQALYGISQGGVYQDLRRESCDFINDLPFFGQAIGGSLGQSK EQMYDVVSFTMEHLKKDRPTHLLGIGGIVDIFRGVELGVDTFDCVHPTRLARHGGALVKVKNRDSISSKRKEHINLRNQR FELDDNPIENDCLCFTCRKHSRAYIHHLLKAKELLAYTLVTIHNVFFMNKLMESIRQAILNDRLDQEKNNWISEIPLHCE LYT
Sequences:
>Translated_403_residues MEKFSFRITKQSGSARVGTIKTPNGSIETPAFIFCATKAAIKAADIERIREAGTQIILSNTYHLMLQPGEDTVAKLGGLH KMMGWSGPMLTDSGGYQIFSLGHGSVSEEIKGIRQKQKTLIKINEDGAIFRSYINGKTYCLTPEKSIQIQQKLGADLILV LDECTPFHVSKEYTRKSMLMSHRWAERSLNKFEKNNDGKQALYGISQGGVYQDLRRESCDFINDLPFFGQAIGGSLGQSK EQMYDVVSFTMEHLKKDRPTHLLGIGGIVDIFRGVELGVDTFDCVHPTRLARHGGALVKVKNRDSISSKRKEHINLRNQR FELDDNPIENDCLCFTCRKHSRAYIHHLLKAKELLAYTLVTIHNVFFMNKLMESIRQAILNDRLDQEKNNWISEIPLHCE LYT >Mature_403_residues MEKFSFRITKQSGSARVGTIKTPNGSIETPAFIFCATKAAIKAADIERIREAGTQIILSNTYHLMLQPGEDTVAKLGGLH KMMGWSGPMLTDSGGYQIFSLGHGSVSEEIKGIRQKQKTLIKINEDGAIFRSYINGKTYCLTPEKSIQIQQKLGADLILV LDECTPFHVSKEYTRKSMLMSHRWAERSLNKFEKNNDGKQALYGISQGGVYQDLRRESCDFINDLPFFGQAIGGSLGQSK EQMYDVVSFTMEHLKKDRPTHLLGIGGIVDIFRGVELGVDTFDCVHPTRLARHGGALVKVKNRDSISSKRKEHINLRNQR FELDDNPIENDCLCFTCRKHSRAYIHHLLKAKELLAYTLVTIHNVFFMNKLMESIRQAILNDRLDQEKNNWISEIPLHCE LYT
Specific function: Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hyper
COG id: COG0343
COG function: function code J; Queuine/archaeosine tRNA-ribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queuine tRNA-ribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI13654276, Length=371, Percent_Identity=37.7358490566038, Blast_Score=255, Evalue=4e-68, Organism=Homo sapiens, GI13375872, Length=222, Percent_Identity=27.027027027027, Blast_Score=84, Evalue=2e-16, Organism=Escherichia coli, GI1786607, Length=381, Percent_Identity=39.6325459317585, Blast_Score=293, Evalue=1e-80, Organism=Caenorhabditis elegans, GI17544680, Length=382, Percent_Identity=34.8167539267016, Blast_Score=226, Evalue=2e-59, Organism=Caenorhabditis elegans, GI25146502, Length=235, Percent_Identity=26.8085106382979, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI19920510, Length=373, Percent_Identity=36.1930294906166, Blast_Score=244, Evalue=1e-64, Organism=Drosophila melanogaster, GI21355311, Length=148, Percent_Identity=28.3783783783784, Blast_Score=80, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004803 - InterPro: IPR002616 [H]
Pfam domain/function: PF01702 TGT [H]
EC number: =2.4.2.29 [H]
Molecular weight: Translated: 45645; Mature: 45645
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKFSFRITKQSGSARVGTIKTPNGSIETPAFIFCATKAAIKAADIERIREAGTQIILSN CCCCEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCEEEEEC TYHLMLQPGEDTVAKLGGLHKMMGWSGPMLTDSGGYQIFSLGHGSVSEEIKGIRQKQKTL CEEEEEECCCHHHHHHCCHHHHHCCCCCEEECCCCEEEEEECCCCHHHHHHHHHHHCCEE IKINEDGAIFRSYINGKTYCLTPEKSIQIQQKLGADLILVLDECTPFHVSKEYTRKSMLM EEECCCCHHHHHHHCCCEEEECCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHH SHRWAERSLNKFEKNNDGKQALYGISQGGVYQDLRRESCDFINDLPFFGQAIGGSLGQSK HHHHHHHHHHHHHCCCCCHHHHEECCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHH EQMYDVVSFTMEHLKKDRPTHLLGIGGIVDIFRGVELGVDTFDCVHPTRLARHGGALVKV HHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCHHCCCCCHHHCCHHHHHHCCCCEEEE KNRDSISSKRKEHINLRNQRFELDDNPIENDCLCFTCRKHSRAYIHHLLKAKELLAYTLV CCCCCHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHH TIHNVFFMNKLMESIRQAILNDRLDQEKNNWISEIPLHCELYT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEECC >Mature Secondary Structure MEKFSFRITKQSGSARVGTIKTPNGSIETPAFIFCATKAAIKAADIERIREAGTQIILSN CCCCEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCEEEEEC TYHLMLQPGEDTVAKLGGLHKMMGWSGPMLTDSGGYQIFSLGHGSVSEEIKGIRQKQKTL CEEEEEECCCHHHHHHCCHHHHHCCCCCEEECCCCEEEEEECCCCHHHHHHHHHHHCCEE IKINEDGAIFRSYINGKTYCLTPEKSIQIQQKLGADLILVLDECTPFHVSKEYTRKSMLM EEECCCCHHHHHHHCCCEEEECCCHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHH SHRWAERSLNKFEKNNDGKQALYGISQGGVYQDLRRESCDFINDLPFFGQAIGGSLGQSK HHHHHHHHHHHHHCCCCCHHHHEECCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHH EQMYDVVSFTMEHLKKDRPTHLLGIGGIVDIFRGVELGVDTFDCVHPTRLARHGGALVKV HHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCHHCCCCCHHHCCHHHHHHCCCCEEEE KNRDSISSKRKEHINLRNQRFELDDNPIENDCLCFTCRKHSRAYIHHLLKAKELLAYTLV CCCCCHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHH TIHNVFFMNKLMESIRQAILNDRLDQEKNNWISEIPLHCELYT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA