| Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
|---|---|
| Accession | NC_010981 |
| Length | 1,482,455 |
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The map label for this gene is ctrA [H]
Identifier: 190570997
GI number: 190570997
Start: 630467
End: 631237
Strand: Direct
Name: ctrA [H]
Synonym: WPa_0585
Alternate gene names: 190570997
Gene position: 630467-631237 (Clockwise)
Preceding gene: 190570992
Following gene: 190570998
Centisome position: 42.53
GC content: 36.84
Gene sequence:
>771_bases ATGCGTATATTATTAATTGAAGATGATCAAGTAAGTGCAAGGACTGTAGTTAATGCCTTAACTTCTGATGGACATTTTTG CGACGTTGTTACTTCTGCACAAGATTATAACAATAATATGGTTTCCTCGGGTGGAGACTGTTACGATCTAGTTATTCTAG ATATACACCTGCCTGGTGATATTGATGGATATGATATACTGTTAAGATTAAGAAGTGCAAAAATCAAAGTTCCTGTTTTA ATACTTTCGTGTATCTCCGCTGCCAACCATAAAGCTAAAGGACTTGGGTATGGTGCCGACGATTACTTAACCAAGCCATT TCACAAGAGCGAATTATTAGCTCGAATTAAGGCCATAGTCCGACGTACTAAAGGCCATCCCGAATCAGTGATAAAGATTG GTAATATGAATATCAATTTTGATCACAGGATTGTTGAGGTAAAAGGCAAAACAGTTCACCTTACTAACAAAGAGTATTCC ATGATAGAATTGCTGGCATTGCGTAAAGGAGCAGTGTTGACAAAAGAAATGTTTTTAAACCATCTTTACAATGGCTTGGA CGAACCTTCAGACAACAAAATAGTTGATGTTTTTATGTGTAAATTACGTAAAAAACTTGAAAGTGCAAATGACGGAATAA GCCACATAGAAACCGTTTGGGGTAGAGGATATGTTCTAAAAGAGTATGTTGACGATGAAGAATACTCTAGTGTTAATATA AGCGAAAGCAGTAGTGACTATCAAGCAGAACAAGTCAAGGACAGCGCATGA
Upstream 100 bases:
>100_bases ATAAGTGTAATTTCTATTATTCATTAATAAAAATTTGATTTGTTACTTTCCTTGGTTATATATATTACTAAAATTATAAA TTATTTATGGGGTGTAAAAT
Downstream 100 bases:
>100_bases AATGCTTTATTTACTTGTTGATTGAAGAAGCGAAAAGGTAGATTTAGTAAGATAAAAACTAATCCTAAAAGTGAGGTAAC GTGGTCAGTCTTTTAGAACT
Product: two component transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MRILLIEDDQVSARTVVNALTSDGHFCDVVTSAQDYNNNMVSSGGDCYDLVILDIHLPGDIDGYDILLRLRSAKIKVPVL ILSCISAANHKAKGLGYGADDYLTKPFHKSELLARIKAIVRRTKGHPESVIKIGNMNINFDHRIVEVKGKTVHLTNKEYS MIELLALRKGAVLTKEMFLNHLYNGLDEPSDNKIVDVFMCKLRKKLESANDGISHIETVWGRGYVLKEYVDDEEYSSVNI SESSSDYQAEQVKDSA
Sequences:
>Translated_256_residues MRILLIEDDQVSARTVVNALTSDGHFCDVVTSAQDYNNNMVSSGGDCYDLVILDIHLPGDIDGYDILLRLRSAKIKVPVL ILSCISAANHKAKGLGYGADDYLTKPFHKSELLARIKAIVRRTKGHPESVIKIGNMNINFDHRIVEVKGKTVHLTNKEYS MIELLALRKGAVLTKEMFLNHLYNGLDEPSDNKIVDVFMCKLRKKLESANDGISHIETVWGRGYVLKEYVDDEEYSSVNI SESSSDYQAEQVKDSA >Mature_256_residues MRILLIEDDQVSARTVVNALTSDGHFCDVVTSAQDYNNNMVSSGGDCYDLVILDIHLPGDIDGYDILLRLRSAKIKVPVL ILSCISAANHKAKGLGYGADDYLTKPFHKSELLARIKAIVRRTKGHPESVIKIGNMNINFDHRIVEVKGKTVHLTNKEYS MIELLALRKGAVLTKEMFLNHLYNGLDEPSDNKIVDVFMCKLRKKLESANDGISHIETVWGRGYVLKEYVDDEEYSSVNI SESSSDYQAEQVKDSA
Specific function: Essential protein that plays a role in the control of cell division, possibly through the transcriptional regulation of ccrM, rpoD, pleC, minC and ftsZ genes [H]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790552, Length=226, Percent_Identity=38.9380530973451, Blast_Score=147, Evalue=8e-37, Organism=Escherichia coli, GI1789402, Length=228, Percent_Identity=38.1578947368421, Blast_Score=135, Evalue=2e-33, Organism=Escherichia coli, GI1786784, Length=228, Percent_Identity=34.2105263157895, Blast_Score=135, Evalue=4e-33, Organism=Escherichia coli, GI87082012, Length=224, Percent_Identity=35.2678571428571, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI1787375, Length=230, Percent_Identity=31.7391304347826, Blast_Score=118, Evalue=3e-28, Organism=Escherichia coli, GI1789809, Length=232, Percent_Identity=30.6034482758621, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1786911, Length=224, Percent_Identity=32.5892857142857, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1790860, Length=227, Percent_Identity=29.9559471365639, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1786599, Length=226, Percent_Identity=30.9734513274336, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1788394, Length=233, Percent_Identity=29.1845493562232, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI2367329, Length=175, Percent_Identity=32, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1787229, Length=231, Percent_Identity=28.1385281385281, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1790863, Length=232, Percent_Identity=28.0172413793103, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI145693140, Length=197, Percent_Identity=28.4263959390863, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 28619; Mature: 28619
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILLIEDDQVSARTVVNALTSDGHFCDVVTSAQDYNNNMVSSGGDCYDLVILDIHLPGD CEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCHHCCCCCCCCCCCEEEEEEEEEECCCC IDGYDILLRLRSAKIKVPVLILSCISAANHKAKGLGYGADDYLTKPFHKSELLARIKAIV CCHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHH RRTKGHPESVIKIGNMNINFDHRIVEVKGKTVHLTNKEYSMIELLALRKGAVLTKEMFLN HHCCCCCCCEEEECCEEECCCEEEEEEECCEEEEECCCHHHHHHHHHHCCCHHHHHHHHH HLYNGLDEPSDNKIVDVFMCKLRKKLESANDGISHIETVWGRGYVLKEYVDDEEYSSVNI HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEHHHCCCCCCCEEEC SESSSDYQAEQVKDSA CCCCCCHHHHHHCCCC >Mature Secondary Structure MRILLIEDDQVSARTVVNALTSDGHFCDVVTSAQDYNNNMVSSGGDCYDLVILDIHLPGD CEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCHHCCCCCCCCCCCEEEEEEEEEECCCC IDGYDILLRLRSAKIKVPVLILSCISAANHKAKGLGYGADDYLTKPFHKSELLARIKAIV CCHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHH RRTKGHPESVIKIGNMNINFDHRIVEVKGKTVHLTNKEYSMIELLALRKGAVLTKEMFLN HHCCCCCCCEEEECCEEECCCEEEEEEECCEEEEECCCHHHHHHHHHHCCCHHHHHHHHH HLYNGLDEPSDNKIVDVFMCKLRKKLESANDGISHIETVWGRGYVLKEYVDDEEYSSVNI HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEHHHCCCCCCCEEEC SESSSDYQAEQVKDSA CCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA