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The map label for this gene is 18977758

Identifier: 18977758

GI number: 18977758

Start: 1299938

End: 1300657

Strand: Direct

Name: 18977758

Synonym: PF1386

Alternate gene names: NA

Gene position: 1299938-1300657 (Clockwise)

Preceding gene: 18977757

Following gene: 18977761

Centisome position: 68.12

GC content: 40.97

Gene sequence:

>720_bases
ATGCTTGAAAAGGAAAAGAAAATCTTGGCAAAAAGAATTGCTGGTGAGATTGTTTTATCCCCCGACCCAGGAAAGACTAT
GAGAAAATGGAGAGAGATTTTCGGCATAAGCCAAAGTGAACTTGCCGAGTATCTTGGAGTGTCATCTTCTGTTATTAGTG
ATTATGAGGGTGGAAGAAGAAAGAGCCCAGGAGCTTCAACTATAAGGAAGTTTGTTGAGGCTCTTCTGGAGATCGATGAG
AAGAGAGGAGGAAATGTAATTAGAGCGTTTAGTAGAACCCTTGGCGGGGATATTCCAACAAGTGCAATCCTTGATATAAG
GGAATTTAACATTCCAGTCACGGTAAAGGATATTGTAAATGCCGTTAAAGGCGAAATAGTAGCCAACCCAGATTTGATAG
ATAGGAAGATTTACGGATACACTATTGTCGATAGCATTCAGGCTATCCTGGAGATGTCTGCAGAAGAGTTTCTTAAGCTC
TATGGTTGGACGACTGAAAGAGCTCTTGTCTTTACAAAAGTAACAACTGGAAGAAGCCCAATGATAGCAATAAGAGTGCA
GGGTTTAAAGCCTGCCATGGTAGTGCTTCATGGAGTAAAAAGACTCGATGAATTAGCCATAAAAATTGCAGAAAAAGAAA
GAGTCCCCTTGGTTGTCTCAAAAGCAGAGAGCGAAAGTGAATTAATTATGGGCCTGAGGAAACTAGTCGGGGCATTTTAA

Upstream 100 bases:

>100_bases
AACTAAAGCAGGATTTTGACATCCTAAAAAGCTTGTTAGAAAAACTAGGGATTTAGGCAATCGCCGAAATATTTATATTT
GACCAGGAAAATATAACTTC

Downstream 100 bases:

>100_bases
ATGTCAAGTTTTTCTTTTTTCCAGATTCCCCCCTCTGCAAGCTTCGTGAGCCTATCTCTAATGTGTATGAGAACCTCACT
CAAAACTTTTGAGTTATCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MLEKEKKILAKRIAGEIVLSPDPGKTMRKWREIFGISQSELAEYLGVSSSVISDYEGGRRKSPGASTIRKFVEALLEIDE
KRGGNVIRAFSRTLGGDIPTSAILDIREFNIPVTVKDIVNAVKGEIVANPDLIDRKIYGYTIVDSIQAILEMSAEEFLKL
YGWTTERALVFTKVTTGRSPMIAIRVQGLKPAMVVLHGVKRLDELAIKIAEKERVPLVVSKAESESELIMGLRKLVGAF

Sequences:

>Translated_239_residues
MLEKEKKILAKRIAGEIVLSPDPGKTMRKWREIFGISQSELAEYLGVSSSVISDYEGGRRKSPGASTIRKFVEALLEIDE
KRGGNVIRAFSRTLGGDIPTSAILDIREFNIPVTVKDIVNAVKGEIVANPDLIDRKIYGYTIVDSIQAILEMSAEEFLKL
YGWTTERALVFTKVTTGRSPMIAIRVQGLKPAMVVLHGVKRLDELAIKIAEKERVPLVVSKAESESELIMGLRKLVGAF
>Mature_239_residues
MLEKEKKILAKRIAGEIVLSPDPGKTMRKWREIFGISQSELAEYLGVSSSVISDYEGGRRKSPGASTIRKFVEALLEIDE
KRGGNVIRAFSRTLGGDIPTSAILDIREFNIPVTVKDIVNAVKGEIVANPDLIDRKIYGYTIVDSIQAILEMSAEEFLKL
YGWTTERALVFTKVTTGRSPMIAIRVQGLKPAMVVLHGVKRLDELAIKIAEKERVPLVVSKAESESELIMGLRKLVGAF

Specific function: Unknown

COG id: COG1709

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR017271
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 26442; Mature: 26442

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKEKKILAKRIAGEIVLSPDPGKTMRKWREIFGISQSELAEYLGVSSSVISDYEGGRR
CCCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHCCCCCC
KSPGASTIRKFVEALLEIDEKRGGNVIRAFSRTLGGDIPTSAILDIREFNIPVTVKDIVN
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEHHHHHH
AVKGEIVANPDLIDRKIYGYTIVDSIQAILEMSAEEFLKLYGWTTERALVFTKVTTGRSP
HHCCCEECCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCC
MIAIRVQGLKPAMVVLHGVKRLDELAIKIAEKERVPLVVSKAESESELIMGLRKLVGAF
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLEKEKKILAKRIAGEIVLSPDPGKTMRKWREIFGISQSELAEYLGVSSSVISDYEGGRR
CCCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHCCCCCC
KSPGASTIRKFVEALLEIDEKRGGNVIRAFSRTLGGDIPTSAILDIREFNIPVTVKDIVN
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEHHHHHH
AVKGEIVANPDLIDRKIYGYTIVDSIQAILEMSAEEFLKLYGWTTERALVFTKVTTGRSP
HHCCCEECCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCC
MIAIRVQGLKPAMVVLHGVKRLDELAIKIAEKERVPLVVSKAESESELIMGLRKLVGAF
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]