Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184741

Identifier: 189184741

GI number: 189184741

Start: 1866236

End: 1868908

Strand: Reverse

Name: 189184741

Synonym: OTT_1834

Alternate gene names: NA

Gene position: 1868908-1866236 (Counterclockwise)

Preceding gene: 189184742

Following gene: 189184740

Centisome position: 93.03

GC content: 33.3

Gene sequence:

>2673_bases
ATGACTGACAAAATCAATGATTCAAATAATTTCAATAACATTCATAATTCAAAAACAGATATAGAAAATTCTAAAGCTAA
CAGCTTGAACCACAACGTGGCTGTAAAGTTGATAAATGGTGATATTGTTGATGGTATAGTGCTACTTAGTGATAATAATA
GCTTGAGAGCTGATAACACTCTGAAAGAATCAATAAACCAATTAATCAATGATTGGAAAAATAGTAAATTTGAGCCGCAG
GATCGTTTGATAATTGCTGGCCATAAGGAAGCTGAAAATATTAATCAAAACATCAGAAATTACATGAAGGAAAATGGTGC
TCTGAAAGGTCCAGAATACAGCATTTTAATTTCAGGAGCCGAATCAAAAAAATATGCTAACTACATGGCTGGAGATAGAA
TTGTCTTTCAGGCAAGCAATAAGGATTTACAAATACAAAACAGTGAATTTGCAACGCTAGTATCAATTGATGAAAATAAG
TTTGTAGCTAAGACAGATACAGGAAACGAGGTAAGCTTTGATTTGAATAAAATAAGCTTTAAACATGGATATGCTACGAC
AATTTGTAACCCACAAACAGCTTTCAAAAAAGATGTATATGTTCTTCATAATGATGGTGTAGGTATAGAAAGTTCTAACA
TAAGCATGATAGGGAATGCAGAGCAAGTACGGTTGTACTACAACATGCAAGCTACAAAAAATGTTGCTAACCTGATAGAG
CAGCTTAGCACAGCTAAGGCAAACTCTATGAATTCAAAAGTTGTAGAGGAAAATAATAATGTTCAAGCAAATGAAGTAAG
GCAATATCAATCGGCTCAAAACTATAGACAAAACGATTATTATTCAAATAGCCAGGAAGAACTACGAGAATTGAAGGATC
AAATAGCTAGTAGAGCTGAAACTATAGCTTGTGAGCTTCTTGGAAAGCCAAATGAGCACCTATCTAAAAACGAAAGGATG
CGTTGGGGAAACCATGGCAAAATAGTAGTAAACATTAGTGGCAATCGTGCTGGAAAATGGTATGATTTTAGCGCAGGAGA
AGGTGGTGATTTATTCTCCCTGGTTCAAAGAGAAAGAGGATACAGCTTTTTTGACGCAAAGGAATATTTGAAAAGCGTCG
TTGGAATGTCTAATATTAGCCAACGGTATCAGAGACAGCCTAGGACTAACGATTCTCAACAATACATTCAACAACCTGAA
AGTATTAAAATTGCAAATGTTCAAAACTTGTATGAACGATCAAGCAAGATACATGGTTATGAGATAGATAAGAACCCACA
TGCAGAAGTAGTAAACAAGTATCTTGAAAATCGTGGTATTACTTTTGACAAAAGCACTGCAAGTTCAGACTTAAAAGCAA
GTATACTGTTTGATACTCAAACGAGAGAAAATTATCCAGCATTTACAGCTTTTGCAAGAAATGCAAAAGGAGAAATTACC
GGAGTACAGGCTGTATATCTAAATCCAGAAACAGGATATAAGGCAGATGTTTCAATTAACAGAAGATCTTTCGGTAAAAT
CAGCGGATCGTTCATAACAATAGCAAAACGAAATGTGAATGACCCTAATATAACAATTATAGCAGAAGGCGCTGAAACAG
CGTTGAGCTTACAGCAAGCGGGCATTAAAGGCAATATCATTGCTAGTGCTGGAATTTCGAATTTGACAAATTATTCACCA
TTCCCAGGTGAAAAAATCATCATTGCAGCAGATAATGATGGAAAAAATTCTCTAACTAATAATACTGTAATCAAATTTGC
AAAAATATTAGAAATGAAGGAAGCGATAACTTGTATAGTCAAACCACAAGAAAATGGTGATTTTAATAATCTGCTGCAAA
CTTGTGGAGCTCAGTCAATTAGAGACATTATAGAACCTGAAATTACTAAACTGACTAAAGCAGTTGAAGCAACCAAACTT
ACTCAAACAGAAAATAATAGTATAGAAAAACAAAATGATATTACGAATGTTAAAGAATTGTATAATAAATCTTCATCTCT
ATACTATTTAAAACAAGAAGAGGAGGCAAAACTGGAAGCGATAGTAGCGAATAAATATCTAGAAAACCATACAGAAATTT
ATAGTTCAAAAATCTTTGATAATCCTAATTTAAGATCAAATATGGTTTTTGATGAAAAAACTCAAAAATCCTGGCCTGCA
CTTACTGTTTTTGTTAAAAATGAAAAAGGCGAAATTACTGGAGCTAAGATATTAGCCTTGAATTCAAAAACATGTAATAA
AGCGGATGTAGCTGAAAAATCTGTTGGTACAATTAGTGGATCATTTGCTGAAATTGCTCAACAAAATTCAAAATACTCAC
CTGTAACAATCATTACAAAGGATATTGAAACAGCGTTAACCATTCGGCAAGCTGGAGTCGAAGGAAAAATCTTATGTGCA
ATTGAAGCCGAAAATTTGCAAAACTATAATCCTGGCTCAAAAGAAAAGATCATTCTAGCAGTTAAAAATGACGTAAATAC
TGAAAAAGCAGAAAAAGTTTTGGAGGATAAAGGAGCAATAGTCTGCACAGTCAAAAATGACTTCAATAATGTATTAAAAA
CTCAAGGGTTATATGCTGTTAGAAATATTATCAGCCCTGAAATAAGAAAACTTACTGAAAAAAATGAATCAATACAAACT
AACATACAACCAAGATTATGTCTGAAAATTTAA

Upstream 100 bases:

>100_bases
ATCTCAATAATCACTTAGCAATAAAATTATAATTCAAACGGTAAAAATATCAAATATTTATACCGCAAAACAATTTAGTG
ACGCGAAGGTGAGGTTTTAT

Downstream 100 bases:

>100_bases
AACACGATGGGCTATTTAAAGATTTAATGAATGATCCAAAAGCAGCTCTGGATTTCATAAATGACTTTTTACCAAATGAA
GTTAAAAACGTACTAGATTT

Product: putative conjugative transfer protein TraI

Products: NA

Alternate protein names: Conjugative Transfer Protein TraA; Conjugal Transfer Protein TraA; Conjugal Transfer Relaxase TraA; Conjugal Transfer Protein; MobA/MobL Family Protein; MobA/MobL Protein; Conjugative Transfer Relaxase Protein TraI; Protein TraI; DNA Helicase

Number of amino acids: Translated: 890; Mature: 889

Protein sequence:

>890_residues
MTDKINDSNNFNNIHNSKTDIENSKANSLNHNVAVKLINGDIVDGIVLLSDNNSLRADNTLKESINQLINDWKNSKFEPQ
DRLIIAGHKEAENINQNIRNYMKENGALKGPEYSILISGAESKKYANYMAGDRIVFQASNKDLQIQNSEFATLVSIDENK
FVAKTDTGNEVSFDLNKISFKHGYATTICNPQTAFKKDVYVLHNDGVGIESSNISMIGNAEQVRLYYNMQATKNVANLIE
QLSTAKANSMNSKVVEENNNVQANEVRQYQSAQNYRQNDYYSNSQEELRELKDQIASRAETIACELLGKPNEHLSKNERM
RWGNHGKIVVNISGNRAGKWYDFSAGEGGDLFSLVQRERGYSFFDAKEYLKSVVGMSNISQRYQRQPRTNDSQQYIQQPE
SIKIANVQNLYERSSKIHGYEIDKNPHAEVVNKYLENRGITFDKSTASSDLKASILFDTQTRENYPAFTAFARNAKGEIT
GVQAVYLNPETGYKADVSINRRSFGKISGSFITIAKRNVNDPNITIIAEGAETALSLQQAGIKGNIIASAGISNLTNYSP
FPGEKIIIAADNDGKNSLTNNTVIKFAKILEMKEAITCIVKPQENGDFNNLLQTCGAQSIRDIIEPEITKLTKAVEATKL
TQTENNSIEKQNDITNVKELYNKSSSLYYLKQEEEAKLEAIVANKYLENHTEIYSSKIFDNPNLRSNMVFDEKTQKSWPA
LTVFVKNEKGEITGAKILALNSKTCNKADVAEKSVGTISGSFAEIAQQNSKYSPVTIITKDIETALTIRQAGVEGKILCA
IEAENLQNYNPGSKEKIILAVKNDVNTEKAEKVLEDKGAIVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLTEKNESIQT
NIQPRLCLKI

Sequences:

>Translated_890_residues
MTDKINDSNNFNNIHNSKTDIENSKANSLNHNVAVKLINGDIVDGIVLLSDNNSLRADNTLKESINQLINDWKNSKFEPQ
DRLIIAGHKEAENINQNIRNYMKENGALKGPEYSILISGAESKKYANYMAGDRIVFQASNKDLQIQNSEFATLVSIDENK
FVAKTDTGNEVSFDLNKISFKHGYATTICNPQTAFKKDVYVLHNDGVGIESSNISMIGNAEQVRLYYNMQATKNVANLIE
QLSTAKANSMNSKVVEENNNVQANEVRQYQSAQNYRQNDYYSNSQEELRELKDQIASRAETIACELLGKPNEHLSKNERM
RWGNHGKIVVNISGNRAGKWYDFSAGEGGDLFSLVQRERGYSFFDAKEYLKSVVGMSNISQRYQRQPRTNDSQQYIQQPE
SIKIANVQNLYERSSKIHGYEIDKNPHAEVVNKYLENRGITFDKSTASSDLKASILFDTQTRENYPAFTAFARNAKGEIT
GVQAVYLNPETGYKADVSINRRSFGKISGSFITIAKRNVNDPNITIIAEGAETALSLQQAGIKGNIIASAGISNLTNYSP
FPGEKIIIAADNDGKNSLTNNTVIKFAKILEMKEAITCIVKPQENGDFNNLLQTCGAQSIRDIIEPEITKLTKAVEATKL
TQTENNSIEKQNDITNVKELYNKSSSLYYLKQEEEAKLEAIVANKYLENHTEIYSSKIFDNPNLRSNMVFDEKTQKSWPA
LTVFVKNEKGEITGAKILALNSKTCNKADVAEKSVGTISGSFAEIAQQNSKYSPVTIITKDIETALTIRQAGVEGKILCA
IEAENLQNYNPGSKEKIILAVKNDVNTEKAEKVLEDKGAIVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLTEKNESIQT
NIQPRLCLKI
>Mature_889_residues
TDKINDSNNFNNIHNSKTDIENSKANSLNHNVAVKLINGDIVDGIVLLSDNNSLRADNTLKESINQLINDWKNSKFEPQD
RLIIAGHKEAENINQNIRNYMKENGALKGPEYSILISGAESKKYANYMAGDRIVFQASNKDLQIQNSEFATLVSIDENKF
VAKTDTGNEVSFDLNKISFKHGYATTICNPQTAFKKDVYVLHNDGVGIESSNISMIGNAEQVRLYYNMQATKNVANLIEQ
LSTAKANSMNSKVVEENNNVQANEVRQYQSAQNYRQNDYYSNSQEELRELKDQIASRAETIACELLGKPNEHLSKNERMR
WGNHGKIVVNISGNRAGKWYDFSAGEGGDLFSLVQRERGYSFFDAKEYLKSVVGMSNISQRYQRQPRTNDSQQYIQQPES
IKIANVQNLYERSSKIHGYEIDKNPHAEVVNKYLENRGITFDKSTASSDLKASILFDTQTRENYPAFTAFARNAKGEITG
VQAVYLNPETGYKADVSINRRSFGKISGSFITIAKRNVNDPNITIIAEGAETALSLQQAGIKGNIIASAGISNLTNYSPF
PGEKIIIAADNDGKNSLTNNTVIKFAKILEMKEAITCIVKPQENGDFNNLLQTCGAQSIRDIIEPEITKLTKAVEATKLT
QTENNSIEKQNDITNVKELYNKSSSLYYLKQEEEAKLEAIVANKYLENHTEIYSSKIFDNPNLRSNMVFDEKTQKSWPAL
TVFVKNEKGEITGAKILALNSKTCNKADVAEKSVGTISGSFAEIAQQNSKYSPVTIITKDIETALTIRQAGVEGKILCAI
EAENLQNYNPGSKEKIILAVKNDVNTEKAEKVLEDKGAIVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLTEKNESIQTN
IQPRLCLKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 99371; Mature: 99239

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKINDSNNFNNIHNSKTDIENSKANSLNHNVAVKLINGDIVDGIVLLSDNNSLRADNT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCCCHH
LKESINQLINDWKNSKFEPQDRLIIAGHKEAENINQNIRNYMKENGALKGPEYSILISGA
HHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
ESKKYANYMAGDRIVFQASNKDLQIQNSEFATLVSIDENKFVAKTDTGNEVSFDLNKISF
CCCHHHHHCCCCEEEEEECCCCEEEECCCEEEEEEECCCEEEEECCCCCEEEEEHEEEEE
KHGYATTICNPQTAFKKDVYVLHNDGVGIESSNISMIGNAEQVRLYYNMQATKNVANLIE
CCCCEEEECCCCHHHCCCEEEEECCCCCEECCCEEEECCCEEEEEEEECHHHHHHHHHHH
QLSTAKANSMNSKVVEENNNVQANEVRQYQSAQNYRQNDYYSNSQEELRELKDQIASRAE
HHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
TIACELLGKPNEHLSKNERMRWGNHGKIVVNISGNRAGKWYDFSAGEGGDLFSLVQRERG
HEEHHHCCCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCHHHHHHHHHCC
YSFFDAKEYLKSVVGMSNISQRYQRQPRTNDSQQYIQQPESIKIANVQNLYERSSKIHGY
CCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHCCCCCEEEECHHHHHHHHCCCCCE
EIDKNPHAEVVNKYLENRGITFDKSTASSDLKASILFDTQTRENYPAFTAFARNAKGEIT
ECCCCCHHHHHHHHHHHCCCEEECCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCEE
GVQAVYLNPETGYKADVSINRRSFGKISGSFITIAKRNVNDPNITIIAEGAETALSLQQA
EEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHC
GIKGNIIASAGISNLTNYSPFPGEKIIIAADNDGKNSLTNNTVIKFAKILEMKEAITCIV
CCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHEEEEE
KPQENGDFNNLLQTCGAQSIRDIIEPEITKLTKAVEATKLTQTENNSIEKQNDITNVKEL
ECCCCCCHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
YNKSSSLYYLKQEEEAKLEAIVANKYLENHTEIYSSKIFDNPNLRSNMVFDEKTQKSWPA
HCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCE
LTVFVKNEKGEITGAKILALNSKTCNKADVAEKSVGTISGSFAEIAQQNSKYSPVTIITK
EEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEEC
DIETALTIRQAGVEGKILCAIEAENLQNYNPGSKEKIILAVKNDVNTEKAEKVLEDKGAI
CHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCE
VCTVKNDFNNVLKTQGLYAVRNIISPEIRKLTEKNESIQTNIQPRLCLKI
EEEECCCHHHHHHHCCHHHHHHHCCHHHHHHHHCCCCEECCCCCEEEEEC
>Mature Secondary Structure 
TDKINDSNNFNNIHNSKTDIENSKANSLNHNVAVKLINGDIVDGIVLLSDNNSLRADNT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCCCHH
LKESINQLINDWKNSKFEPQDRLIIAGHKEAENINQNIRNYMKENGALKGPEYSILISGA
HHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
ESKKYANYMAGDRIVFQASNKDLQIQNSEFATLVSIDENKFVAKTDTGNEVSFDLNKISF
CCCHHHHHCCCCEEEEEECCCCEEEECCCEEEEEEECCCEEEEECCCCCEEEEEHEEEEE
KHGYATTICNPQTAFKKDVYVLHNDGVGIESSNISMIGNAEQVRLYYNMQATKNVANLIE
CCCCEEEECCCCHHHCCCEEEEECCCCCEECCCEEEECCCEEEEEEEECHHHHHHHHHHH
QLSTAKANSMNSKVVEENNNVQANEVRQYQSAQNYRQNDYYSNSQEELRELKDQIASRAE
HHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
TIACELLGKPNEHLSKNERMRWGNHGKIVVNISGNRAGKWYDFSAGEGGDLFSLVQRERG
HEEHHHCCCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCHHHHHHHHHCC
YSFFDAKEYLKSVVGMSNISQRYQRQPRTNDSQQYIQQPESIKIANVQNLYERSSKIHGY
CCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHCCCCCEEEECHHHHHHHHCCCCCE
EIDKNPHAEVVNKYLENRGITFDKSTASSDLKASILFDTQTRENYPAFTAFARNAKGEIT
ECCCCCHHHHHHHHHHHCCCEEECCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCCEE
GVQAVYLNPETGYKADVSINRRSFGKISGSFITIAKRNVNDPNITIIAEGAETALSLQQA
EEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHC
GIKGNIIASAGISNLTNYSPFPGEKIIIAADNDGKNSLTNNTVIKFAKILEMKEAITCIV
CCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHEEEEE
KPQENGDFNNLLQTCGAQSIRDIIEPEITKLTKAVEATKLTQTENNSIEKQNDITNVKEL
ECCCCCCHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
YNKSSSLYYLKQEEEAKLEAIVANKYLENHTEIYSSKIFDNPNLRSNMVFDEKTQKSWPA
HCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCE
LTVFVKNEKGEITGAKILALNSKTCNKADVAEKSVGTISGSFAEIAQQNSKYSPVTIITK
EEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEEC
DIETALTIRQAGVEGKILCAIEAENLQNYNPGSKEKIILAVKNDVNTEKAEKVLEDKGAI
CHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCE
VCTVKNDFNNVLKTQGLYAVRNIISPEIRKLTEKNESIQTNIQPRLCLKI
EEEECCCHHHHHHHCCHHHHHHHCCHHHHHHHHCCCCEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA