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The map label for this gene is pyrF [H]

Identifier: 189499095

GI number: 189499095

Start: 95138

End: 95962

Strand: Direct

Name: pyrF [H]

Synonym: Cphamn1_0101

Alternate gene names: 189499095

Gene position: 95138-95962 (Clockwise)

Preceding gene: 189499084

Following gene: 189499096

Centisome position: 3.48

GC content: 50.18

Gene sequence:

>825_bases
ATGAATGCAGCTCGAAACAAGGTCAATGACCGGATTTCAACCACGAAGTCTCTCTTGTGTGTCGGTCTTGACAGCGATCA
GAATAGGATTCCTGAACTGTACCGGTCAATGGAGCGTCCTGTTCTGGAGTTTAACCGCTCTGTGATCAAGGCGACAAAGG
AACATGCGGTAGCGTATAAGATAAATACCGCGTTTTATGAGGCAAGAGGCCTCGAAGGTATTCAGGATATGCAGGACACG
CTGGACCTGCTTCCACCGGACTGCCTCTCTATCGCTGATGCAAAACGAGCCGATATCGGAAACACCAGCAGGAAATATGC
GCAGGCTTTTTTTGAGCACTGGGATTTCGACGCGCTTACCGTAGCTCCATATATGGGATTCGATTCTCTTGAGCCGTTTT
TCGCATATGATCAGAAACTGATTTTTGTACTGTGCCTGACTTCCAATTCCGGCTCCGCCGATTTTGAGGAAAAACAGTTG
CAGTCCGGGGAAACCCTCTATGAGAGTGTTCTGGCCAGAGTGCAGGAGTGGGACAGGAACGGCAATGCGGGAGTTGTTAT
AGGAGCAACGAAAAGCAGTCAGTTGAGGGATCTTCGCAGGGCGGCGCCGGGACTGTTTTTTCTTATCCCCGGTGTCGGCG
CTCAGGGCGGTTCACTCAGGGATTCAGCTACTCTCGGAGTGGATGAAAACCTCCAGGGTGCGTTGATAAATGTCAGTAGG
GGGATTATTTATCCTGACGGGAACTTTGATTCGGTTGACGTGTTCGAGGACTCAGTGAGCCGGAAAGCGGAGGCGCTTCA
TGATGAGATGCTGAAAATTTTTTGA

Upstream 100 bases:

>100_bases
TCGTTTGTGTTTTTTAAGTCTATTGTGTAGATAGTTTTTTGATGCGGTTAAGGGATTTTTGCGTACTGATACCTGTAAAG
TAAAACCTGTCAACATATTT

Downstream 100 bases:

>100_bases
CAGCTGCCGGCGCTTTTTCTCTGTTCAAATAAACTAGTGTTCATGTGTGGAATAGTTGGATATATCGGCCATCGTGATGC
GGCGGGGTTGCTCTTGAACG

Product: orotidine 5'-phosphate decarboxylase

Products: NA

Alternate protein names: OMP decarboxylase; OMPDCase; OMPdecase [H]

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MNAARNKVNDRISTTKSLLCVGLDSDQNRIPELYRSMERPVLEFNRSVIKATKEHAVAYKINTAFYEARGLEGIQDMQDT
LDLLPPDCLSIADAKRADIGNTSRKYAQAFFEHWDFDALTVAPYMGFDSLEPFFAYDQKLIFVLCLTSNSGSADFEEKQL
QSGETLYESVLARVQEWDRNGNAGVVIGATKSSQLRDLRRAAPGLFFLIPGVGAQGGSLRDSATLGVDENLQGALINVSR
GIIYPDGNFDSVDVFEDSVSRKAEALHDEMLKIF

Sequences:

>Translated_274_residues
MNAARNKVNDRISTTKSLLCVGLDSDQNRIPELYRSMERPVLEFNRSVIKATKEHAVAYKINTAFYEARGLEGIQDMQDT
LDLLPPDCLSIADAKRADIGNTSRKYAQAFFEHWDFDALTVAPYMGFDSLEPFFAYDQKLIFVLCLTSNSGSADFEEKQL
QSGETLYESVLARVQEWDRNGNAGVVIGATKSSQLRDLRRAAPGLFFLIPGVGAQGGSLRDSATLGVDENLQGALINVSR
GIIYPDGNFDSVDVFEDSVSRKAEALHDEMLKIF
>Mature_274_residues
MNAARNKVNDRISTTKSLLCVGLDSDQNRIPELYRSMERPVLEFNRSVIKATKEHAVAYKINTAFYEARGLEGIQDMQDT
LDLLPPDCLSIADAKRADIGNTSRKYAQAFFEHWDFDALTVAPYMGFDSLEPFFAYDQKLIFVLCLTSNSGSADFEEKQL
QSGETLYESVLARVQEWDRNGNAGVVIGATKSSQLRDLRRAAPGLFFLIPGVGAQGGSLRDSATLGVDENLQGALINVSR
GIIYPDGNFDSVDVFEDSVSRKAEALHDEMLKIF

Specific function: Unknown

COG id: COG0284

COG function: function code F; Orotidine-5'-phosphate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OMP decarboxylase family. Type 2 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011995
- InterPro:   IPR001754
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00215 OMPdecase [H]

EC number: =4.1.1.23 [H]

Molecular weight: Translated: 30393; Mature: 30393

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAARNKVNDRISTTKSLLCVGLDSDQNRIPELYRSMERPVLEFNRSVIKATKEHAVAYK
CCCHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCEEEEE
INTAFYEARGLEGIQDMQDTLDLLPPDCLSIADAKRADIGNTSRKYAQAFFEHWDFDALT
EEHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHCCHHCCCCCHHHHHHHHHHHHCCCCCEE
VAPYMGFDSLEPFFAYDQKLIFVLCLTSNSGSADFEEKQLQSGETLYESVLARVQEWDRN
EECCCCCCCCCHHHHHCCEEEEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCC
GNAGVVIGATKSSQLRDLRRAAPGLFFLIPGVGAQGGSLRDSATLGVDENLQGALINVSR
CCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
GIIYPDGNFDSVDVFEDSVSRKAEALHDEMLKIF
CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNAARNKVNDRISTTKSLLCVGLDSDQNRIPELYRSMERPVLEFNRSVIKATKEHAVAYK
CCCHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCEEEEE
INTAFYEARGLEGIQDMQDTLDLLPPDCLSIADAKRADIGNTSRKYAQAFFEHWDFDALT
EEHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHCCHHCCCCCHHHHHHHHHHHHCCCCCEE
VAPYMGFDSLEPFFAYDQKLIFVLCLTSNSGSADFEEKQLQSGETLYESVLARVQEWDRN
EECCCCCCCCCHHHHHCCEEEEEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCC
GNAGVVIGATKSSQLRDLRRAAPGLFFLIPGVGAQGGSLRDSATLGVDENLQGALINVSR
CCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
GIIYPDGNFDSVDVFEDSVSRKAEALHDEMLKIF
CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA