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The map label for this gene is msrB [H]

Identifier: 189499084

GI number: 189499084

Start: 84605

End: 85177

Strand: Direct

Name: msrB [H]

Synonym: Cphamn1_0090

Alternate gene names: 189499084

Gene position: 84605-85177 (Clockwise)

Preceding gene: 189499080

Following gene: 189499095

Centisome position: 3.09

GC content: 51.48

Gene sequence:

>573_bases
ATGCATAGTACTGTCAGATGTCTTAAAGCTCCACAAGCAGTGCTTTTTCTTTTGCTGATGCTTCCAGCTCTACTGGCAGG
TTGCGGCGGAGCCACCTTTCCTGAAAACGAAAAGGATGATTCCATGATTTCAAAACAGGAAAAACCGGGTAACCCCTACT
ATTCGAGAACAGATACAACAACGCTCGATCTGCCGGATTCGGTCTGGGCAAAGGTCTTGACGAAAGAGGTCTACCGGGTC
GCACGGCAAAAAGAGACCGAACAGGCGTTTTCAGGGAAATTCCTGGATTTTGAAGGCAGGGGGAGCTATTTTTGTGCGGC
GTGCGGTAATGCGTTGTTTCGCTCAGATGCGAAATTTGCCGATACCTGCGGCTGGCCGAGTTTTTTCGAGCCGGTACGCG
AGAAGAGTATTTTCTATCAGCCTGACACCTCGCATGGGCTGGTGAGGACAGAGGTGATCTGCGGACGCTGCGGTGCACAT
CTCGGCCATGTCTTCGATGACGGCCCCCCTCCTACCGGAAAGAGGTTTTGTATGAACTCGATCGTGCTTGATTTTGAGCC
TGACGGAGAGTGA

Upstream 100 bases:

>100_bases
GTTACACCTGTGTTCAGATAGTCACAGGAAGCTACATTTTTTTTCTAATTTTATTAAAGAGCTTCAGCGACTACGCAATA
CAACCATGGGAGGGCTGAGT

Downstream 100 bases:

>100_bases
CTGCCGGAAGTGATTATCAGAGCGTCATTCAGACTTCGTTGCGTCTTTTTCCTTCTTTTTGAATTCAACGACAAGCCATT
TCTCTTTATAGTTTGCGCTG

Product: methionine-R-sulfoxide reductase

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MHSTVRCLKAPQAVLFLLLMLPALLAGCGGATFPENEKDDSMISKQEKPGNPYYSRTDTTTLDLPDSVWAKVLTKEVYRV
ARQKETEQAFSGKFLDFEGRGSYFCAACGNALFRSDAKFADTCGWPSFFEPVREKSIFYQPDTSHGLVRTEVICGRCGAH
LGHVFDDGPPPTGKRFCMNSIVLDFEPDGE

Sequences:

>Translated_190_residues
MHSTVRCLKAPQAVLFLLLMLPALLAGCGGATFPENEKDDSMISKQEKPGNPYYSRTDTTTLDLPDSVWAKVLTKEVYRV
ARQKETEQAFSGKFLDFEGRGSYFCAACGNALFRSDAKFADTCGWPSFFEPVREKSIFYQPDTSHGLVRTEVICGRCGAH
LGHVFDDGPPPTGKRFCMNSIVLDFEPDGE
>Mature_190_residues
MHSTVRCLKAPQAVLFLLLMLPALLAGCGGATFPENEKDDSMISKQEKPGNPYYSRTDTTTLDLPDSVWAKVLTKEVYRV
ARQKETEQAFSGKFLDFEGRGSYFCAACGNALFRSDAKFADTCGWPSFFEPVREKSIFYQPDTSHGLVRTEVICGRCGAH
LGHVFDDGPPPTGKRFCMNSIVLDFEPDGE

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI301336164, Length=117, Percent_Identity=47.8632478632479, Blast_Score=124, Evalue=7e-29,
Organism=Homo sapiens, GI301336162, Length=117, Percent_Identity=47.8632478632479, Blast_Score=124, Evalue=7e-29,
Organism=Homo sapiens, GI73089054, Length=117, Percent_Identity=47.8632478632479, Blast_Score=124, Evalue=7e-29,
Organism=Homo sapiens, GI37620216, Length=117, Percent_Identity=47.8632478632479, Blast_Score=123, Evalue=8e-29,
Organism=Homo sapiens, GI117606353, Length=136, Percent_Identity=46.3235294117647, Blast_Score=120, Evalue=5e-28,
Organism=Homo sapiens, GI7706511, Length=91, Percent_Identity=40.6593406593407, Blast_Score=68, Evalue=4e-12,
Organism=Escherichia coli, GI1788077, Length=120, Percent_Identity=50, Blast_Score=122, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17553450, Length=126, Percent_Identity=50.7936507936508, Blast_Score=127, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI115532676, Length=126, Percent_Identity=50.7936507936508, Blast_Score=127, Evalue=4e-30,
Organism=Saccharomyces cerevisiae, GI6319816, Length=142, Percent_Identity=37.3239436619718, Blast_Score=98, Evalue=7e-22,
Organism=Drosophila melanogaster, GI221378664, Length=116, Percent_Identity=44.8275862068966, Blast_Score=109, Evalue=1e-24,
Organism=Drosophila melanogaster, GI221378662, Length=123, Percent_Identity=43.0894308943089, Blast_Score=107, Evalue=7e-24,
Organism=Drosophila melanogaster, GI45553335, Length=116, Percent_Identity=41.3793103448276, Blast_Score=100, Evalue=6e-22,
Organism=Drosophila melanogaster, GI21356369, Length=116, Percent_Identity=41.3793103448276, Blast_Score=100, Evalue=6e-22,
Organism=Drosophila melanogaster, GI24645799, Length=116, Percent_Identity=41.3793103448276, Blast_Score=100, Evalue=8e-22,
Organism=Drosophila melanogaster, GI24645804, Length=127, Percent_Identity=37.7952755905512, Blast_Score=96, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24645801, Length=127, Percent_Identity=37.7952755905512, Blast_Score=96, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 21062; Mature: 21062

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSTVRCLKAPQAVLFLLLMLPALLAGCGGATFPENEKDDSMISKQEKPGNPYYSRTDTT
CCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCE
TLDLPDSVWAKVLTKEVYRVARQKETEQAFSGKFLDFEGRGSYFCAACGNALFRSDAKFA
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEHHHHHHHHHHCCCCHH
DTCGWPSFFEPVREKSIFYQPDTSHGLVRTEVICGRCGAHLGHVFDDGPPPTGKRFCMNS
HHCCCHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
IVLDFEPDGE
EEEECCCCCC
>Mature Secondary Structure
MHSTVRCLKAPQAVLFLLLMLPALLAGCGGATFPENEKDDSMISKQEKPGNPYYSRTDTT
CCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCE
TLDLPDSVWAKVLTKEVYRVARQKETEQAFSGKFLDFEGRGSYFCAACGNALFRSDAKFA
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEHHHHHHHHHHCCCCHH
DTCGWPSFFEPVREKSIFYQPDTSHGLVRTEVICGRCGAHLGHVFDDGPPPTGKRFCMNS
HHCCCHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
IVLDFEPDGE
EEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA