Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

Click here to switch to the map view.

The map label for this gene is 189184762

Identifier: 189184762

GI number: 189184762

Start: 1886203

End: 1887249

Strand: Reverse

Name: 189184762

Synonym: OTT_1855

Alternate gene names: NA

Gene position: 1887249-1886203 (Counterclockwise)

Preceding gene: 189184763

Following gene: 189184761

Centisome position: 93.94

GC content: 31.04

Gene sequence:

>1047_bases
TTGAAGTTTAAATATACGGAATCTGATGATTTTATAGAAATTGAGTTAGTAGGAAATGAAAAAGAAAATCAACAGCAACA
ACAGAATTTGAATTCCTATGAGCTTAGTGATTTTAGCAATAAAAAGCTATCAAACAAGGATTATGAGCAAAATAGTGAGT
TAGTAACTCCAGTTATTACTAAGGATTTAGAGGTTGAAAAGAATAAATGCTGTCCCAAAAGAAAAAGACTAGCAGATTAT
TATCCACTAACACCAGAAGATGCAGTTATACTGCAACGTATGTCTAGTAGAAGCTTCAACATATACTTCATAAATCAATT
ACTGTTGAAGTTATCAAGTAAATATCCAAATCGTCATTTTGTAAATAAGATAGCAGTGCTAAACTATATGGCAAAAGCGT
TAGCAAATGAATTACTAACTACTGAGCAGGCTAATAGTGGAAATTTTAGATTTAATGATGTAGGAAGATTTAAAGAACAG
TATCTAGCAAATATTGAATCTGGTACAGATCGTAGTATGAAGGCTCAGTTGAAGCGTAAAATAGCTGGAGTCTTTGAAGC
AGATACTGCTTATCAAATTTTAACATCTTGTGATTTTGTAGCAGCGGTTAAAAACAAATATTACATCAAGTTGCTTAAAA
ATATCACACTAACAGAATGTGACGAATCAAAGATATTACAAGCTGTACAAGATGTATATGGATACGAAATTCAAGAATTG
CAAGTTACACCATTTGAGCAACTCAAAACTGTTTCACAGAAACAAATCAATGAAGAAGAGTATCTCTTGAATCTCAGTAA
ACAACTGGGCTCTAACTCGACTTGGTACAAAGTACGAGAATCTTTGATTAAAAGATATGGTCAAGCTATCGATAAATCAT
GGTTTAGTCCATTGAAAGTTGTAAATGAAGATAATGTTAATAAAAAAATATTCATTAAAGCAAAAACAGAATTTGCAGAT
GATTACATTAGAAACAACTGTATGCAAGGTCTTGAATATGCTTTTAAAGCTCAAGGATTTTCTTTTGAGTTAGTTAAGTT
CGAATAA

Upstream 100 bases:

>100_bases
TAGATATAATAATAATAAAAAAAATAATAATAGATCTAGATCTACTGAAGATAAGTTAATAGAGAATGATCAAAATAAAA
ATGAAGATCAACAGCAAAAT

Downstream 100 bases:

>100_bases
TTTTAATAAAATTTAAAGGGTGATATGGAAAAAGATCTTGCAAAGATTGCTCCAAGTAATATTCAGGCAGAGCAAATGAT
ACTTGGGGCAATTCTGATTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MKFKYTESDDFIEIELVGNEKENQQQQQNLNSYELSDFSNKKLSNKDYEQNSELVTPVITKDLEVEKNKCCPKRKRLADY
YPLTPEDAVILQRMSSRSFNIYFINQLLLKLSSKYPNRHFVNKIAVLNYMAKALANELLTTEQANSGNFRFNDVGRFKEQ
YLANIESGTDRSMKAQLKRKIAGVFEADTAYQILTSCDFVAAVKNKYYIKLLKNITLTECDESKILQAVQDVYGYEIQEL
QVTPFEQLKTVSQKQINEEEYLLNLSKQLGSNSTWYKVRESLIKRYGQAIDKSWFSPLKVVNEDNVNKKIFIKAKTEFAD
DYIRNNCMQGLEYAFKAQGFSFELVKFE

Sequences:

>Translated_348_residues
MKFKYTESDDFIEIELVGNEKENQQQQQNLNSYELSDFSNKKLSNKDYEQNSELVTPVITKDLEVEKNKCCPKRKRLADY
YPLTPEDAVILQRMSSRSFNIYFINQLLLKLSSKYPNRHFVNKIAVLNYMAKALANELLTTEQANSGNFRFNDVGRFKEQ
YLANIESGTDRSMKAQLKRKIAGVFEADTAYQILTSCDFVAAVKNKYYIKLLKNITLTECDESKILQAVQDVYGYEIQEL
QVTPFEQLKTVSQKQINEEEYLLNLSKQLGSNSTWYKVRESLIKRYGQAIDKSWFSPLKVVNEDNVNKKIFIKAKTEFAD
DYIRNNCMQGLEYAFKAQGFSFELVKFE
>Mature_348_residues
MKFKYTESDDFIEIELVGNEKENQQQQQNLNSYELSDFSNKKLSNKDYEQNSELVTPVITKDLEVEKNKCCPKRKRLADY
YPLTPEDAVILQRMSSRSFNIYFINQLLLKLSSKYPNRHFVNKIAVLNYMAKALANELLTTEQANSGNFRFNDVGRFKEQ
YLANIESGTDRSMKAQLKRKIAGVFEADTAYQILTSCDFVAAVKNKYYIKLLKNITLTECDESKILQAVQDVYGYEIQEL
QVTPFEQLKTVSQKQINEEEYLLNLSKQLGSNSTWYKVRESLIKRYGQAIDKSWFSPLKVVNEDNVNKKIFIKAKTEFAD
DYIRNNCMQGLEYAFKAQGFSFELVKFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40557; Mature: 40557

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKYTESDDFIEIELVGNEKENQQQQQNLNSYELSDFSNKKLSNKDYEQNSELVTPVIT
CCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCEECHHHH
KDLEVEKNKCCPKRKRLADYYPLTPEDAVILQRMSSRSFNIYFINQLLLKLSSKYPNRHF
CCCCCCHHCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCHHH
VNKIAVLNYMAKALANELLTTEQANSGNFRFNDVGRFKEQYLANIESGTDRSMKAQLKRK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHH
IAGVFEADTAYQILTSCDFVAAVKNKYYIKLLKNITLTECDESKILQAVQDVYGYEIQEL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEEEE
QVTPFEQLKTVSQKQINEEEYLLNLSKQLGSNSTWYKVRESLIKRYGQAIDKSWFSPLKV
ECCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH
VNEDNVNKKIFIKAKTEFADDYIRNNCMQGLEYAFKAQGFSFELVKFE
HCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
>Mature Secondary Structure
MKFKYTESDDFIEIELVGNEKENQQQQQNLNSYELSDFSNKKLSNKDYEQNSELVTPVIT
CCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCEECHHHH
KDLEVEKNKCCPKRKRLADYYPLTPEDAVILQRMSSRSFNIYFINQLLLKLSSKYPNRHF
CCCCCCHHCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCHHH
VNKIAVLNYMAKALANELLTTEQANSGNFRFNDVGRFKEQYLANIESGTDRSMKAQLKRK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHH
IAGVFEADTAYQILTSCDFVAAVKNKYYIKLLKNITLTECDESKILQAVQDVYGYEIQEL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEEEEE
QVTPFEQLKTVSQKQINEEEYLLNLSKQLGSNSTWYKVRESLIKRYGQAIDKSWFSPLKV
ECCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH
VNEDNVNKKIFIKAKTEFADDYIRNNCMQGLEYAFKAQGFSFELVKFE
HCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA